RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 NACAP1Q9BZK3 213 aa21.73■■□□□ 1.07
LIG1-216ENST00000598938 DNAJC18Q9H819 358 aa21.73■■□□□ 1.07
LIG1-216ENST00000598938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.73■■□□□ 1.07
LIG1-216ENST00000598938 ARPP21Q9UBL0 812 aaPredicted RBP21.73■■□□□ 1.07
LIG1-216ENST00000598938 TRIM17Q9Y577 477 aa21.73■■□□□ 1.07
LIG1-216ENST00000598938 TDO2P48775 406 aa21.72■■□□□ 1.07
LIG1-216ENST00000598938 MAP3K9P80192 1104 aa21.72■■□□□ 1.07
LIG1-216ENST00000598938 ALX1Q15699 326 aa21.72■■□□□ 1.07
LIG1-216ENST00000598938 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.72■■□□□ 1.07
LIG1-216ENST00000598938 OTOP1Q7RTM1 612 aa21.72■■□□□ 1.07
LIG1-216ENST00000598938 CRACR2BQ8N4Y2 399 aaPredicted RBP21.72■■□□□ 1.07
LIG1-216ENST00000598938 ERO1AQ96HE7 468 aa21.72■■□□□ 1.07
LIG1-216ENST00000598938 WNK4Q96J92 1243 aa21.72■■□□□ 1.07
LIG1-216ENST00000598938 SERPINB13Q9UIV8 391 aa21.72■■□□□ 1.07
LIG1-216ENST00000598938 CYP2D7A0A087X1C5 515 aa21.71■■□□□ 1.07
LIG1-216ENST00000598938 HSPD1P10809 573 aaKnown RBP21.71■■□□□ 1.07
LIG1-216ENST00000598938 GABPAQ06546 454 aa21.71■■□□□ 1.07
LIG1-216ENST00000598938 OTUD7BQ6GQQ9 843 aa21.71■■□□□ 1.07
LIG1-216ENST00000598938 AMOTL1Q8IY63 956 aa21.71■■□□□ 1.07
LIG1-216ENST00000598938 CLMNQ96JQ2 1002 aa21.71■■□□□ 1.07
LIG1-216ENST00000598938 TAOK2Q9UL54 1235 aa21.71■■□□□ 1.07
LIG1-216ENST00000598938 SGSM2O43147 1006 aa21.7■■□□□ 1.06
LIG1-216ENST00000598938 CDC45O75419 566 aa21.7■■□□□ 1.06
LIG1-216ENST00000598938 INPP5BP32019 993 aa21.7■■□□□ 1.06
LIG1-216ENST00000598938 VGLL4Q14135 290 aa21.7■■□□□ 1.06
LIG1-216ENST00000598938 NAPBQ9H115 298 aa21.7■■□□□ 1.06
LIG1-216ENST00000598938 ZMYM6O95789 1325 aa21.7■■□□□ 1.06
LIG1-216ENST00000598938 SMIM22K7EJ46 135 aa21.69■■□□□ 1.06
LIG1-216ENST00000598938 IGF2BP3O00425 579 aaKnown RBP eCLIP21.69■■□□□ 1.06
LIG1-216ENST00000598938 NOL9Q5SY16 702 aaKnown RBP21.69■■□□□ 1.06
LIG1-216ENST00000598938 TATDN1Q6P1N9 297 aa21.69■■□□□ 1.06
LIG1-216ENST00000598938 ZKSCAN4Q969J2 545 aaPredicted RBP21.69■■□□□ 1.06
LIG1-216ENST00000598938 TRIM34Q9BYJ4 488 aa21.69■■□□□ 1.06
LIG1-216ENST00000598938 CSADQ9Y600 493 aa21.69■■□□□ 1.06
LIG1-216ENST00000598938 SNCAIPQ9Y6H5 919 aa21.69■■□□□ 1.06
LIG1-216ENST00000598938 KIAA0100Q14667 2235 aaKnown RBP21.69■■□□□ 1.06
LIG1-216ENST00000598938 ROBO3Q96MS0 1386 aa21.69■■□□□ 1.06
LIG1-216ENST00000598938 MKI67P46013 3256 aaKnown RBP21.68■■□□□ 1.06
LIG1-216ENST00000598938 RRP1BQ14684 758 aaKnown RBP21.68■■□□□ 1.06
LIG1-216ENST00000598938 ESYT1Q9BSJ8 1104 aa21.68■■□□□ 1.06
LIG1-216ENST00000598938 DSCC1Q9BVC3 393 aa21.68■■□□□ 1.06
LIG1-216ENST00000598938 PTPN22Q9Y2R2 807 aa21.68■■□□□ 1.06
LIG1-216ENST00000598938 CTNND1O60716 968 aaKnown RBP21.67■■□□□ 1.06
LIG1-216ENST00000598938 FGAP02671 866 aa21.67■■□□□ 1.06
LIG1-216ENST00000598938 SHMT1P34896 483 aa21.67■■□□□ 1.06
LIG1-216ENST00000598938 C16orf86Q6ZW13 317 aa21.67■■□□□ 1.06
LIG1-216ENST00000598938 ARMC5Q96C12 935 aa21.67■■□□□ 1.06
LIG1-216ENST00000598938 DYNLL2Q96FJ2 89 aa21.67■■□□□ 1.06
LIG1-216ENST00000598938 ELP3Q9H9T3 547 aa21.67■■□□□ 1.06
LIG1-216ENST00000598938 SWAP70Q9UH65 585 aa21.67■■□□□ 1.06
LIG1-216ENST00000598938 CENPFP49454 3210 aa21.67■■□□□ 1.06
LIG1-216ENST00000598938 TESPA1A2RU30 521 aaPredicted RBP21.66■■□□□ 1.06
LIG1-216ENST00000598938 MINDY4BA8MYZ0 360 aa21.66■■□□□ 1.06
LIG1-216ENST00000598938 HABP4Q5JVS0 413 aaKnown RBP21.66■■□□□ 1.06
LIG1-216ENST00000598938 SCYL3Q8IZE3 742 aa21.66■■□□□ 1.06
LIG1-216ENST00000598938 DOCK1Q14185 1865 aa21.65■■□□□ 1.06
LIG1-216ENST00000598938 POTEFA5A3E0 1075 aa21.65■■□□□ 1.06
LIG1-216ENST00000598938 CAP2P40123 477 aa21.65■■□□□ 1.06
LIG1-216ENST00000598938 PPARAQ07869 468 aa21.65■■□□□ 1.06
LIG1-216ENST00000598938 CASC1Q6TDU7 716 aa21.65■■□□□ 1.06
LIG1-216ENST00000598938 SLC44A5Q8NCS7 719 aa21.65■■□□□ 1.06
LIG1-216ENST00000598938 ANAPC4Q9UJX5 808 aa21.65■■□□□ 1.06
LIG1-216ENST00000598938 SPDYE5A6NIY4 337 aa21.64■■□□□ 1.05
LIG1-216ENST00000598938 CDK8P49336 464 aa21.64■■□□□ 1.05
LIG1-216ENST00000598938 CRHR2Q13324 411 aa21.64■■□□□ 1.05
LIG1-216ENST00000598938 GJA5P36382 358 aa21.63■■□□□ 1.05
LIG1-216ENST00000598938 JAG1P78504 1218 aa21.63■■□□□ 1.05
LIG1-216ENST00000598938 PTH1RQ03431 593 aa21.63■■□□□ 1.05
LIG1-216ENST00000598938 CERKLQ49MI3 558 aaPredicted RBP21.63■■□□□ 1.05
LIG1-216ENST00000598938 ERO1BQ86YB8 467 aa21.63■■□□□ 1.05
LIG1-216ENST00000598938 OPTNQ96CV9 577 aa21.63■■□□□ 1.05
LIG1-216ENST00000598938 EFCC1Q9HA90 598 aa21.63■■□□□ 1.05
LIG1-216ENST00000598938 GINM1Q9NU53 330 aa21.63■■□□□ 1.05
LIG1-216ENST00000598938 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.63■■□□□ 1.05
LIG1-216ENST00000598938 ATAD5Q96QE3 1844 aa21.62■■□□□ 1.05
LIG1-216ENST00000598938 GDF11O95390 407 aa21.62■■□□□ 1.05
LIG1-216ENST00000598938 SP3Q02447 781 aa21.62■■□□□ 1.05
LIG1-216ENST00000598938 ARHGEF6Q15052 776 aa21.62■■□□□ 1.05
LIG1-216ENST00000598938 SHROOM1Q2M3G4 852 aaPredicted RBP21.62■■□□□ 1.05
LIG1-216ENST00000598938 CD99L2Q8TCZ2 262 aa21.62■■□□□ 1.05
LIG1-216ENST00000598938 CNKSR2Q8WXI2 1034 aa21.62■■□□□ 1.05
LIG1-216ENST00000598938 PICK1Q9NRD5 415 aa21.62■■□□□ 1.05
LIG1-216ENST00000598938 ASNSP08243 561 aa21.61■■□□□ 1.05
LIG1-216ENST00000598938 PTPRAP18433 802 aa21.61■■□□□ 1.05
LIG1-216ENST00000598938 PPATQ06203 517 aa21.61■■□□□ 1.05
LIG1-216ENST00000598938 LSG1Q9H089 658 aaKnown RBP21.61■■□□□ 1.05
LIG1-216ENST00000598938 CTNNA3Q9UI47 895 aa21.61■■□□□ 1.05
LIG1-216ENST00000598938 ZBTB21Q9ULJ3 1066 aa21.61■■□□□ 1.05
LIG1-216ENST00000598938 LAMA4Q16363 1823 aa21.61■■□□□ 1.05
LIG1-216ENST00000598938 BRCA2P51587 3418 aa21.6■■□□□ 1.05
LIG1-216ENST00000598938 SLC3A2P08195 630 aaKnown RBP21.6■■□□□ 1.05
LIG1-216ENST00000598938 CTDSPL2Q05D32 466 aa21.6■■□□□ 1.05
LIG1-216ENST00000598938 PPIL2Q13356 520 aa21.6■■□□□ 1.05
LIG1-216ENST00000598938 ABCB5Q2M3G0 1257 aa21.6■■□□□ 1.05
LIG1-216ENST00000598938 MAP4K1Q92918 833 aa21.6■■□□□ 1.05
LIG1-216ENST00000598938 OTUD5Q96G74 571 aa21.6■■□□□ 1.05
LIG1-216ENST00000598938 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.6■■□□□ 1.05
LIG1-216ENST00000598938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
LIG1-216ENST00000598938 GH2P01242 217 aa21.59■■□□□ 1.05
LIG1-216ENST00000598938 RASA1P20936 1047 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms