RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
LSM4-206ENST00000600289 PICK1Q9NRD5 415 aa19.49■□□□□ 0.71
LSM4-206ENST00000600289 GINM1Q9NU53 330 aa19.49■□□□□ 0.71
LSM4-206ENST00000600289 RBM27Q9P2N5 1060 aaKnown RBP19.49■□□□□ 0.71
LSM4-206ENST00000600289 SAP30BPQ9UHR5 308 aaKnown RBP19.49■□□□□ 0.71
LSM4-206ENST00000600289 CCL15-CCL14A0A0B4J2E2 113 aa19.48■□□□□ 0.71
LSM4-206ENST00000600289 FAM196BA6NMK8 535 aa19.48■□□□□ 0.71
LSM4-206ENST00000600289 CXCL11O14625 94 aa19.48■□□□□ 0.71
LSM4-206ENST00000600289 CHGBP05060 677 aa19.48■□□□□ 0.71
LSM4-206ENST00000600289 CAP2P40123 477 aa19.48■□□□□ 0.71
LSM4-206ENST00000600289 CAP1Q01518 475 aa19.48■□□□□ 0.71
LSM4-206ENST00000600289 CCL15Q16663 113 aa19.48■□□□□ 0.71
LSM4-206ENST00000600289 SLFNL1Q499Z3 407 aa19.48■□□□□ 0.71
LSM4-206ENST00000600289 PUS7LQ9H0K6 701 aaKnown RBP19.48■□□□□ 0.71
LSM4-206ENST00000600289 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
LSM4-206ENST00000600289 TATDN1Q6P1N9 297 aa19.47■□□□□ 0.71
LSM4-206ENST00000600289 CRACR2BQ8N4Y2 399 aaPredicted RBP19.47■□□□□ 0.71
LSM4-206ENST00000600289 SDR42E1Q8WUS8 393 aa19.47■□□□□ 0.71
LSM4-206ENST00000600289 SERPINB13Q9UIV8 391 aa19.47■□□□□ 0.71
LSM4-206ENST00000600289 AFG3L2Q9Y4W6 797 aa19.47■□□□□ 0.71
LSM4-206ENST00000600289 RRP1BQ14684 758 aaKnown RBP19.46■□□□□ 0.71
LSM4-206ENST00000600289 CD99L2Q8TCZ2 262 aa19.46■□□□□ 0.71
LSM4-206ENST00000600289 EVI5LQ96CN4 794 aa19.46■□□□□ 0.71
LSM4-206ENST00000600289 ZNF333Q96JL9 665 aa19.46■□□□□ 0.71
LSM4-206ENST00000600289 TRIM34Q9BYJ4 488 aa19.46■□□□□ 0.71
LSM4-206ENST00000600289 GABPAQ06546 454 aa19.45■□□□□ 0.7
LSM4-206ENST00000600289 MOGSQ13724 837 aa19.45■□□□□ 0.7
LSM4-206ENST00000600289 PLEKHM2Q8IWE5 1019 aa19.45■□□□□ 0.7
LSM4-206ENST00000600289 OSBP2Q969R2 916 aa19.45■□□□□ 0.7
LSM4-206ENST00000600289 STRBPQ96SI9 672 aaKnown RBP19.45■□□□□ 0.7
LSM4-206ENST00000600289 FSD1Q9BTV5 496 aa19.45■□□□□ 0.7
LSM4-206ENST00000600289 MCM9Q9NXL9 1143 aa19.45■□□□□ 0.7
LSM4-206ENST00000600289 ZSWIM8A7E2V4 1837 aa19.44■□□□□ 0.7
LSM4-206ENST00000600289 A0A0G2JLL6 359 aaPredicted RBP19.44■□□□□ 0.7
LSM4-206ENST00000600289 ASNSP08243 561 aa19.44■□□□□ 0.7
LSM4-206ENST00000600289 MNX1P50219 401 aaPredicted RBP19.44■□□□□ 0.7
LSM4-206ENST00000600289 PLCD1P51178 756 aa19.44■□□□□ 0.7
LSM4-206ENST00000600289 GIMAP6Q6P9H5 292 aa19.44■□□□□ 0.7
LSM4-206ENST00000600289 PRRT2Q7Z6L0 340 aaPredicted RBP19.44■□□□□ 0.7
LSM4-206ENST00000600289 ANKRD23Q86SG2 305 aa19.44■□□□□ 0.7
LSM4-206ENST00000600289 ERO1AQ96HE7 468 aa19.44■□□□□ 0.7
LSM4-206ENST00000600289 PRO3102Q9H379 93 aa19.44■□□□□ 0.7
LSM4-206ENST00000600289 ZHX2Q9Y6X8 837 aa19.44■□□□□ 0.7
LSM4-206ENST00000600289 GREB1LQ9C091 1923 aaPredicted RBP19.44■□□□□ 0.7
LSM4-206ENST00000600289 PRKAB2O43741 272 aa19.43■□□□□ 0.7
LSM4-206ENST00000600289 POLR3DP05423 398 aaPredicted RBP19.43■□□□□ 0.7
LSM4-206ENST00000600289 GNAT2P19087 354 aa19.43■□□□□ 0.7
LSM4-206ENST00000600289 ZMYM1Q5SVZ6 1142 aa19.43■□□□□ 0.7
LSM4-206ENST00000600289 FAM43AQ8N2R8 423 aa19.43■□□□□ 0.7
LSM4-206ENST00000600289 TMEM106CQ9BVX2 250 aa19.43■□□□□ 0.7
LSM4-206ENST00000600289 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
LSM4-206ENST00000600289 USP17L5A8MUK1 530 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 BTBD19C9JJ37 291 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 GPAA1O43292 621 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 SHMT1P34896 483 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 CRHR2Q13324 411 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 DDRGK1Q96HY6 314 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 WDR18Q9BV38 432 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 AS3MTQ9HBK9 375 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
LSM4-206ENST00000600289 M0R2C6 588 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 SLC4A8Q2Y0W8 1093 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 C12orf60Q5U649 245 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 FASTKD5Q7L8L6 764 aaKnown RBP19.41■□□□□ 0.7
LSM4-206ENST00000600289 AMOTL1Q8IY63 956 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 ZNF280CQ8ND82 737 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 EFCC1Q9HA90 598 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
LSM4-206ENST00000600289 SWAP70Q9UH65 585 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 SLC45A1Q9Y2W3 748 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 ROBO3Q96MS0 1386 aa19.41■□□□□ 0.7
LSM4-206ENST00000600289 MGAMO43451 1857 aa19.4■□□□□ 0.7
LSM4-206ENST00000600289 GSG1L2A8MUP6 293 aa19.4■□□□□ 0.7
LSM4-206ENST00000600289 JAG1P78504 1218 aa19.4■□□□□ 0.7
LSM4-206ENST00000600289 TAF1CQ15572 869 aaPredicted RBP19.4■□□□□ 0.7
LSM4-206ENST00000600289 SBK1Q52WX2 424 aa19.4■□□□□ 0.7
LSM4-206ENST00000600289 SH3D19Q5HYK7 790 aa19.4■□□□□ 0.7
LSM4-206ENST00000600289 ZFYVE28Q9HCC9 887 aa19.4■□□□□ 0.7
LSM4-206ENST00000600289 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.4■□□□□ 0.7
LSM4-206ENST00000600289 GDF11O95390 407 aa19.39■□□□□ 0.69
LSM4-206ENST00000600289 GPAT2Q6NUI2 795 aa19.39■□□□□ 0.69
LSM4-206ENST00000600289 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
LSM4-206ENST00000600289 TRIM75PA6NK02 468 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 USP17L12C9JPN9 530 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 USP17L21D6R901 530 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 CYP2D6P10635 497 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 EVX2Q03828 476 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 LAMA4Q16363 1823 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 CERKLQ49MI3 558 aaPredicted RBP19.38■□□□□ 0.69
LSM4-206ENST00000600289 CTR9Q6PD62 1173 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 CCDC84Q86UT8 332 aaPredicted RBP19.38■□□□□ 0.69
LSM4-206ENST00000600289 ADGRA2Q96PE1 1338 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 SEC62Q99442 399 aaKnown RBP19.38■□□□□ 0.69
LSM4-206ENST00000600289 HELLSQ9NRZ9 838 aa19.38■□□□□ 0.69
LSM4-206ENST00000600289 PATL2C9JE40 543 aaKnown RBP19.37■□□□□ 0.69
LSM4-206ENST00000600289 PDHXO00330 501 aa19.37■□□□□ 0.69
LSM4-206ENST00000600289 TLR2O60603 784 aa19.37■□□□□ 0.69
LSM4-206ENST00000600289 GH2P01242 217 aa19.37■□□□□ 0.69
LSM4-206ENST00000600289 PDE4AP27815 886 aa19.37■□□□□ 0.69
LSM4-206ENST00000600289 SPP2Q13103 211 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms