RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 KCNH4Q9UQ05 1017 aa15.35■□□□□ 0.05
USE1-209ENST00000601592 LOC285556D6RIA3 1793 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 USP17L5A8MUK1 530 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 BTBD19C9JJ37 291 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 CXCL11O14625 94 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 GH2P01242 217 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 SHMT1P34896 483 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 CRHR2Q13324 411 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 STK11IPQ8N1F8 1099 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 DYNLL2Q96FJ2 89 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 AS3MTQ9HBK9 375 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
USE1-209ENST00000601592 AFG3L2Q9Y4W6 797 aa15.34■□□□□ 0.05
USE1-209ENST00000601592 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 MINDY4BA8MYZ0 360 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 MPHOSPH10O00566 681 aaKnown RBP15.33■□□□□ 0.04
USE1-209ENST00000601592 JAG1P78504 1218 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 SPP2Q13103 211 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 ABCB5Q2M3G0 1257 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 C12orf60Q5U649 245 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 CTR9Q6PD62 1173 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 ZNF280CQ8ND82 737 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 FAM227BQ96M60 508 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 R3HDMLQ9H3Y0 253 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 CABP5Q9NP86 173 aa15.33■□□□□ 0.04
USE1-209ENST00000601592 A0A0D9SFI3 127 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 A0A0G2JLL6 359 aaPredicted RBP15.32■□□□□ 0.04
USE1-209ENST00000601592 SMIM22K7EJ46 135 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 GPR25O00155 361 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 GABPAQ06546 454 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 NMIQ13287 307 aaPredicted RBP15.32■□□□□ 0.04
USE1-209ENST00000601592 TATDN1Q6P1N9 297 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
USE1-209ENST00000601592 FASTKD5Q7L8L6 764 aaKnown RBP15.32■□□□□ 0.04
USE1-209ENST00000601592 PRRT2Q7Z6L0 340 aaPredicted RBP15.32■□□□□ 0.04
USE1-209ENST00000601592 TNS4Q8IZW8 715 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 CCDC136Q96JN2 1154 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 TBC1D2Q9BYX2 928 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 NACAP1Q9BZK3 213 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 NAPBQ9H115 298 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 ZFYVE28Q9HCC9 887 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 EPB41L4AQ9HCS5 686 aaPredicted RBP15.32■□□□□ 0.04
USE1-209ENST00000601592 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 GINM1Q9NU53 330 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 SWAP70Q9UH65 585 aa15.32■□□□□ 0.04
USE1-209ENST00000601592 PATL2C9JE40 543 aaKnown RBP15.31■□□□□ 0.04
USE1-209ENST00000601592 PDHXO00330 501 aa15.31■□□□□ 0.04
USE1-209ENST00000601592 HMGCS2P54868 508 aa15.31■□□□□ 0.04
USE1-209ENST00000601592 MTMR2Q13614 643 aa15.31■□□□□ 0.04
USE1-209ENST00000601592 TTC22Q5TAA0 569 aa15.31■□□□□ 0.04
USE1-209ENST00000601592 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
USE1-209ENST00000601592 ANKRD23Q86SG2 305 aa15.31■□□□□ 0.04
USE1-209ENST00000601592 ZNF296Q8WUU4 475 aaPredicted RBP15.31■□□□□ 0.04
USE1-209ENST00000601592 FEZ1Q99689 392 aa15.31■□□□□ 0.04
USE1-209ENST00000601592 HELLSQ9NRZ9 838 aa15.31■□□□□ 0.04
USE1-209ENST00000601592 FKTNO75072 461 aa15.3■□□□□ 0.04
USE1-209ENST00000601592 SDSP20132 328 aa15.3■□□□□ 0.04
USE1-209ENST00000601592 CDK8P49336 464 aa15.3■□□□□ 0.04
USE1-209ENST00000601592 DGKZQ13574 1117 aa15.3■□□□□ 0.04
USE1-209ENST00000601592 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
USE1-209ENST00000601592 IFNL3Q8IZI9 196 aa15.3■□□□□ 0.04
USE1-209ENST00000601592 CFHR5Q9BXR6 569 aa15.3■□□□□ 0.04
USE1-209ENST00000601592 ZCCHC17Q9NP64 241 aaKnown RBP15.3■□□□□ 0.04
USE1-209ENST00000601592 GSPT1P15170 499 aaKnown RBP15.29■□□□□ 0.04
USE1-209ENST00000601592 MOGSQ13724 837 aa15.29■□□□□ 0.04
USE1-209ENST00000601592 SEPT2Q15019 361 aa15.29■□□□□ 0.04
USE1-209ENST00000601592 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
USE1-209ENST00000601592 SBK1Q52WX2 424 aa15.29■□□□□ 0.04
USE1-209ENST00000601592 CWC27Q6UX04 472 aaKnown RBP15.29■□□□□ 0.04
USE1-209ENST00000601592 C16orf86Q6ZW13 317 aa15.29■□□□□ 0.04
USE1-209ENST00000601592 PARK7Q99497 189 aaKnown RBP15.29■□□□□ 0.04
USE1-209ENST00000601592 WDR18Q9BV38 432 aa15.29■□□□□ 0.04
USE1-209ENST00000601592 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
USE1-209ENST00000601592 MYH4Q9Y623 1939 aa15.29■□□□□ 0.04
USE1-209ENST00000601592 ZSWIM8A7E2V4 1837 aa15.29■□□□□ 0.04
USE1-209ENST00000601592 CCDC171Q6TFL3 1326 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 USP17L10C9JJH3 530 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 HIP1O00291 1037 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 AKR1B1P15121 316 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 BACE1P56817 501 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 VPS53Q5VIR6 699 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 GPAT2Q6NUI2 795 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 ZNF589Q86UQ0 364 aaPredicted RBP15.28■□□□□ 0.04
USE1-209ENST00000601592 MKNK2Q9HBH9 465 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 AGTPBP1Q9UPW5 1226 aa15.28■□□□□ 0.04
USE1-209ENST00000601592 MGAMO43451 1857 aa15.27■□□□□ 0.04
USE1-209ENST00000601592 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
USE1-209ENST00000601592 CYP2C8P10632 490 aa15.27■□□□□ 0.04
USE1-209ENST00000601592 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.04
USE1-209ENST00000601592 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
USE1-209ENST00000601592 TREML2Q5T2D2 321 aa15.27■□□□□ 0.04
USE1-209ENST00000601592 TMEM179Q6ZVK1 233 aa15.27■□□□□ 0.04
USE1-209ENST00000601592 SKAP1Q86WV1 359 aa15.27■□□□□ 0.04
USE1-209ENST00000601592 TICAM2Q86XR7 235 aa15.27■□□□□ 0.04
USE1-209ENST00000601592 PROCA1Q8NCQ7 364 aaPredicted RBP15.27■□□□□ 0.04
USE1-209ENST00000601592 SMCR8Q8TEV9 937 aaPredicted RBP15.27■□□□□ 0.04
USE1-209ENST00000601592 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.04
USE1-209ENST00000601592 LAMA4Q16363 1823 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms