RNA–Protein interactions for RNA: ENST00000599464.1

PRKD2-213, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-213ENST00000599464 USP17L10C9JJH3 530 aa11.37□□□□□ -0.59
PRKD2-213ENST00000599464 GCLCP48506 637 aaPredicted RBP11.37□□□□□ -0.59
PRKD2-213ENST00000599464 BACE1P56817 501 aa11.37□□□□□ -0.59
PRKD2-213ENST00000599464 PRKCZQ05513 592 aa11.37□□□□□ -0.59
PRKD2-213ENST00000599464 RRP1BQ14684 758 aaKnown RBP11.37□□□□□ -0.59
PRKD2-213ENST00000599464 RAB3GAP1Q15042 981 aa11.37□□□□□ -0.59
PRKD2-213ENST00000599464 ZSCAN25Q6NSZ9 544 aa11.37□□□□□ -0.59
PRKD2-213ENST00000599464 WDR18Q9BV38 432 aa11.37□□□□□ -0.59
PRKD2-213ENST00000599464 DNAJC18Q9H819 358 aa11.37□□□□□ -0.59
PRKD2-213ENST00000599464 MCM9Q9NXL9 1143 aa11.37□□□□□ -0.59
PRKD2-213ENST00000599464 MPHOSPH10O00566 681 aaKnown RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 GH2P01242 217 aa11.36□□□□□ -0.59
PRKD2-213ENST00000599464 ATP5JP18859 108 aa11.36□□□□□ -0.59
PRKD2-213ENST00000599464 EN2P19622 333 aaPredicted RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 CTGFP29279 349 aa11.36□□□□□ -0.59
PRKD2-213ENST00000599464 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 FAM110CQ1W6H9 321 aa11.36□□□□□ -0.59
PRKD2-213ENST00000599464 CERKLQ49MI3 558 aaPredicted RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 SH3D19Q5HYK7 790 aa11.36□□□□□ -0.59
PRKD2-213ENST00000599464 PRPF38BQ5VTL8 546 aaKnown RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 CCAR1Q8IX12 1150 aaKnown RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
PRKD2-213ENST00000599464 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 RIOK1Q9BRS2 568 aaKnown RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 EHD4Q9H223 541 aa11.36□□□□□ -0.59
PRKD2-213ENST00000599464 CWC22Q9HCG8 908 aaKnown RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
PRKD2-213ENST00000599464 SMARCA5O60264 1052 aaPredicted RBP11.35□□□□□ -0.59
PRKD2-213ENST00000599464 ABCB5Q2M3G0 1257 aa11.35□□□□□ -0.59
PRKD2-213ENST00000599464 USP17L2Q6R6M4 530 aa11.35□□□□□ -0.59
PRKD2-213ENST00000599464 METTL16Q86W50 562 aaKnown RBP11.35□□□□□ -0.59
PRKD2-213ENST00000599464 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
PRKD2-213ENST00000599464 YTHDC1Q96MU7 727 aaKnown RBP11.35□□□□□ -0.59
PRKD2-213ENST00000599464 HAUS7Q99871 368 aa11.35□□□□□ -0.59
PRKD2-213ENST00000599464 ASCC2Q9H1I8 757 aaPredicted RBP11.35□□□□□ -0.59
PRKD2-213ENST00000599464 ARMT1Q9H993 441 aa11.35□□□□□ -0.59
PRKD2-213ENST00000599464 ADCY3O60266 1144 aa11.34□□□□□ -0.59
PRKD2-213ENST00000599464 MBD4O95243 580 aa11.34□□□□□ -0.59
PRKD2-213ENST00000599464 FLT3LGP49771 235 aa11.34□□□□□ -0.59
PRKD2-213ENST00000599464 USP14P54578 494 aa11.34□□□□□ -0.59
PRKD2-213ENST00000599464 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
PRKD2-213ENST00000599464 SDR42E1Q8WUS8 393 aa11.34□□□□□ -0.59
PRKD2-213ENST00000599464 RNF208Q9H0X6 261 aa11.34□□□□□ -0.59
PRKD2-213ENST00000599464 GABRQQ9UN88 632 aa11.34□□□□□ -0.59
PRKD2-213ENST00000599464 ZSWIM8A7E2V4 1837 aa11.33□□□□□ -0.6
PRKD2-213ENST00000599464 ADD2P35612 726 aa11.33□□□□□ -0.6
PRKD2-213ENST00000599464 PLCD1P51178 756 aa11.33□□□□□ -0.6
PRKD2-213ENST00000599464 JAG1P78504 1218 aa11.33□□□□□ -0.6
PRKD2-213ENST00000599464 MTFR1Q15390 333 aa11.33□□□□□ -0.6
PRKD2-213ENST00000599464 SHROOM1Q2M3G4 852 aaPredicted RBP11.33□□□□□ -0.6
PRKD2-213ENST00000599464 TATDN1Q6P1N9 297 aa11.33□□□□□ -0.6
PRKD2-213ENST00000599464 GTF3C2Q8WUA4 911 aaPredicted RBP11.33□□□□□ -0.6
PRKD2-213ENST00000599464 ATP8A2Q9NTI2 1148 aa11.33□□□□□ -0.6
PRKD2-213ENST00000599464 ECHDC1Q9NTX5 307 aa11.33□□□□□ -0.6
PRKD2-213ENST00000599464 ATAD5Q96QE3 1844 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 TCRBV5S4A2TA0A5A2 114 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 CCL5P13501 91 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
PRKD2-213ENST00000599464 RRP1P56182 461 aaKnown RBP11.32□□□□□ -0.6
PRKD2-213ENST00000599464 HERVK_113P62684 666 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 UBE3CQ15386 1083 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 LRRFIP1Q32MZ4 808 aaKnown RBP11.32□□□□□ -0.6
PRKD2-213ENST00000599464 PAGR1Q9BTK6 254 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 DCTPP1Q9H773 170 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 DCP1AQ9NPI6 582 aaPredicted RBP11.32□□□□□ -0.6
PRKD2-213ENST00000599464 SWAP70Q9UH65 585 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 HTTP42858 3142 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 FOCADQ5VW36 1801 aa11.32□□□□□ -0.6
PRKD2-213ENST00000599464 LOC285556D6RIA3 1793 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 SIPA1L1O43166 1804 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 PHIPQ8WWQ0 1821 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L15C9J2P7 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L13C9JLJ4 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L11C9JVI0 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L18D6R9N7 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L22D6RA61 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L17D6RBQ6 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L19D6RCP7 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L20D6RJB6 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 INHAP05111 366 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 ELNP15502 786 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 SHMT1P34896 483 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 USP17L24Q0WX57 530 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 IRF5Q13568 498 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 WDR78Q5VTH9 848 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
PRKD2-213ENST00000599464 MORF4L1Q9UBU8 362 aa11.31□□□□□ -0.6
PRKD2-213ENST00000599464 NAV1Q8NEY1 1877 aa11.3□□□□□ -0.6
PRKD2-213ENST00000599464 MYO5AQ9Y4I1 1855 aaKnown RBP11.3□□□□□ -0.6
PRKD2-213ENST00000599464 ERC2O15083 957 aa11.3□□□□□ -0.6
PRKD2-213ENST00000599464 PRKAB2O43741 272 aa11.3□□□□□ -0.6
PRKD2-213ENST00000599464 MAPK4P31152 587 aa11.3□□□□□ -0.6
PRKD2-213ENST00000599464 CCNA1P78396 465 aa11.3□□□□□ -0.6
PRKD2-213ENST00000599464 SEPT2Q15019 361 aa11.3□□□□□ -0.6
PRKD2-213ENST00000599464 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
PRKD2-213ENST00000599464 TMEM179Q6ZVK1 233 aa11.3□□□□□ -0.6
PRKD2-213ENST00000599464 SOCS4Q8WXH5 440 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms