RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 RAB3GAP1Q15042 981 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 MICU3Q86XE3 530 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 ZNF444Q8N0Y2 327 aaPredicted RBP27.36■■□□□ 1.97
SYMPK-212ENST00000598896 DHX36Q9H2U1 1008 aaKnown RBP27.36■■□□□ 1.97
SYMPK-212ENST00000598896 IL17RBQ9NRM6 502 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 SLC12A7Q9Y666 1083 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 ATRNL1Q5VV63 1379 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 TCP10L2B9ZVM9 353 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 HLA-DOAP06340 250 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 NSUN7Q8NE18 718 aaKnown RBP27.36■■□□□ 1.97
SYMPK-212ENST00000598896 EHD4Q9H223 541 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 TMOD2Q9NZR1 351 aa27.36■■□□□ 1.97
SYMPK-212ENST00000598896 ZBTB43O43298 467 aa27.35■■□□□ 1.97
SYMPK-212ENST00000598896 TSPY3P0CV98 308 aa27.35■■□□□ 1.97
SYMPK-212ENST00000598896 TSPY8P0CW00 308 aa27.35■■□□□ 1.97
SYMPK-212ENST00000598896 DNAJC18Q9H819 358 aa27.35■■□□□ 1.97
SYMPK-212ENST00000598896 CNOT7Q9UIV1 285 aaKnown RBP27.35■■□□□ 1.97
SYMPK-212ENST00000598896 ZDHHC9Q9Y397 364 aa27.35■■□□□ 1.97
SYMPK-212ENST00000598896 COL2A1P02458 1487 aaPredicted RBP27.34■■□□□ 1.97
SYMPK-212ENST00000598896 MMP14P50281 582 aa27.34■■□□□ 1.97
SYMPK-212ENST00000598896 RCSD1Q6JBY9 416 aa27.34■■□□□ 1.97
SYMPK-212ENST00000598896 ZSCAN29Q8IWY8 852 aaPredicted RBP27.34■■□□□ 1.97
SYMPK-212ENST00000598896 TMTC2Q8N394 836 aa27.34■■□□□ 1.97
SYMPK-212ENST00000598896 RNF181Q9P0P0 153 aa27.34■■□□□ 1.97
SYMPK-212ENST00000598896 CNTNAP1P78357 1384 aa27.34■■□□□ 1.97
SYMPK-212ENST00000598896 METAP2P50579 478 aaKnown RBP eCLIP27.34■■□□□ 1.97
SYMPK-212ENST00000598896 IFIT1BQ5T764 474 aaKnown RBP27.34■■□□□ 1.97
SYMPK-212ENST00000598896 SAMD7Q7Z3H4 446 aa27.34■■□□□ 1.97
SYMPK-212ENST00000598896 SMARCC2Q8TAQ2 1214 aa27.34■■□□□ 1.97
SYMPK-212ENST00000598896 LLPHQ9BRT6 129 aaKnown RBP27.34■■□□□ 1.97
SYMPK-212ENST00000598896 SHMT1P34896 483 aa27.33■■□□□ 1.97
SYMPK-212ENST00000598896 RBM26Q5T8P6 1007 aaKnown RBP27.33■■□□□ 1.97
SYMPK-212ENST00000598896 CCDC144CPQ8IYA2 1237 aa27.33■■□□□ 1.97
SYMPK-212ENST00000598896 ZNF654Q8IZM8 581 aa27.33■■□□□ 1.97
SYMPK-212ENST00000598896 GPC2Q8N158 579 aa27.33■■□□□ 1.97
SYMPK-212ENST00000598896 VEZTQ9HBM0 779 aa27.33■■□□□ 1.97
SYMPK-212ENST00000598896 PI4KBQ9UBF8 816 aa27.33■■□□□ 1.97
SYMPK-212ENST00000598896 PPFIA3O75145 1194 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 CDC27P30260 824 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 NUCB2P80303 420 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 SWAP70Q9UH65 585 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 NID2Q14112 1375 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 PTPDC1A2A3K4 754 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 FAM196BA6NMK8 535 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 MYO1BO43795 1136 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 FAM217BQ9NTX9 383 aaPredicted RBP27.32■■□□□ 1.96
SYMPK-212ENST00000598896 TCP11L1Q9NUJ3 509 aa27.32■■□□□ 1.96
SYMPK-212ENST00000598896 SYT1P21579 422 aa27.31■■□□□ 1.96
SYMPK-212ENST00000598896 ADD1P35611 737 aaKnown RBP27.31■■□□□ 1.96
SYMPK-212ENST00000598896 NEDD1Q8NHV4 660 aa27.31■■□□□ 1.96
SYMPK-212ENST00000598896 DDX11Q96FC9 970 aa27.31■■□□□ 1.96
SYMPK-212ENST00000598896 GOLGA8AA7E2F4 631 aa27.3■■□□□ 1.96
SYMPK-212ENST00000598896 TBC1D10BQ4KMP7 808 aaPredicted RBP27.3■■□□□ 1.96
SYMPK-212ENST00000598896 FKBP1CQ5VVH2 108 aa27.3■■□□□ 1.96
SYMPK-212ENST00000598896 FAM151AQ8WW52 585 aa27.3■■□□□ 1.96
SYMPK-212ENST00000598896 TNPO1Q92973 898 aaKnown RBP27.3■■□□□ 1.96
SYMPK-212ENST00000598896 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.3■■□□□ 1.96
SYMPK-212ENST00000598896 PLIN4Q96Q06 1357 aa27.3■■□□□ 1.96
SYMPK-212ENST00000598896 C9orf131Q5VYM1 1079 aa27.3■■□□□ 1.96
SYMPK-212ENST00000598896 SYNE3Q6ZMZ3 975 aa27.3■■□□□ 1.96
SYMPK-212ENST00000598896 CRACR2BQ8N4Y2 399 aaPredicted RBP27.3■■□□□ 1.96
SYMPK-212ENST00000598896 BRD1O95696 1058 aa27.29■■□□□ 1.96
SYMPK-212ENST00000598896 AKR1B1P15121 316 aa27.29■■□□□ 1.96
SYMPK-212ENST00000598896 METTL16Q86W50 562 aaKnown RBP27.29■■□□□ 1.96
SYMPK-212ENST00000598896 DGKHQ86XP1 1220 aa27.29■■□□□ 1.96
SYMPK-212ENST00000598896 CSRNP1Q96S65 589 aa27.29■■□□□ 1.96
SYMPK-212ENST00000598896 GPRC5DQ9NZD1 345 aa27.29■■□□□ 1.96
SYMPK-212ENST00000598896 ASTN2O75129 1339 aaPredicted RBP27.29■■□□□ 1.96
SYMPK-212ENST00000598896 DHX16O60231 1041 aaKnown RBP27.28■■□□□ 1.96
SYMPK-212ENST00000598896 CDAN1Q8IWY9 1227 aa27.28■■□□□ 1.96
SYMPK-212ENST00000598896 NUP133Q8WUM0 1156 aa27.28■■□□□ 1.96
SYMPK-212ENST00000598896 SCAF8Q9UPN6 1271 aaKnown RBP27.28■■□□□ 1.96
SYMPK-212ENST00000598896 GREB1LQ9C091 1923 aaPredicted RBP27.28■■□□□ 1.96
SYMPK-212ENST00000598896 RCAN1P53805 252 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 TROAPQ12815 778 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 GPR162Q16538 588 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 KIF4BQ2VIQ3 1234 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 ANKS1AQ92625 1134 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 TMEM39BQ9GZU3 492 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 CPLX1O14810 134 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 DDNO94850 711 aaPredicted RBP27.27■■□□□ 1.96
SYMPK-212ENST00000598896 FDPSP14324 419 aaKnown RBP27.27■■□□□ 1.96
SYMPK-212ENST00000598896 NTRK3Q16288 839 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 FOXD4L5Q5VV16 416 aaPredicted RBP27.27■■□□□ 1.96
SYMPK-212ENST00000598896 CATIPQ7Z7H3 387 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 FAM83AQ86UY5 434 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 FOXP4Q8IVH2 680 aaPredicted RBP27.27■■□□□ 1.96
SYMPK-212ENST00000598896 FOXD4L4Q8WXT5 416 aaPredicted RBP27.27■■□□□ 1.96
SYMPK-212ENST00000598896 CHMP4CQ96CF2 233 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 CEP95Q96GE4 821 aa27.27■■□□□ 1.96
SYMPK-212ENST00000598896 STX6O43752 255 aa27.26■■□□□ 1.95
SYMPK-212ENST00000598896 FANCBQ8NB91 859 aa27.26■■□□□ 1.95
SYMPK-212ENST00000598896 HMGN5P82970 282 aaKnown RBP27.25■■□□□ 1.95
SYMPK-212ENST00000598896 RTN1Q16799 776 aa27.25■■□□□ 1.95
SYMPK-212ENST00000598896 STX8Q9UNK0 236 aa27.25■■□□□ 1.95
SYMPK-212ENST00000598896 H7C1D1 291 aa27.25■■□□□ 1.95
SYMPK-212ENST00000598896 SOCS7O14512 581 aa27.25■■□□□ 1.95
SYMPK-212ENST00000598896 CCDC178Q5BJE1 867 aa27.25■■□□□ 1.95
SYMPK-212ENST00000598896 LARP1BQ659C4 914 aaKnown RBP27.25■■□□□ 1.95
SYMPK-212ENST00000598896 TATDN1Q6P1N9 297 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms