RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 HOXD10P28358 340 aa27.47■■□□□ 1.99
SSBP4-209ENST00000601357 SMCR8Q8TEV9 937 aaPredicted RBP27.47■■□□□ 1.99
SSBP4-209ENST00000601357 HAUS7Q99871 368 aa27.47■■□□□ 1.99
SSBP4-209ENST00000601357 BOLA2Q9H3K6 86 aa27.47■■□□□ 1.99
SSBP4-209ENST00000601357 PNMA3Q9UL41 463 aa27.47■■□□□ 1.99
SSBP4-209ENST00000601357 GDF11O95390 407 aa27.46■■□□□ 1.99
SSBP4-209ENST00000601357 FCGRTP55899 365 aa27.46■■□□□ 1.99
SSBP4-209ENST00000601357 BACE1P56817 501 aa27.46■■□□□ 1.99
SSBP4-209ENST00000601357 SH3TC2Q8TF17 1288 aa27.46■■□□□ 1.99
SSBP4-209ENST00000601357 SERPINB13Q9UIV8 391 aa27.46■■□□□ 1.99
SSBP4-209ENST00000601357 SMARCA5O60264 1052 aaPredicted RBP27.45■■□□□ 1.98
SSBP4-209ENST00000601357 MTMR2Q13614 643 aa27.45■■□□□ 1.98
SSBP4-209ENST00000601357 TTC6Q86TZ1 520 aa27.45■■□□□ 1.98
SSBP4-209ENST00000601357 DCTPP1Q9H773 170 aa27.45■■□□□ 1.98
SSBP4-209ENST00000601357 MYH7P12883 1935 aa27.45■■□□□ 1.98
SSBP4-209ENST00000601357 MYPNQ86TC9 1320 aa27.44■■□□□ 1.98
SSBP4-209ENST00000601357 CRNKL1Q9BZJ0 848 aaKnown RBP27.44■■□□□ 1.98
SSBP4-209ENST00000601357 PDE4DIPQ5VU43 2346 aa27.43■■□□□ 1.98
SSBP4-209ENST00000601357 ADD2P35612 726 aa27.43■■□□□ 1.98
SSBP4-209ENST00000601357 PLCD1P51178 756 aa27.43■■□□□ 1.98
SSBP4-209ENST00000601357 PABPC4Q13310 644 aaKnown RBP eCLIP27.43■■□□□ 1.98
SSBP4-209ENST00000601357 LCORLQ8N3X6 602 aa27.43■■□□□ 1.98
SSBP4-209ENST00000601357 KIAA0100Q14667 2235 aaKnown RBP27.43■■□□□ 1.98
SSBP4-209ENST00000601357 C19orf81C9J6K1 198 aa27.42■■□□□ 1.98
SSBP4-209ENST00000601357 PRKCZQ05513 592 aa27.42■■□□□ 1.98
SSBP4-209ENST00000601357 FAM110CQ1W6H9 321 aa27.42■■□□□ 1.98
SSBP4-209ENST00000601357 ANKRD13CQ8N6S4 541 aa27.42■■□□□ 1.98
SSBP4-209ENST00000601357 TMEM106CQ9BVX2 250 aa27.42■■□□□ 1.98
SSBP4-209ENST00000601357 ASCC2Q9H1I8 757 aaPredicted RBP27.42■■□□□ 1.98
SSBP4-209ENST00000601357 USP17L10C9JJH3 530 aa27.41■■□□□ 1.98
SSBP4-209ENST00000601357 GH2P01242 217 aa27.41■■□□□ 1.98
SSBP4-209ENST00000601357 EN2P19622 333 aaPredicted RBP27.41■■□□□ 1.98
SSBP4-209ENST00000601357 HOXA7P31268 230 aaPredicted RBP27.41■■□□□ 1.98
SSBP4-209ENST00000601357 GCLCP48506 637 aaPredicted RBP27.41■■□□□ 1.98
SSBP4-209ENST00000601357 GABPAQ06546 454 aa27.41■■□□□ 1.98
SSBP4-209ENST00000601357 SLFNL1Q499Z3 407 aa27.41■■□□□ 1.98
SSBP4-209ENST00000601357 RAET1EQ8TD07 263 aa27.41■■□□□ 1.98
SSBP4-209ENST00000601357 GRK4P32298 578 aa27.4■■□□□ 1.98
SSBP4-209ENST00000601357 SHMT1P34896 483 aa27.4■■□□□ 1.98
SSBP4-209ENST00000601357 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.4■■□□□ 1.986e-8■■■■□ 24.3
SSBP4-209ENST00000601357 DCP1AQ9NPI6 582 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-209ENST00000601357 TMOD4Q9NZQ9 345 aa27.4■■□□□ 1.98
SSBP4-209ENST00000601357 GABRQQ9UN88 632 aa27.4■■□□□ 1.98
SSBP4-209ENST00000601357 RRP1P56182 461 aaKnown RBP27.39■■□□□ 1.98
SSBP4-209ENST00000601357 SDR42E1Q8WUS8 393 aa27.39■■□□□ 1.98
SSBP4-209ENST00000601357 ARMT1Q9H993 441 aa27.39■■□□□ 1.98
SSBP4-209ENST00000601357 ECHDC1Q9NTX5 307 aa27.39■■□□□ 1.98
SSBP4-209ENST00000601357 MCM9Q9NXL9 1143 aa27.39■■□□□ 1.98
SSBP4-209ENST00000601357 EVX2Q03828 476 aa27.38■■□□□ 1.97
SSBP4-209ENST00000601357 UBE3CQ15386 1083 aa27.38■■□□□ 1.97
SSBP4-209ENST00000601357 CERKLQ49MI3 558 aaPredicted RBP27.38■■□□□ 1.97
SSBP4-209ENST00000601357 EMILIN3Q9NT22 766 aa27.38■■□□□ 1.97
SSBP4-209ENST00000601357 PCDHB15Q9Y5E8 787 aa27.38■■□□□ 1.97
SSBP4-209ENST00000601357 TNPO2O14787 897 aaKnown RBP27.37■■□□□ 1.97
SSBP4-209ENST00000601357 CHGBP05060 677 aa27.37■■□□□ 1.97
SSBP4-209ENST00000601357 POLR3DP05423 398 aaPredicted RBP27.37■■□□□ 1.97
SSBP4-209ENST00000601357 MORF4L1Q9UBU8 362 aa27.37■■□□□ 1.97
SSBP4-209ENST00000601357 MBD4O95243 580 aa27.36■■□□□ 1.97
SSBP4-209ENST00000601357 MYCP01106 439 aaPredicted RBP27.36■■□□□ 1.97
SSBP4-209ENST00000601357 FLT3LGP49771 235 aa27.36■■□□□ 1.97
SSBP4-209ENST00000601357 ABCB5Q2M3G0 1257 aa27.36■■□□□ 1.97
SSBP4-209ENST00000601357 IRF5Q13568 498 aa27.35■■□□□ 1.97
SSBP4-209ENST00000601357 MTFR1Q15390 333 aa27.35■■□□□ 1.97
SSBP4-209ENST00000601357 SLAIN1Q8ND83 568 aa27.35■■□□□ 1.97
SSBP4-209ENST00000601357 C12orf42Q96LP6 360 aa27.35■■□□□ 1.97
SSBP4-209ENST00000601357 ATP8A2Q9NTI2 1148 aa27.35■■□□□ 1.97
SSBP4-209ENST00000601357 TAOK2Q9UL54 1235 aa27.35■■□□□ 1.97
SSBP4-209ENST00000601357 BAZ2AQ9UIF9 1905 aaKnown RBP27.35■■□□□ 1.97
SSBP4-209ENST00000601357 DOCK3Q8IZD9 2030 aa27.34■■□□□ 1.97
SSBP4-209ENST00000601357 PRKAB2O43741 272 aa27.34■■□□□ 1.97
SSBP4-209ENST00000601357 GUCY1A2P33402 732 aa27.34■■□□□ 1.97
SSBP4-209ENST00000601357 IRX3P78415 501 aaPredicted RBP27.34■■□□□ 1.97
SSBP4-209ENST00000601357 PRPF38BQ5VTL8 546 aaKnown RBP27.34■■□□□ 1.97
SSBP4-209ENST00000601357 USP17L2Q6R6M4 530 aa27.34■■□□□ 1.97
SSBP4-209ENST00000601357 P2RX7Q99572 595 aaKnown RBP27.34■■□□□ 1.97
SSBP4-209ENST00000601357 CYP2D6P10635 497 aa27.33■■□□□ 1.97
SSBP4-209ENST00000601357 HERVK_113P62684 666 aa27.33■■□□□ 1.97
SSBP4-209ENST00000601357 RAB3GAP1Q15042 981 aa27.33■■□□□ 1.97
SSBP4-209ENST00000601357 ZSCAN25Q6NSZ9 544 aa27.33■■□□□ 1.97
SSBP4-209ENST00000601357 PXYLP1Q8TE99 480 aa27.33■■□□□ 1.97
SSBP4-209ENST00000601357 KIAA1683Q9H0B3 1180 aa27.33■■□□□ 1.97
SSBP4-209ENST00000601357 ADCY3O60266 1144 aa27.32■■□□□ 1.96
SSBP4-209ENST00000601357 COA7Q96BR5 231 aa27.32■■□□□ 1.96
SSBP4-209ENST00000601357 CABP5Q9NP86 173 aa27.32■■□□□ 1.96
SSBP4-209ENST00000601357 PLXNB2O15031 1838 aa27.32■■□□□ 1.96
SSBP4-209ENST00000601357 MYH8P13535 1937 aa27.31■■□□□ 1.96
SSBP4-209ENST00000601357 POTEEQ6S8J3 1075 aa27.31■■□□□ 1.96
SSBP4-209ENST00000601357 ACER1Q8TDN7 264 aa27.31■■□□□ 1.96
SSBP4-209ENST00000601357 GPATCH3Q96I76 525 aa27.31■■□□□ 1.96
SSBP4-209ENST00000601357 PUS7LQ9H0K6 701 aaKnown RBP27.31■■□□□ 1.96
SSBP4-209ENST00000601357 TXNRD2Q9NNW7 524 aa27.31■■□□□ 1.96
SSBP4-209ENST00000601357 CCL5P13501 91 aa27.3■■□□□ 1.96
SSBP4-209ENST00000601357 USP14P54578 494 aa27.3■■□□□ 1.96
SSBP4-209ENST00000601357 TSHZ3Q63HK5 1081 aa27.3■■□□□ 1.96
SSBP4-209ENST00000601357 KBTBD3Q8NAB2 608 aa27.3■■□□□ 1.96
SSBP4-209ENST00000601357 FEZ1Q99689 392 aa27.3■■□□□ 1.96
SSBP4-209ENST00000601357 RBPJLQ9UBG7 517 aa27.3■■□□□ 1.96
SSBP4-209ENST00000601357 SWAP70Q9UH65 585 aa27.3■■□□□ 1.96
SSBP4-209ENST00000601357 ELNP15502 786 aa27.29■■□□□ 1.96
SSBP4-209ENST00000601357 UBXN2AP68543 259 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms