RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 BACE1P56817 501 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 SLC9C1Q4G0N8 1177 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 TREML2Q5T2D2 321 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 FEZ1Q99689 392 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
XRCC1-208ENST00000598422 PTCH2Q9Y6C5 1203 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 BCRP11274 1271 aa17.62■□□□□ 0.41
XRCC1-208ENST00000598422 PLCD1P51178 756 aa17.62■□□□□ 0.41
XRCC1-208ENST00000598422 PRMT2P55345 433 aa17.62■□□□□ 0.41
XRCC1-208ENST00000598422 FCGRTP55899 365 aa17.62■□□□□ 0.41
XRCC1-208ENST00000598422 SHROOM1Q2M3G4 852 aaPredicted RBP17.62■□□□□ 0.41
XRCC1-208ENST00000598422 SLFNL1Q499Z3 407 aa17.62■□□□□ 0.41
XRCC1-208ENST00000598422 CERKLQ49MI3 558 aaPredicted RBP17.62■□□□□ 0.41
XRCC1-208ENST00000598422 CABP5Q9NP86 173 aa17.62■□□□□ 0.41
XRCC1-208ENST00000598422 TTC41PQ6P2S7 1318 aa17.62■□□□□ 0.41
XRCC1-208ENST00000598422 USP17L10C9JJH3 530 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 IRX3P78415 501 aaPredicted RBP17.61■□□□□ 0.41
XRCC1-208ENST00000598422 JAG1P78504 1218 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 ABCB5Q2M3G0 1257 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
XRCC1-208ENST00000598422 SH3D19Q5HYK7 790 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 TATDN1Q6P1N9 297 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 NBPF11Q86T75 865 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 KBTBD3Q8NAB2 608 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 TRIM47Q96LD4 638 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 ATP8A2Q9NTI2 1148 aa17.61■□□□□ 0.41
XRCC1-208ENST00000598422 C19orf81C9J6K1 198 aa17.6■□□□□ 0.41
XRCC1-208ENST00000598422 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
XRCC1-208ENST00000598422 AAMPQ13685 434 aa17.6■□□□□ 0.41
XRCC1-208ENST00000598422 ARMC5Q96C12 935 aa17.6■□□□□ 0.41
XRCC1-208ENST00000598422 SLC4A4Q9Y6R1 1079 aa17.6■□□□□ 0.41
XRCC1-208ENST00000598422 MYPNQ86TC9 1320 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 MPHOSPH10O00566 681 aaKnown RBP17.59■□□□□ 0.41
XRCC1-208ENST00000598422 PRKAB2O43741 272 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 CHGBP05060 677 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 MX1P20591 662 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 SHMT1P34896 483 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 GCLCP48506 637 aaPredicted RBP17.59■□□□□ 0.41
XRCC1-208ENST00000598422 HDAC1Q13547 482 aaPredicted RBP17.59■□□□□ 0.41
XRCC1-208ENST00000598422 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 ANKRD13CQ8N6S4 541 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 RAET1EQ8TD07 263 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 GCC1Q96CN9 775 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 ASCC2Q9H1I8 757 aaPredicted RBP17.59■□□□□ 0.41
XRCC1-208ENST00000598422 SRRDQ9UH36 339 aa17.59■□□□□ 0.41
XRCC1-208ENST00000598422 ZFYP08048 801 aaPredicted RBP17.58■□□□□ 0.4
XRCC1-208ENST00000598422 CYP2D6P10635 497 aa17.58■□□□□ 0.4
XRCC1-208ENST00000598422 GABPAQ06546 454 aa17.58■□□□□ 0.4
XRCC1-208ENST00000598422 FAM110CQ1W6H9 321 aa17.58■□□□□ 0.4
XRCC1-208ENST00000598422 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.4
XRCC1-208ENST00000598422 OTUD7AQ8TE49 926 aaPredicted RBP17.58■□□□□ 0.4
XRCC1-208ENST00000598422 APPBP2Q92624 585 aa17.58■□□□□ 0.4
XRCC1-208ENST00000598422 PUS7LQ9H0K6 701 aaKnown RBP17.58■□□□□ 0.4
XRCC1-208ENST00000598422 SWAP70Q9UH65 585 aa17.58■□□□□ 0.4
XRCC1-208ENST00000598422 TAOK2Q9UL54 1235 aa17.58■□□□□ 0.4
XRCC1-208ENST00000598422 MYO5AQ9Y4I1 1855 aaKnown RBP17.58■□□□□ 0.4
XRCC1-208ENST00000598422 SIPA1L1O43166 1804 aa17.57■□□□□ 0.4
XRCC1-208ENST00000598422 TNPO2O14787 897 aaKnown RBP17.57■□□□□ 0.4
XRCC1-208ENST00000598422 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
XRCC1-208ENST00000598422 CTGFP29279 349 aa17.57■□□□□ 0.4
XRCC1-208ENST00000598422 USP14P54578 494 aa17.57■□□□□ 0.4
XRCC1-208ENST00000598422 ZYXQ15942 572 aaKnown RBP17.57■□□□□ 0.4
XRCC1-208ENST00000598422 SLC44A5Q8NCS7 719 aa17.57■□□□□ 0.4
XRCC1-208ENST00000598422 ZNF333Q96JL9 665 aa17.57■□□□□ 0.4
XRCC1-208ENST00000598422 FSD1Q9BTV5 496 aa17.57■□□□□ 0.4
XRCC1-208ENST00000598422 TMEM106CQ9BVX2 250 aa17.57■□□□□ 0.4
XRCC1-208ENST00000598422 FOCADQ5VW36 1801 aa17.56■□□□□ 0.4
XRCC1-208ENST00000598422 USP17L12C9JPN9 530 aa17.56■□□□□ 0.4
XRCC1-208ENST00000598422 USP17L21D6R901 530 aa17.56■□□□□ 0.4
XRCC1-208ENST00000598422 PRKCZQ05513 592 aa17.56■□□□□ 0.4
XRCC1-208ENST00000598422 SH3TC2Q8TF17 1288 aa17.56■□□□□ 0.4
XRCC1-208ENST00000598422 MYCP01106 439 aaPredicted RBP17.55■□□□□ 0.4
XRCC1-208ENST00000598422 HOXA7P31268 230 aaPredicted RBP17.55■□□□□ 0.4
XRCC1-208ENST00000598422 EVX2Q03828 476 aa17.55■□□□□ 0.4
XRCC1-208ENST00000598422 TMEM179Q6ZVK1 233 aa17.55■□□□□ 0.4
XRCC1-208ENST00000598422 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
XRCC1-208ENST00000598422 COA7Q96BR5 231 aa17.55■□□□□ 0.4
XRCC1-208ENST00000598422 DYNLL2Q96FJ2 89 aa17.55■□□□□ 0.4
XRCC1-208ENST00000598422 KIAA1683Q9H0B3 1180 aa17.55■□□□□ 0.4
XRCC1-208ENST00000598422 ARPP21Q9UBL0 812 aaPredicted RBP17.55■□□□□ 0.4
XRCC1-208ENST00000598422 CYP2D7A0A087X1C5 515 aa17.54■□□□□ 0.4
XRCC1-208ENST00000598422 GRK4P32298 578 aa17.54■□□□□ 0.4
XRCC1-208ENST00000598422 SEPT2Q15019 361 aa17.54■□□□□ 0.4
XRCC1-208ENST00000598422 C12orf60Q5U649 245 aa17.54■□□□□ 0.4
XRCC1-208ENST00000598422 GTF3C2Q8WUA4 911 aaPredicted RBP17.54■□□□□ 0.4
XRCC1-208ENST00000598422 OSBP2Q969R2 916 aa17.54■□□□□ 0.4
XRCC1-208ENST00000598422 STRBPQ96SI9 672 aaKnown RBP17.54■□□□□ 0.4
XRCC1-208ENST00000598422 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
XRCC1-208ENST00000598422 EMILIN3Q9NT22 766 aa17.54■□□□□ 0.4
XRCC1-208ENST00000598422 BIN2Q9UBW5 565 aaPredicted RBP17.54■□□□□ 0.4
XRCC1-208ENST00000598422 DDX60LQ5H9U9 1706 aaKnown RBP17.54■□□□□ 0.4
XRCC1-208ENST00000598422 NAV1Q8NEY1 1877 aa17.54■□□□□ 0.4
XRCC1-208ENST00000598422 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
XRCC1-208ENST00000598422 GPAA1O43292 621 aa17.53■□□□□ 0.4
XRCC1-208ENST00000598422 GNAT2P19087 354 aa17.53■□□□□ 0.4
XRCC1-208ENST00000598422 HERVK_113P62684 666 aa17.53■□□□□ 0.4
XRCC1-208ENST00000598422 ACER1Q8TDN7 264 aa17.53■□□□□ 0.4
XRCC1-208ENST00000598422 C12orf42Q96LP6 360 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms