RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 SPRYD7Q5W111 196 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 PAXIP1Q6ZW49 1069 aaPredicted RBP19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 ELP3Q9H9T3 547 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 AS3MTQ9HBK9 375 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 WDR33Q9C0J8 1336 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 USP17L5A8MUK1 530 aa19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 FAM155AB1AL88 458 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 PPP4R3BQ5MIZ7 849 aa19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 TMEM179Q6ZVK1 233 aa19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 ZNF444Q8N0Y2 327 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 DNAJC5GQ8N7S2 189 aa19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 OPTNQ96CV9 577 aa19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 DYNLL2Q96FJ2 89 aa19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 WNK4Q96J92 1243 aa19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 ZBTB21Q9ULJ3 1066 aa19.66■□□□□ 0.74
SHKBP1-219ENST00000599575 SIPA1L1O43166 1804 aa19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 MANSC4A6NHS7 340 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 CXCL11O14625 94 aa19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 ORC4O43929 436 aa19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 VEGFBP49765 207 aa19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 HTRA3P83110 453 aa19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 CYP4F22Q6NT55 531 aa19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 WDR18Q9BV38 432 aa19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 LSG1Q9H089 658 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 ANO2Q9NQ90 1003 aa19.65■□□□□ 0.74
SHKBP1-219ENST00000599575 GTF2A2P52657 109 aa19.64■□□□□ 0.73
SHKBP1-219ENST00000599575 AKNAD1Q5T1N1 836 aa19.64■□□□□ 0.73
SHKBP1-219ENST00000599575 MFSD6Q6ZSS7 791 aa19.64■□□□□ 0.73
SHKBP1-219ENST00000599575 STAG1Q8WVM7 1258 aa19.64■□□□□ 0.73
SHKBP1-219ENST00000599575 CNNM2Q9H8M5 875 aa19.64■□□□□ 0.73
SHKBP1-219ENST00000599575 KCNH4Q9UQ05 1017 aa19.64■□□□□ 0.73
SHKBP1-219ENST00000599575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.64■□□□□ 0.73
SHKBP1-219ENST00000599575 CEP350Q5VT06 3117 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 GH2P01242 217 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 SLURP2P0DP57 97 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 RASA1P20936 1047 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 PTH1RQ03431 593 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 SREBF2Q12772 1141 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 SNAPC2Q13487 334 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 RRP1BQ14684 758 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 RNF20Q5VTR2 975 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 SLC44A5Q8NCS7 719 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 OTUD5Q96G74 571 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 KANSL2Q9H9L4 492 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 AFG3L2Q9Y4W6 797 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 ZHX2Q9Y6X8 837 aa19.63■□□□□ 0.73
SHKBP1-219ENST00000599575 GDF11O95390 407 aa19.62■□□□□ 0.73
SHKBP1-219ENST00000599575 EVX2Q03828 476 aa19.62■□□□□ 0.73
SHKBP1-219ENST00000599575 ZNF280CQ8ND82 737 aa19.62■□□□□ 0.73
SHKBP1-219ENST00000599575 SYNPO2Q9UMS6 1093 aa19.62■□□□□ 0.73
SHKBP1-219ENST00000599575 BAZ2AQ9UIF9 1905 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-219ENST00000599575 PLIN4Q96Q06 1357 aa19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 TESPA1A2RU30 521 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 C19orf81C9J6K1 198 aa19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 MPHOSPH10O00566 681 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 IRF6O14896 467 aa19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 CETPP11597 493 aa19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 NEDD1Q8NHV4 660 aa19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 KRT23Q9C075 422 aa19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 SH2D4AQ9H788 454 aa19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 ZCCHC17Q9NP64 241 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 RBM8AQ9Y5S9 174 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-219ENST00000599575 LAMB1P07942 1786 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 SMIM22K7EJ46 135 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 TSPY3P0CV98 308 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 TSPY8P0CW00 308 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 TM4SF4P48230 202 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 MAP2K1Q02750 393 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 CTDSPL2Q05D32 466 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 NECTIN1Q15223 517 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 OTUD7BQ6GQQ9 843 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 FASTKD5Q7L8L6 764 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 ESR2Q92731 530 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 OTOFQ9HC10 1997 aa19.6■□□□□ 0.73
SHKBP1-219ENST00000599575 DOCK1Q14185 1865 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 ALDH1A1P00352 501 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 CYP21A2P08686 494 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 AKR1B1P15121 316 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 GJA5P36382 358 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 USP14P54578 494 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 HAND2P61296 217 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 KIF23Q02241 960 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 TRDNQ13061 729 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 RAB3GAP1Q15042 981 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 CCDC178Q5BJE1 867 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 JMYQ8N9B5 988 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 MS4A4AQ96JQ5 239 aa19.59■□□□□ 0.73
SHKBP1-219ENST00000599575 A0A0G2JLL6 359 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 TSPY2A6NKD2 308 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 USP17L10C9JJH3 530 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 PRDM1O75626 825 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 ZKSCAN1P17029 563 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 BACE1P56817 501 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 JAG1P78504 1218 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 TFAP4Q01664 338 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 SPP2Q13103 211 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 GRM1Q13255 1194 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 SEPT2Q15019 361 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 SH3D19Q5HYK7 790 aa19.58■□□□□ 0.72
SHKBP1-219ENST00000599575 PRRT2Q7Z6L0 340 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms