RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-218ENST00000601538 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 SPDYE3A6NKU9 549 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 CTNNA1P35221 906 aaKnown RBP13.51□□□□□ -0.25
SHANK2-218ENST00000601538 LMBRD1Q9NUN5 540 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 SERPINB6P35237 376 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 ATP6V1E1P36543 226 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 TRIM60Q495X7 471 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 SOS1Q07889 1333 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-218ENST00000601538 CXorf56Q9H5V9 222 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 SAR1BQ9Y6B6 198 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 ARHGEF9O43307 516 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 BSDC1Q9NW68 430 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-218ENST00000601538 E9PMD0 336 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 CALUO43852 315 aaPredicted RBP13.5□□□□□ -0.25
SHANK2-218ENST00000601538 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 SETD1BQ9UPS6 1966 aaKnown RBP13.5□□□□□ -0.25
SHANK2-218ENST00000601538 MCM10Q7L590 875 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 MRPL46Q9H2W6 279 aaKnown RBP13.5□□□□□ -0.25
SHANK2-218ENST00000601538 CLSTN2Q9H4D0 955 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 ANKRD12Q6UB98 2062 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 UQCRFS1P1P0C7P4 283 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 SLC12A2P55011 1212 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 TSC1Q92574 1164 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 OLFM3Q96PB7 478 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 FNBP4Q8N3X1 1017 aaPredicted RBP13.5□□□□□ -0.25
SHANK2-218ENST00000601538 CDC5LQ99459 802 aaKnown RBP13.5□□□□□ -0.25
SHANK2-218ENST00000601538 KIFC3Q9BVG8 833 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 NOC4LQ9BVI4 516 aaKnown RBP13.5□□□□□ -0.25
SHANK2-218ENST00000601538 RASA3Q14644 834 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 HAUS1Q96CS2 278 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 JPH2Q9BR39 696 aaPredicted RBP13.5□□□□□ -0.25
SHANK2-218ENST00000601538 ANKFY1Q9P2R3 1169 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 ZNF215Q9UL58 517 aaPredicted RBP13.5□□□□□ -0.25
SHANK2-218ENST00000601538 ATP5HO75947 161 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 ASIC2Q16515 512 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 CCDC169A6NNP5 214 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 TBC1D8O95759 1140 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 TSPY3P0CV98 308 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 TSPY8P0CW00 308 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 MCMDC2Q4G0Z9 681 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
SHANK2-218ENST00000601538 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-218ENST00000601538 KIF11P52732 1056 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 DHX58Q96C10 678 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 SPZ1Q9BXG8 430 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 NOP53Q9NZM5 478 aaKnown RBP13.49□□□□□ -0.25
SHANK2-218ENST00000601538 BCRP11274 1271 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 PDLIM2Q96JY6 352 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 SUFUQ9UMX1 484 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 LRGUKQ96M69 825 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 HSP90AA4PQ58FG1 418 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 TRIM42Q8IWZ5 723 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 MLKLQ8NB16 471 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 ANGPTL2Q9UKU9 493 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 ZPR1O75312 459 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 PNMA6AP0CW24 399 aaPredicted RBP13.49□□□□□ -0.25
SHANK2-218ENST00000601538 SMTNP53814 917 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 NOP14P78316 857 aaKnown RBP13.49□□□□□ -0.25
SHANK2-218ENST00000601538 RPS6KA1Q15418 735 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 CTAGE3PQ8IX95 158 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 PRAM1Q96QH2 718 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 GCFC2P16383 781 aaKnown RBP13.49□□□□□ -0.25
SHANK2-218ENST00000601538 KCNA4P22459 653 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 ESYT1Q9BSJ8 1104 aa13.49□□□□□ -0.25
SHANK2-218ENST00000601538 ZSCAN20P17040 1043 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-218ENST00000601538 GIMAP4Q9NUV9 329 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 SCHIP1Q9P0W5 487 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-218ENST00000601538 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-218ENST00000601538 ARHGAP31Q2M1Z3 1444 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 MSH6P52701 1360 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 TBC1D8BQ0IIM8 1120 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 NMIQ13287 307 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-218ENST00000601538 BCAS4Q8TDM0 211 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 KDM5CP41229 1560 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 POLR3AO14802 1390 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-218ENST00000601538 TRIM37O94972 964 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 NUTM2GQ5VZR2 741 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 ST13P4Q8IZP2 240 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-218ENST00000601538 TEX9Q8N6V9 391 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 COL17A1Q9UMD9 1497 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-218ENST00000601538 VPS41P49754 854 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 SESN3P58005 492 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 LMNB1P20700 586 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 CCT6AP40227 531 aaKnown RBP13.48□□□□□ -0.25
SHANK2-218ENST00000601538 RAPGEF1Q13905 1077 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 TMCO4Q5TGY1 634 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 CCDC105Q8IYK2 499 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 KRT12Q99456 494 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 ANGPTL3Q9Y5C1 460 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 UGGT2Q9NYU1 1516 aa13.48□□□□□ -0.25
SHANK2-218ENST00000601538 GNGT1P63211 74 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms