RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SMG5Q9UPR3 1016 aaKnown RBP4.95□□□□□ -1.62
SGMS1-207ENST00000602619 PITPNM2Q9BZ72 1349 aa4.95□□□□□ -1.62
SGMS1-207ENST00000602619 ITGAEP38570 1179 aa4.94□□□□□ -1.62
SGMS1-207ENST00000602619 GDNFP39905 211 aa4.94□□□□□ -1.62
SGMS1-207ENST00000602619 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.94□□□□□ -1.62
SGMS1-207ENST00000602619 CRELD1Q96HD1 420 aa4.94□□□□□ -1.62
SGMS1-207ENST00000602619 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
SGMS1-207ENST00000602619 CARS2Q9HA77 564 aaKnown RBP4.94□□□□□ -1.62
SGMS1-207ENST00000602619 SSU72Q9NP77 194 aaKnown RBP4.94□□□□□ -1.62
SGMS1-207ENST00000602619 PODXL2Q9NZ53 605 aa4.94□□□□□ -1.62
SGMS1-207ENST00000602619 GTF2IRD1Q9UHL9 959 aa4.94□□□□□ -1.62
SGMS1-207ENST00000602619 TCAF2A6NFQ2 919 aa4.93□□□□□ -1.62
SGMS1-207ENST00000602619 FOXD2O60548 495 aaPredicted RBP4.93□□□□□ -1.62
SGMS1-207ENST00000602619 CTSHP09668 335 aa4.93□□□□□ -1.62
SGMS1-207ENST00000602619 EIF4BP23588 611 aaKnown RBP4.93□□□□□ -1.62
SGMS1-207ENST00000602619 FCGRTP55899 365 aa4.93□□□□□ -1.62
SGMS1-207ENST00000602619 FAAP100Q0VG06 881 aa4.93□□□□□ -1.62
SGMS1-207ENST00000602619 ZNF326Q5BKZ1 582 aaKnown RBP4.93□□□□□ -1.62
SGMS1-207ENST00000602619 PARD6AQ9NPB6 346 aa4.93□□□□□ -1.62
SGMS1-207ENST00000602619 DCP1AQ9NPI6 582 aaPredicted RBP4.93□□□□□ -1.62
SGMS1-207ENST00000602619 PPP4R2Q9NY27 417 aa4.93□□□□□ -1.62
SGMS1-207ENST00000602619 NUAK1O60285 661 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 GSTP1P09211 210 aaKnown RBP4.92□□□□□ -1.62
SGMS1-207ENST00000602619 USP17L7P0C7H9 530 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 GLDCP23378 1020 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 ST13P50502 369 aaKnown RBP4.92□□□□□ -1.62
SGMS1-207ENST00000602619 LINC00310P59036 64 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 DTHD1Q6ZMT9 781 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 RNF214Q8ND24 703 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 KCNN1Q92952 543 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 IRF2BPLQ9H1B7 796 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 EPB41L4BQ9H329 900 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 KRT82Q9NSB4 513 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 CACNA2D2Q9NY47 1150 aa4.92□□□□□ -1.62
SGMS1-207ENST00000602619 USP31Q70CQ4 1352 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 ENC1O14682 589 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 SORBS3O60504 671 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 CLCN7P51798 805 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 PSMD2Q13200 908 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 ZC3H12AQ5D1E8 599 aaKnown RBP4.91□□□□□ -1.62
SGMS1-207ENST00000602619 LDLRAD1Q5T700 205 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 DBX2Q6ZNG2 339 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 NECAB3Q96P71 396 aaPredicted RBP4.91□□□□□ -1.62
SGMS1-207ENST00000602619 ATP13A1Q9HD20 1204 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 PRDM10Q9NQV6 1147 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 SEMA3GQ9NS98 782 aa4.91□□□□□ -1.62
SGMS1-207ENST00000602619 A0A0G2JLL6 359 aaPredicted RBP4.9□□□□□ -1.63
SGMS1-207ENST00000602619 EOMESO95936 686 aa4.9□□□□□ -1.63
SGMS1-207ENST00000602619 XPCQ01831 940 aaPredicted RBP4.9□□□□□ -1.63
SGMS1-207ENST00000602619 SCARA3Q6AZY7 606 aa4.9□□□□□ -1.63
SGMS1-207ENST00000602619 SV2BQ7L1I2 683 aa4.9□□□□□ -1.63
SGMS1-207ENST00000602619 PDZD3Q86UT5 571 aa4.9□□□□□ -1.63
SGMS1-207ENST00000602619 HSPA12BQ96MM6 686 aa4.9□□□□□ -1.63
SGMS1-207ENST00000602619 FAM161BQ96MY7 647 aa4.9□□□□□ -1.63
SGMS1-207ENST00000602619 CEP44Q9C0F1 390 aa4.9□□□□□ -1.63
SGMS1-207ENST00000602619 TMEM39AQ9NV64 488 aa4.9□□□□□ -1.63
SGMS1-207ENST00000602619 GNAT3A8MTJ3 354 aa4.89□□□□□ -1.63
SGMS1-207ENST00000602619 BMP7P18075 431 aa4.89□□□□□ -1.63
SGMS1-207ENST00000602619 KRTAP10-2P60368 255 aa4.89□□□□□ -1.63
SGMS1-207ENST00000602619 ERVK-24P63145 666 aa4.89□□□□□ -1.63
SGMS1-207ENST00000602619 ZNF252P-AS1Q0IIN9 211 aa4.89□□□□□ -1.63
SGMS1-207ENST00000602619 KCNB2Q92953 911 aa4.89□□□□□ -1.63
SGMS1-207ENST00000602619 NOC4LQ9BVI4 516 aaKnown RBP4.89□□□□□ -1.63
SGMS1-207ENST00000602619 UNCXA6NJT0 531 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 MEI1Q5TIA1 1274 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 UBE3DQ7Z6J8 389 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 GGNQ86UU5 652 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 ABHD4Q8TB40 342 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 STK35Q8TDR2 534 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 SLC26A8Q96RN1 970 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 ZCCHC4Q9H5U6 513 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 KIAA1522Q9P206 1035 aaPredicted RBP4.88□□□□□ -1.63
SGMS1-207ENST00000602619 CNTNAP4Q9C0A0 1308 aa4.88□□□□□ -1.63
SGMS1-207ENST00000602619 PRR33A8MZF0 331 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 RECKO95980 971 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 BMP6P22004 513 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 NME2P22392 152 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 NTF4P34130 210 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 RPS26P62854 115 aaKnown RBP4.87□□□□□ -1.63
SGMS1-207ENST00000602619 PPP2R3AQ06190 1150 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 TAF1CQ15572 869 aaPredicted RBP4.87□□□□□ -1.63
SGMS1-207ENST00000602619 BCL11AQ9H165 835 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 MRS2Q9HD23 443 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 VTI1BQ9UEU0 232 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 GPN3Q9UHW5 284 aaPredicted RBP4.87□□□□□ -1.63
SGMS1-207ENST00000602619 AKAP2Q9Y2D5 859 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 ADAMTS20P59510 1910 aa4.87□□□□□ -1.63
SGMS1-207ENST00000602619 PAGE1O75459 146 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 CELA3AP09093 270 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 SRFP11831 508 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 ERVFC1P60507 584 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 HNRNPUQ00839 825 aaKnown RBP eCLIP4.86□□□□□ -1.63
SGMS1-207ENST00000602619 PPM1JQ5JR12 505 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 CDKAL1Q5VV42 579 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 TPTE2Q6XPS3 522 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 ERMP1Q7Z2K6 904 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 SULF2Q8IWU5 870 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 KCNC2Q96PR1 638 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 ALPK1Q96QP1 1244 aa4.86□□□□□ -1.63
SGMS1-207ENST00000602619 FOXQ1Q9C009 403 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms