RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 FOXP4Q8IVH2 680 aaPredicted RBP17.2■□□□□ 0.34
USE1-210ENST00000601662 SDR42E1Q8WUS8 393 aa17.2■□□□□ 0.34
USE1-210ENST00000601662 R3HDMLQ9H3Y0 253 aa17.2■□□□□ 0.34
USE1-210ENST00000601662 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.2■□□□□ 0.34
USE1-210ENST00000601662 ZHX2Q9Y6X8 837 aa17.2■□□□□ 0.34
USE1-210ENST00000601662 PRKAB2O43741 272 aa17.19■□□□□ 0.34
USE1-210ENST00000601662 ALDH1A1P00352 501 aa17.19■□□□□ 0.34
USE1-210ENST00000601662 POLR3DP05423 398 aaPredicted RBP17.19■□□□□ 0.34
USE1-210ENST00000601662 SNAPC2Q13487 334 aa17.19■□□□□ 0.34
USE1-210ENST00000601662 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
USE1-210ENST00000601662 HERC5Q9UII4 1024 aaKnown RBP17.19■□□□□ 0.34
USE1-210ENST00000601662 COL2A1P02458 1487 aaPredicted RBP17.18■□□□□ 0.34
USE1-210ENST00000601662 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
USE1-210ENST00000601662 GSG1L2A8MUP6 293 aa17.18■□□□□ 0.34
USE1-210ENST00000601662 CETPP11597 493 aa17.18■□□□□ 0.34
USE1-210ENST00000601662 PTPRAP18433 802 aa17.18■□□□□ 0.34
USE1-210ENST00000601662 PTH1RQ03431 593 aa17.18■□□□□ 0.34
USE1-210ENST00000601662 RNF20Q5VTR2 975 aa17.18■□□□□ 0.34
USE1-210ENST00000601662 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
USE1-210ENST00000601662 CDK5RAP2Q96SN8 1893 aa17.18■□□□□ 0.34
USE1-210ENST00000601662 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
USE1-210ENST00000601662 TTC6Q86TZ1 520 aa17.17■□□□□ 0.34
USE1-210ENST00000601662 FAM43AQ8N2R8 423 aa17.17■□□□□ 0.34
USE1-210ENST00000601662 NAPBQ9H115 298 aa17.17■□□□□ 0.34
USE1-210ENST00000601662 MCM9Q9NXL9 1143 aa17.17■□□□□ 0.34
USE1-210ENST00000601662 RBM8AQ9Y5S9 174 aaKnown RBP17.17■□□□□ 0.34
USE1-210ENST00000601662 ZMYM6O95789 1325 aa17.17■□□□□ 0.34
USE1-210ENST00000601662 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 GDF11O95390 407 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 FGAP02671 866 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 CAP2P40123 477 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 TDO2P48775 406 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 PLCD1P51178 756 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 AMOTL1Q8IY63 956 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 C22orf23Q9BZE7 217 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 DNAJC18Q9H819 358 aa17.16■□□□□ 0.34
USE1-210ENST00000601662 DCP1AQ9NPI6 582 aaPredicted RBP17.16■□□□□ 0.34
USE1-210ENST00000601662 MYH1P12882 1939 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 BTBD19C9JJ37 291 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 GPR25O00155 361 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 CYP2D6P10635 497 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 ZKSCAN1P17029 563 aaPredicted RBP17.15■□□□□ 0.34
USE1-210ENST00000601662 HSPA4P34932 840 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 EVX2Q03828 476 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 CRHR2Q13324 411 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 NECTIN1Q15223 517 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 TAF1CQ15572 869 aaPredicted RBP17.15■□□□□ 0.34
USE1-210ENST00000601662 IMMTQ16891 758 aaKnown RBP17.15■□□□□ 0.34
USE1-210ENST00000601662 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
USE1-210ENST00000601662 SERPINB13Q9UIV8 391 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
USE1-210ENST00000601662 CXCL11O14625 94 aa17.14■□□□□ 0.33
USE1-210ENST00000601662 ZNF213O14771 459 aa17.14■□□□□ 0.33
USE1-210ENST00000601662 JAG1P78504 1218 aa17.14■□□□□ 0.33
USE1-210ENST00000601662 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
USE1-210ENST00000601662 GADL1Q6ZQY3 521 aa17.14■□□□□ 0.33
USE1-210ENST00000601662 METTL16Q86W50 562 aaKnown RBP17.14■□□□□ 0.33
USE1-210ENST00000601662 AFG3L2Q9Y4W6 797 aa17.14■□□□□ 0.33
USE1-210ENST00000601662 FOCADQ5VW36 1801 aa17.14■□□□□ 0.33
USE1-210ENST00000601662 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
USE1-210ENST00000601662 FOXP2O15409 715 aa17.13■□□□□ 0.33
USE1-210ENST00000601662 RBM25P49756 843 aaKnown RBP17.13■□□□□ 0.33
USE1-210ENST00000601662 ANAPC15P60006 121 aa17.13■□□□□ 0.33
USE1-210ENST00000601662 SPP2Q13103 211 aa17.13■□□□□ 0.33
USE1-210ENST00000601662 SBK1Q52WX2 424 aa17.13■□□□□ 0.33
USE1-210ENST00000601662 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
USE1-210ENST00000601662 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
USE1-210ENST00000601662 USP17L5A8MUK1 530 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 USP17L21D6R901 530 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 FKTNO75072 461 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 SLC3A2P08195 630 aaKnown RBP17.12■□□□□ 0.33
USE1-210ENST00000601662 ASNSP08243 561 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 DGKZQ13574 1117 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 CREB3L3Q68CJ9 461 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 KCNB2Q92953 911 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 DYNLL2Q96FJ2 89 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 TBC1D32Q96NH3 1257 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 EHD4Q9H223 541 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 TAOK2Q9UL54 1235 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 SIPA1L1O43166 1804 aa17.12■□□□□ 0.33
USE1-210ENST00000601662 PDHXO00330 501 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 SLC27A2O14975 620 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 CAPN15O75808 1086 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 GH2P01242 217 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 KRT32Q14532 448 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
USE1-210ENST00000601662 CTR9Q6PD62 1173 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 IL27Q8NEV9 243 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 CFHR5Q9BXR6 569 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 EPB41L4AQ9HCS5 686 aaPredicted RBP17.11■□□□□ 0.33
USE1-210ENST00000601662 ANAPC4Q9UJX5 808 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 ZBTB21Q9ULJ3 1066 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 DOCK1Q14185 1865 aa17.11■□□□□ 0.33
USE1-210ENST00000601662 A0A0G2JLL6 359 aaPredicted RBP17.1■□□□□ 0.33
USE1-210ENST00000601662 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
USE1-210ENST00000601662 PCP11498 1178 aaKnown RBP17.1■□□□□ 0.33
USE1-210ENST00000601662 MOGSQ13724 837 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms