RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 RRP1BQ14684 758 aaKnown RBP18.08■□□□□ 0.48
TRIM11-205ENST00000602308 METTL24Q5JXM2 366 aa18.08■□□□□ 0.48
TRIM11-205ENST00000602308 C1orf53Q5VUE5 145 aa18.08■□□□□ 0.48
TRIM11-205ENST00000602308 CCAR1Q8IX12 1150 aaKnown RBP18.08■□□□□ 0.48
TRIM11-205ENST00000602308 ARRDC4Q8NCT1 418 aa18.08■□□□□ 0.48
TRIM11-205ENST00000602308 TACC3Q9Y6A5 838 aa18.08■□□□□ 0.48
TRIM11-205ENST00000602308 FAM86C2PA6NEL3 165 aa18.07■□□□□ 0.48
TRIM11-205ENST00000602308 TBC1D12O60347 775 aa18.07■□□□□ 0.48
TRIM11-205ENST00000602308 CYP2C19P33261 490 aa18.07■□□□□ 0.48
TRIM11-205ENST00000602308 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
TRIM11-205ENST00000602308 ADCYAP1R1P41586 468 aa18.07■□□□□ 0.48
TRIM11-205ENST00000602308 KHSRPQ92945 711 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRIM11-205ENST00000602308 FERMT2Q96AC1 680 aa18.07■□□□□ 0.48
TRIM11-205ENST00000602308 OSBPL5Q9H0X9 879 aaPredicted RBP18.07■□□□□ 0.48
TRIM11-205ENST00000602308 CHD7Q9P2D1 2997 aa18.07■□□□□ 0.48
TRIM11-205ENST00000602308 KBTBD13C9JR72 458 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 F6X3S4 739 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 GRM8O00222 908 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 FPGSQ05932 587 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 ANO1Q5XXA6 986 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 TSR2Q969E8 191 aaKnown RBP18.06■□□□□ 0.48
TRIM11-205ENST00000602308 KAZALD1Q96I82 304 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 PAGR1Q9BTK6 254 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 TBC1D2Q9BYX2 928 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 NDUFB9Q9Y6M9 179 aa18.06■□□□□ 0.48
TRIM11-205ENST00000602308 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 USP17L5A8MUK1 530 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 KIAA0355O15063 1070 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 IGHA2P01877 340 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 LDHBP07195 334 aaKnown RBP18.05■□□□□ 0.48
TRIM11-205ENST00000602308 CLTBP09497 229 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 CYBAP13498 195 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 RAG1P15918 1043 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 FGFR2P21802 821 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 PICALMQ13492 652 aa18.05■□□□□ 0.48
TRIM11-205ENST00000602308 TWISTNBQ3B726 338 aaPredicted RBP18.05■□□□□ 0.48
TRIM11-205ENST00000602308 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
TRIM11-205ENST00000602308 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.05■□□□□ 0.48
TRIM11-205ENST00000602308 MYCNP04198 464 aaPredicted RBP18.04■□□□□ 0.48
TRIM11-205ENST00000602308 CAP2P40123 477 aa18.04■□□□□ 0.48
TRIM11-205ENST00000602308 ATP2B2Q01814 1243 aa18.04■□□□□ 0.48
TRIM11-205ENST00000602308 MTMR2Q13614 643 aa18.04■□□□□ 0.48
TRIM11-205ENST00000602308 CCDC129Q6ZRS4 1044 aa18.04■□□□□ 0.48
TRIM11-205ENST00000602308 NPLOC4Q8TAT6 608 aa18.04■□□□□ 0.48
TRIM11-205ENST00000602308 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.04■□□□□ 0.485e-7■■■□□ 16.8
TRIM11-205ENST00000602308 TSPYL2Q9H2G4 693 aaPredicted RBP18.04■□□□□ 0.48
TRIM11-205ENST00000602308 APAF1O14727 1248 aa18.03■□□□□ 0.48
TRIM11-205ENST00000602308 BACE1P56817 501 aa18.03■□□□□ 0.48
TRIM11-205ENST00000602308 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRIM11-205ENST00000602308 SUCLG2Q96I99 432 aa18.03■□□□□ 0.48
TRIM11-205ENST00000602308 PLXNA1Q9UIW2 1896 aa18.03■□□□□ 0.48
TRIM11-205ENST00000602308 GAKO14976 1311 aa18.02■□□□□ 0.48
TRIM11-205ENST00000602308 MYBBP1AQ9BQG0 1328 aaKnown RBP18.02■□□□□ 0.48
TRIM11-205ENST00000602308 HOXC6P09630 235 aa18.02■□□□□ 0.48
TRIM11-205ENST00000602308 IFIT1P09914 478 aaKnown RBP18.02■□□□□ 0.48
TRIM11-205ENST00000602308 PTPREP23469 700 aa18.02■□□□□ 0.48
TRIM11-205ENST00000602308 AAK1Q2M2I8 961 aa18.02■□□□□ 0.48
TRIM11-205ENST00000602308 AS3MTQ9HBK9 375 aa18.02■□□□□ 0.48
TRIM11-205ENST00000602308 CWC22Q9HCG8 908 aaKnown RBP18.02■□□□□ 0.48
TRIM11-205ENST00000602308 CACNA1AO00555 2505 aa18.01■□□□□ 0.47
TRIM11-205ENST00000602308 CNMDO75829 334 aa18.01■□□□□ 0.47
TRIM11-205ENST00000602308 LRRC41Q15345 812 aa18.01■□□□□ 0.47
TRIM11-205ENST00000602308 RASIP1Q5U651 963 aa18.01■□□□□ 0.47
TRIM11-205ENST00000602308 C16orf59Q7L2K0 433 aa18.01■□□□□ 0.47
TRIM11-205ENST00000602308 WDR18Q9BV38 432 aa18.01■□□□□ 0.47
TRIM11-205ENST00000602308 C9orf78Q9NZ63 289 aaPredicted RBP18.01■□□□□ 0.47
TRIM11-205ENST00000602308 TMOD4Q9NZQ9 345 aa18.01■□□□□ 0.47
TRIM11-205ENST00000602308 SLC15A5A6NIM6 579 aa18■□□□□ 0.47
TRIM11-205ENST00000602308 SMIM22K7EJ46 135 aa18■□□□□ 0.47
TRIM11-205ENST00000602308 PUM3Q15397 648 aaKnown RBP18■□□□□ 0.47
TRIM11-205ENST00000602308 MICALL1Q8N3F8 863 aa18■□□□□ 0.47
TRIM11-205ENST00000602308 TMEM39AQ9NV64 488 aa18■□□□□ 0.47
TRIM11-205ENST00000602308 ERC2O15083 957 aa17.99■□□□□ 0.47
TRIM11-205ENST00000602308 GLRX3O76003 335 aaKnown RBP17.99■□□□□ 0.47
TRIM11-205ENST00000602308 RALBP1Q15311 655 aa17.99■□□□□ 0.47
TRIM11-205ENST00000602308 KLHDC4Q8TBB5 520 aa17.99■□□□□ 0.47
TRIM11-205ENST00000602308 GTF3C2Q8WUA4 911 aaPredicted RBP17.99■□□□□ 0.47
TRIM11-205ENST00000602308 SALL1Q9NSC2 1324 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 SEPT4O43236 478 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 TLL1O43897 1013 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 PQBP1O60828 265 aaKnown RBP17.98■□□□□ 0.47
TRIM11-205ENST00000602308 JAG1P78504 1218 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 GRB14Q14449 540 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 TMEM240Q5SV17 173 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 WDR78Q5VTH9 848 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 NKX2-4Q9H2Z4 354 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 MYH13Q9UKX3 1938 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 ATAD5Q96QE3 1844 aa17.98■□□□□ 0.47
TRIM11-205ENST00000602308 BTDP43251 543 aa17.97■□□□□ 0.47
TRIM11-205ENST00000602308 NHLH1Q02575 133 aa17.97■□□□□ 0.47
TRIM11-205ENST00000602308 FAAP100Q0VG06 881 aa17.97■□□□□ 0.47
TRIM11-205ENST00000602308 FAM47AQ5JRC9 791 aa17.97■□□□□ 0.47
TRIM11-205ENST00000602308 PHF24Q9UPV7 400 aa17.97■□□□□ 0.47
TRIM11-205ENST00000602308 RABGAP1Q9Y3P9 1069 aa17.97■□□□□ 0.47
TRIM11-205ENST00000602308 MYH2Q9UKX2 1941 aa17.96■□□□□ 0.47
TRIM11-205ENST00000602308 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
TRIM11-205ENST00000602308 PI4K2BG5E9Z4 385 aa17.96■□□□□ 0.47
TRIM11-205ENST00000602308 RHBDL3P58872 404 aa17.96■□□□□ 0.47
TRIM11-205ENST00000602308 SKIV2LQ15477 1246 aaKnown RBP17.96■□□□□ 0.47
TRIM11-205ENST00000602308 SLC44A5Q8NCS7 719 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms