RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 PAK6Q9NQU5 681 aaPredicted RBP12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 GNL3LQ9NVN8 582 aaKnown RBP12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 CHD7Q9P2D1 2997 aa12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 GPR75-ASB3A0A0A6YYF3 556 aa12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 PNMA6EA0A0J9YXQ4 647 aa12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 CCER2I3L3R5 266 aa12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 FMNL1O95466 1100 aaPredicted RBP12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ELNP15502 786 aa12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 GADL1Q6ZQY3 521 aa12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ANKLE1Q8NAG6 615 aa12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 PARK7Q99497 189 aaKnown RBP12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 API5Q9BZZ5 524 aaKnown RBP12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 PTPRZ1P23471 2315 aaPredicted RBP12.51□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 TRIM75PA6NK02 468 aa12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SRGAP3O43295 1099 aa12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 MCAMP43121 646 aa12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 JAG1P78504 1218 aa12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SMAD3P84022 425 aaKnown RBP12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 DZIP1Q86YF9 867 aaKnown RBP12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ZSCAN29Q8IWY8 852 aaPredicted RBP12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 PPM1EQ8WY54 764 aa12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 NSUN4Q96CB9 384 aaKnown RBP12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 NBPF3Q9H094 633 aa12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 FRMPD3Q5JV73 1810 aa12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 MYH1P12882 1939 aa12.5□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 PEX10O60683 326 aa12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 KRT37O76014 449 aa12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 INHAP05111 366 aa12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 CT47B1P0C2W7 299 aaPredicted RBP12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 TRIM27P14373 513 aa12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ARID4AP29374 1257 aaPredicted RBP12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 FLT3LGP49771 235 aa12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 FCGRTP55899 365 aa12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 C11orf49Q9H6J7 331 aa12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 DNAJC18Q9H819 358 aa12.49□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SMIM22K7EJ46 135 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ST18O60284 1047 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 CTNND1O60716 968 aaKnown RBP12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 BCAR3O75815 825 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ADGRA1Q86SQ6 560 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 MIER1Q8N108 512 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ZGPATQ8N5A5 531 aaKnown RBP12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 PICK1Q9NRD5 415 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 AGTPBP1Q9UPW5 1226 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SLC45A1Q9Y2W3 748 aa12.48□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ADCY3O60266 1144 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 TBC1D12O60347 775 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 BMP1P13497 986 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 TRIM32Q13049 653 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 MVPQ14764 893 aaKnown RBP12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ERICH6Q7L0X2 663 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 FASTKD5Q7L8L6 764 aaKnown RBP12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SPATA5Q8NB90 893 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 NEUROD6Q96NK8 337 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 OSBPL5Q9H0X9 879 aaPredicted RBP12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SETXQ7Z333 2677 aaKnown RBP12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 UNC79Q9P2D8 2635 aa12.47□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SPP2Q13103 211 aa12.46□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SH3RF3Q8TEJ3 882 aaPredicted RBP12.46□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 ARHGAP45Q92619 1136 aa12.46□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 CLUAP1Q96AJ1 413 aa12.46□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 SNRKQ9NRH2 765 aa12.46□□□□□ -0.41
MIA-RAB4B-201ENST00000600729 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 TRANK1O15050 2925 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 PFASO15067 1338 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 TNPO2O14787 897 aaKnown RBP12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 GNAI3P08754 354 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 CAP2P40123 477 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 HMGCS2P54868 508 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 IRF5Q13568 498 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 SHHQ15465 462 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 LBHD1Q9BQE6 289 aaPredicted RBP12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 DBNDD2Q9BQY9 259 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 AKAP2Q9Y2D5 859 aa12.45□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 TRIOO75962 3097 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 RIF1Q5UIP0 2472 aaKnown RBP12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 POLA2Q14181 598 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 FAM110CQ1W6H9 321 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 TMEM57Q8N5G2 664 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 PXYLP1Q8TE99 480 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 SMCR8Q8TEV9 937 aaPredicted RBP12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 C1orf115Q9H7X2 142 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 AATFQ9NY61 560 aaKnown RBP eCLIP12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 TLR7Q9NYK1 1049 aaKnown RBP12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 RAI14Q9P0K7 980 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 GJD2Q9UKL4 321 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 NAV1Q8NEY1 1877 aa12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 FASNP49327 2511 aaKnown RBP12.44□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 ACACBO00763 2458 aa12.43□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
MIA-RAB4B-201ENST00000600729 TNNI3KQ59H18 835 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms