RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
ZNF548-211ENST00000600927 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 CSADQ9Y600 493 aa13.65□□□□□ -0.22
ZNF548-211ENST00000600927 DOCK1Q14185 1865 aa13.64□□□□□ -0.23
ZNF548-211ENST00000600927 IGF2BP3O00425 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
ZNF548-211ENST00000600927 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
ZNF548-211ENST00000600927 INHBEP58166 350 aa13.64□□□□□ -0.23
ZNF548-211ENST00000600927 DYNLL1P63167 89 aaKnown RBP13.64□□□□□ -0.23
ZNF548-211ENST00000600927 NOM1Q5C9Z4 860 aaKnown RBP13.64□□□□□ -0.23
ZNF548-211ENST00000600927 ERO1BQ86YB8 467 aa13.64□□□□□ -0.23
ZNF548-211ENST00000600927 CHMP4CQ96CF2 233 aa13.64□□□□□ -0.23
ZNF548-211ENST00000600927 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
ZNF548-211ENST00000600927 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-211ENST00000600927 ZNF532Q9HCE3 1301 aa13.64□□□□□ -0.23
ZNF548-211ENST00000600927 PATL2C9JE40 543 aaKnown RBP13.63□□□□□ -0.23
ZNF548-211ENST00000600927 M0R2C6 588 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 GPAA1O43292 621 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 TRPA1O75762 1119 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 SLURP2P0DP57 97 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 CASTP20810 708 aaKnown RBP13.63□□□□□ -0.23
ZNF548-211ENST00000600927 PPIL2Q13356 520 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 IMMTQ16891 758 aaKnown RBP13.63□□□□□ -0.23
ZNF548-211ENST00000600927 BLOC1S2Q6QNY1 142 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
ZNF548-211ENST00000600927 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 JAKMIP1Q96N16 626 aaKnown RBP13.63□□□□□ -0.23
ZNF548-211ENST00000600927 NEK1Q96PY6 1258 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 STRBPQ96SI9 672 aaKnown RBP13.63□□□□□ -0.23
ZNF548-211ENST00000600927 PTPN18Q99952 460 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
ZNF548-211ENST00000600927 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
ZNF548-211ENST00000600927 ALDH1A1P00352 501 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 CYP21A2P08686 494 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 RPS6KB1P23443 525 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 PPATQ06203 517 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 MIGA1Q8NAN2 632 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 BRI3BPQ8WY22 251 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 OTUD5Q96G74 571 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
ZNF548-211ENST00000600927 DNAJC18Q9H819 358 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 PDRG1Q9NUG6 133 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 KCNH4Q9UQ05 1017 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 MYH7P12883 1935 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 PHIPQ8WWQ0 1821 aa13.62□□□□□ -0.23
ZNF548-211ENST00000600927 IRF6O14896 467 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 FGAP02671 866 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 NT5C2P49902 561 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 GTF2A2P52657 109 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 NUCB2P80303 420 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 ADCK5Q3MIX3 580 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 MAPKAPK5Q8IW41 473 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 ZSCAN29Q8IWY8 852 aaPredicted RBP13.61□□□□□ -0.23
ZNF548-211ENST00000600927 SCYL3Q8IZE3 742 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 TGFBRAP1Q8WUH2 860 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 UPF3BQ9BZI7 483 aaKnown RBP13.61□□□□□ -0.23
ZNF548-211ENST00000600927 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
ZNF548-211ENST00000600927 NAV1Q8NEY1 1877 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
ZNF548-211ENST00000600927 MOGSQ13724 837 aa13.6□□□□□ -0.23
ZNF548-211ENST00000600927 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
ZNF548-211ENST00000600927 AGXT2Q9BYV1 514 aa13.6□□□□□ -0.23
ZNF548-211ENST00000600927 NACAP1Q9BZK3 213 aa13.6□□□□□ -0.23
ZNF548-211ENST00000600927 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
ZNF548-211ENST00000600927 CCL15-CCL14A0A0B4J2E2 113 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 MAGEB6P1A0A0J9YX57 407 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 ZNF213O14771 459 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 FOXP2O15409 715 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 CTNND1O60716 968 aaKnown RBP13.59□□□□□ -0.23
ZNF548-211ENST00000600927 TBC1D8O95759 1140 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 CHGBP05060 677 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 PTPRAP18433 802 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 AK2P54819 239 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 EXOSC10Q01780 885 aaKnown RBP13.59□□□□□ -0.23
ZNF548-211ENST00000600927 RRP1BQ14684 758 aaKnown RBP13.59□□□□□ -0.23
ZNF548-211ENST00000600927 CCL15Q16663 113 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 MTA3Q9BTC8 594 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 EHD4Q9H223 541 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-211ENST00000600927 R3HDMLQ9H3Y0 253 aa13.59□□□□□ -0.23
ZNF548-211ENST00000600927 ZCCHC17Q9NP64 241 aaKnown RBP13.59□□□□□ -0.23
ZNF548-211ENST00000600927 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.59□□□□□ -0.23
ZNF548-211ENST00000600927 ATAD5Q96QE3 1844 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 E7EWF7 191 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 CETPP11597 493 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 SNAPC2Q13487 334 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 SLFNL1Q499Z3 407 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 CLEC17AQ6ZS10 378 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 FAM43AQ8N2R8 423 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 LCORLQ8N3X6 602 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
ZNF548-211ENST00000600927 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
ZNF548-211ENST00000600927 PTPRFP10586 1907 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 MYH1P12882 1939 aa13.58□□□□□ -0.24
ZNF548-211ENST00000600927 HTTP42858 3142 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms