RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 HOXA7P31268 230 aaPredicted RBP13.52□□□□□ -0.25
GRAMD1A-209ENST00000598580 GCLCP48506 637 aaPredicted RBP13.52□□□□□ -0.25
GRAMD1A-209ENST00000598580 EVX2Q03828 476 aa13.52□□□□□ -0.25
GRAMD1A-209ENST00000598580 MIGA1Q8NAN2 632 aa13.52□□□□□ -0.25
GRAMD1A-209ENST00000598580 COA7Q96BR5 231 aa13.52□□□□□ -0.25
GRAMD1A-209ENST00000598580 PAWRQ96IZ0 340 aaKnown RBP13.52□□□□□ -0.25
GRAMD1A-209ENST00000598580 DHX36Q9H2U1 1008 aaKnown RBP13.52□□□□□ -0.25
GRAMD1A-209ENST00000598580 LOC285556D6RIA3 1793 aa13.51□□□□□ -0.25
GRAMD1A-209ENST00000598580 BAG3O95817 575 aa13.51□□□□□ -0.25
GRAMD1A-209ENST00000598580 OS9Q13438 667 aaPredicted RBP13.51□□□□□ -0.25
GRAMD1A-209ENST00000598580 CEP85Q6P2H3 762 aa13.51□□□□□ -0.25
GRAMD1A-209ENST00000598580 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
GRAMD1A-209ENST00000598580 TRIB2Q92519 343 aa13.51□□□□□ -0.25
GRAMD1A-209ENST00000598580 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.51□□□□□ -0.252e-7■□□□□ 8.3
GRAMD1A-209ENST00000598580 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
GRAMD1A-209ENST00000598580 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
GRAMD1A-209ENST00000598580 MYO5AQ9Y4I1 1855 aaKnown RBP13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 ASNSP08243 561 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 PLCG2P16885 1265 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 TATDN1Q6P1N9 297 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 USP6NLQ92738 828 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 HTATIP2Q9BUP3 242 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 PORCNQ9H237 461 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 LAMA3Q16787 3333 aa13.5□□□□□ -0.25
GRAMD1A-209ENST00000598580 PLXNB2O15031 1838 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 USP17L10C9JJH3 530 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 SOX1O00570 391 aaPredicted RBP13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 CNMDO75829 334 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 GH2P01242 217 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 HMGCRP04035 888 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 CYP2B6P20813 491 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 HERVK_113P62684 666 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 HNRNPUQ00839 825 aaKnown RBP eCLIP13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 ACER1Q8TDN7 264 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 STAP2Q9UGK3 403 aa13.49□□□□□ -0.25
GRAMD1A-209ENST00000598580 C19orf81C9J6K1 198 aa13.48□□□□□ -0.25
GRAMD1A-209ENST00000598580 PLCD1P51178 756 aa13.48□□□□□ -0.25
GRAMD1A-209ENST00000598580 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.25
GRAMD1A-209ENST00000598580 CCL14Q16627 93 aa13.48□□□□□ -0.25
GRAMD1A-209ENST00000598580 SIRT2Q8IXJ6 389 aa13.48□□□□□ -0.25
GRAMD1A-209ENST00000598580 CRACR2BQ8N4Y2 399 aaPredicted RBP13.48□□□□□ -0.25
GRAMD1A-209ENST00000598580 GPRC5AQ8NFJ5 357 aa13.48□□□□□ -0.25
GRAMD1A-209ENST00000598580 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
GRAMD1A-209ENST00000598580 RPTORQ8N122 1335 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 CDK5RAP2Q96SN8 1893 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 EVI5O60447 810 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 SHMT1P34896 483 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 IRX3P78415 501 aaPredicted RBP13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 SLFNL1Q499Z3 407 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 MORN1Q5T089 497 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 AACSQ86V21 672 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 IL1RAPL2Q9NP60 686 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 ATAD5Q96QE3 1844 aa13.47□□□□□ -0.25
GRAMD1A-209ENST00000598580 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
GRAMD1A-209ENST00000598580 CACNB2Q08289 660 aaPredicted RBP13.46□□□□□ -0.25
GRAMD1A-209ENST00000598580 ZYXQ15942 572 aaKnown RBP13.46□□□□□ -0.25
GRAMD1A-209ENST00000598580 FTSJ3Q8IY81 847 aaKnown RBP13.46□□□□□ -0.25
GRAMD1A-209ENST00000598580 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.25
GRAMD1A-209ENST00000598580 HMX1Q9NP08 348 aaPredicted RBP13.46□□□□□ -0.25
GRAMD1A-209ENST00000598580 OGDHLQ9ULD0 1010 aa13.46□□□□□ -0.25
GRAMD1A-209ENST00000598580 IGSF3O75054 1194 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 CHGBP05060 677 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 XRCC5P13010 732 aaKnown RBP13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 ERVK-9P63128 1117 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 ERVK-24P63145 666 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 KIAA1755Q5JYT7 1200 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 LHX8Q68G74 356 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 USP17L2Q6R6M4 530 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 GPR142Q7Z601 462 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 NECAB2Q7Z6G3 386 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 RHPN1Q8TCX5 695 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 LRCH3Q96II8 777 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 C12orf42Q96LP6 360 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 PAGR1Q9BTK6 254 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 EHD4Q9H223 541 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 GINM1Q9NU53 330 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 FLRT1Q9NZU1 646 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 BTBD7Q9P203 1132 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 ALPK3Q96L96 1907 aa13.45□□□□□ -0.26
GRAMD1A-209ENST00000598580 PFASO15067 1338 aa13.44□□□□□ -0.26
GRAMD1A-209ENST00000598580 FOCADQ5VW36 1801 aa13.44□□□□□ -0.26
GRAMD1A-209ENST00000598580 A0A1W2PRG0 241 aa13.44□□□□□ -0.26
GRAMD1A-209ENST00000598580 TCRBV5S4A2TA0A5A2 114 aa13.44□□□□□ -0.26
GRAMD1A-209ENST00000598580 HLA-DOAP06340 250 aa13.44□□□□□ -0.26
GRAMD1A-209ENST00000598580 CYP2D6P10635 497 aa13.44□□□□□ -0.26
GRAMD1A-209ENST00000598580 USP5P45974 858 aa13.44□□□□□ -0.26
GRAMD1A-209ENST00000598580 GABPAQ06546 454 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms