RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 LCORLQ8N3X6 602 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 OSBP2Q969R2 916 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 TCHPQ9BT92 498 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 VPS72Q15906 364 aa16.67■□□□□ 0.26
SYMPK-213ENST00000599460 ZNF830Q96NB3 372 aaPredicted RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 GPR101Q96P66 508 aaPredicted RBP16.67■□□□□ 0.26
SYMPK-213ENST00000599460 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
SYMPK-213ENST00000599460 PRKAB2O43741 272 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 PIH1D3Q9NQM4 214 aaKnown RBP16.66■□□□□ 0.26
SYMPK-213ENST00000599460 VWDEQ8N2E2 1590 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 SMCO2A6NFE2 343 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 CCDC186Q7Z3E2 898 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 ALS2CR12Q96Q35 445 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 BIN2Q9UBW5 565 aaPredicted RBP16.66■□□□□ 0.26
SYMPK-213ENST00000599460 HSPA1LP34931 641 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 SETQ01105 290 aaPredicted RBP16.66■□□□□ 0.26
SYMPK-213ENST00000599460 DEPDC5O75140 1603 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 SPATA31A1Q5TZJ5 1347 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 AKR1B10O60218 316 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 PCP11498 1178 aaKnown RBP16.66■□□□□ 0.26
SYMPK-213ENST00000599460 CCDC65Q8IXS2 484 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
SYMPK-213ENST00000599460 TBC1D5Q92609 795 aa16.66■□□□□ 0.26
SYMPK-213ENST00000599460 CDHR2Q9BYE9 1310 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 BRD1O95696 1058 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 PDIA3P30101 505 aaKnown RBP16.65■□□□□ 0.26
SYMPK-213ENST00000599460 MTX1Q13505 466 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 HAUS3Q68CZ6 603 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 HS2ST1Q7LGA3 356 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 PHACTR2O75167 634 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 DPY19L2Q6NUT2 758 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 NSMFQ6X4W1 530 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 LUZP1Q86V48 1076 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 UIMC1Q96RL1 719 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 RGS12O14924 1447 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 NCAPH2Q6IBW4 605 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
SYMPK-213ENST00000599460 NEBLO76041 1014 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 DDAH1O94760 285 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 NOP2P46087 812 aaKnown RBP16.65■□□□□ 0.26
SYMPK-213ENST00000599460 SNW1Q13573 536 aaKnown RBP16.65■□□□□ 0.26
SYMPK-213ENST00000599460 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
SYMPK-213ENST00000599460 CCDC172P0C7W6 258 aa16.64■□□□□ 0.26
SYMPK-213ENST00000599460 CHURC1Q8WUH1 139 aa16.64■□□□□ 0.26
SYMPK-213ENST00000599460 FER1L4A9Z1Z3 1794 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 GOLGA6L9A6NEM1 432 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 ADRA2BP18089 450 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 ICA1Q05084 483 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 CLSTN2Q9H4D0 955 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 LRWD1Q9UFC0 647 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 PPLO60437 1756 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 KLRF2D3W0D1 207 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 MCAMP43121 646 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 CALCRLQ16602 461 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 FERMT2Q96AC1 680 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 AS3MTQ9HBK9 375 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 FAM193AP78312 1265 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 UBXN1Q04323 297 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 SCRN1Q12765 414 aa16.64■□□□□ 0.25
SYMPK-213ENST00000599460 PDE4DQ08499 809 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 SKILP12757 684 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 MECOMQ03112 1051 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 CENPHQ9H3R5 247 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 CSADQ9Y600 493 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 TMCO5BA8MYB1 307 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 DDX39AO00148 427 aaKnown RBP16.63■□□□□ 0.25
SYMPK-213ENST00000599460 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 ZNF202O95125 648 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 DCAF15Q66K64 600 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 IFNKQ9P0W0 207 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 PAFAH1B1P43034 410 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 ABCB5Q2M3G0 1257 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 MYSM1Q5VVJ2 828 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 SNX29Q8TEQ0 813 aa16.63■□□□□ 0.25
SYMPK-213ENST00000599460 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.63■□□□□ 0.25
SYMPK-213ENST00000599460 ITSN1Q15811 1721 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 DIXDC1Q155Q3 683 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 MYL5Q02045 173 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 MINPP1Q9UNW1 487 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 RAD17O75943 681 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 IRX3P78415 501 aaPredicted RBP16.62■□□□□ 0.25
SYMPK-213ENST00000599460 TXNRD1Q16881 649 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 NOSTRINQ8IVI9 506 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 BLIDQ8IZY5 108 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
SYMPK-213ENST00000599460 IVNS1ABPQ9Y6Y0 642 aa16.62■□□□□ 0.25
SYMPK-213ENST00000599460 EIF3JO75822 258 aaKnown RBP16.61■□□□□ 0.25
SYMPK-213ENST00000599460 CSRNP1Q96S65 589 aa16.61■□□□□ 0.25
SYMPK-213ENST00000599460 SOS2Q07890 1332 aaPredicted RBP16.61■□□□□ 0.25
SYMPK-213ENST00000599460 SCG2P13521 617 aa16.61■□□□□ 0.25
SYMPK-213ENST00000599460 CYLC1P35663 651 aaPredicted RBP16.61■□□□□ 0.25
SYMPK-213ENST00000599460 SNAP23O00161 211 aa16.61■□□□□ 0.25
SYMPK-213ENST00000599460 CELF1Q92879 486 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms