RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CERKLQ49MI3 558 aaPredicted RBP33.83■■■■□ 3.01
SSBP4-206ENST00000599699 TATDN1Q6P1N9 297 aa33.83■■■■□ 3.01
SSBP4-206ENST00000599699 GINM1Q9NU53 330 aa33.83■■■■□ 3.01
SSBP4-206ENST00000599699 ZBTB21Q9ULJ3 1066 aa33.83■■■■□ 3.01
SSBP4-206ENST00000599699 USP17L12C9JPN9 530 aa33.82■■■■□ 3
SSBP4-206ENST00000599699 USP17L21D6R901 530 aa33.82■■■■□ 3
SSBP4-206ENST00000599699 PDHXO00330 501 aa33.82■■■■□ 3
SSBP4-206ENST00000599699 JAG1P78504 1218 aa33.82■■■■□ 3
SSBP4-206ENST00000599699 EVX2Q03828 476 aa33.82■■■■□ 3
SSBP4-206ENST00000599699 MOGSQ13724 837 aa33.82■■■■□ 3
SSBP4-206ENST00000599699 DDX60LQ5H9U9 1706 aaKnown RBP33.82■■■■□ 3
SSBP4-206ENST00000599699 GH2P01242 217 aa33.81■■■■□ 3
SSBP4-206ENST00000599699 DGKZQ13574 1117 aa33.81■■■■□ 3
SSBP4-206ENST00000599699 ZMYM1Q5SVZ6 1142 aa33.81■■■■□ 3
SSBP4-206ENST00000599699 RILPL2Q969X0 211 aa33.81■■■■□ 3
SSBP4-206ENST00000599699 SEC62Q99442 399 aaKnown RBP33.81■■■■□ 3
SSBP4-206ENST00000599699 CYP2D7A0A087X1C5 515 aa33.8■■■■□ 3
SSBP4-206ENST00000599699 APPP05067 770 aa33.8■■■■□ 3
SSBP4-206ENST00000599699 GNAT2P19087 354 aa33.8■■■■□ 3
SSBP4-206ENST00000599699 SHMT1P34896 483 aa33.8■■■■□ 3
SSBP4-206ENST00000599699 GABPAQ06546 454 aa33.8■■■■□ 3
SSBP4-206ENST00000599699 ABCB5Q2M3G0 1257 aa33.79■■■■□ 3
SSBP4-206ENST00000599699 DYNLL2Q96FJ2 89 aa33.79■■■■□ 3
SSBP4-206ENST00000599699 OSBPL3Q9H4L5 887 aa33.79■■■■□ 3
SSBP4-206ENST00000599699 CABP5Q9NP86 173 aa33.79■■■■□ 3
SSBP4-206ENST00000599699 ATAD5Q96QE3 1844 aa33.79■■■■□ 3
SSBP4-206ENST00000599699 GSG1L2A8MUP6 293 aa33.78■■■■□ 3
SSBP4-206ENST00000599699 C12orf60Q5U649 245 aa33.78■■■■□ 3
SSBP4-206ENST00000599699 GPAT2Q6NUI2 795 aa33.78■■■■□ 3
SSBP4-206ENST00000599699 CTR9Q6PD62 1173 aa33.78■■■■□ 3
SSBP4-206ENST00000599699 WDR18Q9BV38 432 aa33.78■■■■□ 3
SSBP4-206ENST00000599699 SWAP70Q9UH65 585 aa33.78■■■■□ 3
SSBP4-206ENST00000599699 RAB3GAP1Q15042 981 aa33.77■■■■□ 3
SSBP4-206ENST00000599699 CTU1Q7Z7A3 348 aaKnown RBP33.77■■■■□ 3
SSBP4-206ENST00000599699 ARPP21Q9UBL0 812 aaPredicted RBP33.77■■■■□ 3
SSBP4-206ENST00000599699 MPHOSPH10O00566 681 aaKnown RBP33.76■■■□□ 2.99
SSBP4-206ENST00000599699 TDO2P48775 406 aa33.76■■■□□ 2.99
SSBP4-206ENST00000599699 HMGCS2P54868 508 aa33.76■■■□□ 2.99
SSBP4-206ENST00000599699 GIMAP6Q6P9H5 292 aa33.76■■■□□ 2.99
SSBP4-206ENST00000599699 SLC44A5Q8NCS7 719 aa33.76■■■□□ 2.99
SSBP4-206ENST00000599699 MCOLN1Q9GZU1 580 aa33.76■■■□□ 2.99
SSBP4-206ENST00000599699 PHIPQ8WWQ0 1821 aa33.76■■■□□ 2.99
SSBP4-206ENST00000599699 TLR2O60603 784 aa33.75■■■□□ 2.99
SSBP4-206ENST00000599699 SP3Q02447 781 aa33.75■■■□□ 2.99
SSBP4-206ENST00000599699 MTMR2Q13614 643 aa33.75■■■□□ 2.99
SSBP4-206ENST00000599699 PARK7Q99497 189 aaKnown RBP33.75■■■□□ 2.99
SSBP4-206ENST00000599699 TAOK2Q9UL54 1235 aa33.75■■■□□ 2.99
SSBP4-206ENST00000599699 BAZ2AQ9UIF9 1905 aaKnown RBP33.75■■■□□ 2.99
SSBP4-206ENST00000599699 PATL2C9JE40 543 aaKnown RBP33.74■■■□□ 2.99
SSBP4-206ENST00000599699 NACAP1Q9BZK3 213 aa33.74■■■□□ 2.99
SSBP4-206ENST00000599699 MINDY4BA8MYZ0 360 aa33.73■■■□□ 2.99
SSBP4-206ENST00000599699 BACE1P56817 501 aa33.73■■■□□ 2.99
SSBP4-206ENST00000599699 PROCA1Q8NCQ7 364 aaPredicted RBP33.73■■■□□ 2.99
SSBP4-206ENST00000599699 ERO1AQ96HE7 468 aa33.73■■■□□ 2.99
SSBP4-206ENST00000599699 TMOD4Q9NZQ9 345 aa33.73■■■□□ 2.99
SSBP4-206ENST00000599699 AGTPBP1Q9UPW5 1226 aa33.73■■■□□ 2.99
SSBP4-206ENST00000599699 USP17L10C9JJH3 530 aa33.72■■■□□ 2.99
SSBP4-206ENST00000599699 SMIM22K7EJ46 135 aa33.72■■■□□ 2.99
SSBP4-206ENST00000599699 PDE4AP27815 886 aa33.72■■■□□ 2.99
SSBP4-206ENST00000599699 CCDC129Q6ZRS4 1044 aa33.72■■■□□ 2.99
SSBP4-206ENST00000599699 EPB41L4AQ9HCS5 686 aaPredicted RBP33.72■■■□□ 2.99
SSBP4-206ENST00000599699 CYP2C8P10632 490 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 CDK8P49336 464 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 SBK1Q52WX2 424 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 TREML2Q5T2D2 321 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 C16orf86Q6ZW13 317 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 TICAM2Q86XR7 235 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 CD99L2Q8TCZ2 262 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 FEZ1Q99689 392 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 HELLSQ9NRZ9 838 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 CPA4Q9UI42 421 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 SLC45A1Q9Y2W3 748 aa33.71■■■□□ 2.99
SSBP4-206ENST00000599699 SH3D19Q5HYK7 790 aa33.7■■■□□ 2.99
SSBP4-206ENST00000599699 IFNL3Q8IZI9 196 aa33.7■■■□□ 2.99
SSBP4-206ENST00000599699 FAM227BQ96M60 508 aa33.7■■■□□ 2.99
SSBP4-206ENST00000599699 C19orf81C9J6K1 198 aa33.69■■■□□ 2.98
SSBP4-206ENST00000599699 PABPC4Q13310 644 aaKnown RBP eCLIP33.69■■■□□ 2.981e-6■■■■□ 23.3
SSBP4-206ENST00000599699 SEPT2Q15019 361 aa33.69■■■□□ 2.98
SSBP4-206ENST00000599699 STK11IPQ8N1F8 1099 aa33.69■■■□□ 2.98
SSBP4-206ENST00000599699 IFFO2Q5TF58 517 aa33.68■■■□□ 2.98
SSBP4-206ENST00000599699 ABHD8Q96I13 439 aa33.68■■■□□ 2.98
SSBP4-206ENST00000599699 NAPBQ9H115 298 aa33.68■■■□□ 2.98
SSBP4-206ENST00000599699 PNMA3Q9UL41 463 aa33.68■■■□□ 2.98
SSBP4-206ENST00000599699 PTPRFP10586 1907 aa33.67■■■□□ 2.98
SSBP4-206ENST00000599699 A0A0D9SFI3 127 aa33.67■■■□□ 2.98
SSBP4-206ENST00000599699 CAPN15O75808 1086 aa33.67■■■□□ 2.98
SSBP4-206ENST00000599699 NMIQ13287 307 aaPredicted RBP33.67■■■□□ 2.98
SSBP4-206ENST00000599699 MCMDC2Q4G0Z9 681 aa33.67■■■□□ 2.98
SSBP4-206ENST00000599699 SMCR8Q8TEV9 937 aaPredicted RBP33.67■■■□□ 2.98
SSBP4-206ENST00000599699 TRIM17Q9Y577 477 aa33.67■■■□□ 2.98
SSBP4-206ENST00000599699 AKR1B1P15121 316 aa33.66■■■□□ 2.98
SSBP4-206ENST00000599699 SDSP20132 328 aa33.66■■■□□ 2.98
SSBP4-206ENST00000599699 GUCY1A2P33402 732 aa33.66■■■□□ 2.98
SSBP4-206ENST00000599699 ZYXQ15942 572 aaKnown RBP33.66■■■□□ 2.98
SSBP4-206ENST00000599699 USP17L2Q6R6M4 530 aa33.66■■■□□ 2.98
SSBP4-206ENST00000599699 C17orf99Q6UX52 265 aa33.66■■■□□ 2.98
SSBP4-206ENST00000599699 TMEM179Q6ZVK1 233 aa33.66■■■□□ 2.98
SSBP4-206ENST00000599699 CCDC17Q96LX7 622 aa33.66■■■□□ 2.98
SSBP4-206ENST00000599699 KIF22Q14807 665 aa33.65■■■□□ 2.98
SSBP4-206ENST00000599699 PKN2Q16513 984 aaKnown RBP33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms