RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 FAM205AQ6ZU69 1335 aa19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 MYSM1Q5VVJ2 828 aa19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 BRAPQ7Z569 592 aa19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 BICD2Q8TD16 824 aa19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 UTRNP46939 3433 aa19.8■□□□□ 0.76
SHKBP1-216ENST00000598201 GPR75-ASB3A0A0A6YYF3 556 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 NR1I2O75469 434 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 SLC3A2P08195 630 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 YBX3P16989 372 aaKnown RBP eCLIP19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 GPR162Q16538 588 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 CC2D2BQ6DHV5 1058 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 CRACR2BQ8N4Y2 399 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 DYNLL2Q96FJ2 89 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 NOL10Q9BSC4 688 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 FUCA2Q9BTY2 467 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 COA1Q9GZY4 146 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 RTEL1Q9NZ71 1219 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 CLIC4Q9Y696 253 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 PDE4BQ07343 736 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 CAMK4Q16566 473 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 SOGA3Q5TF21 947 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 DPP8Q6V1X1 898 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 MAPKAPK5Q8IW41 473 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 TBC1D22AQ8WUA7 517 aa19.79■□□□□ 0.76
SHKBP1-216ENST00000598201 CCDC196A0A1B0GTZ2 297 aa19.78■□□□□ 0.76
SHKBP1-216ENST00000598201 ZC3H12CQ9C0D7 883 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-216ENST00000598201 TROAPQ12815 778 aa19.77■□□□□ 0.76
SHKBP1-216ENST00000598201 DOK7Q18PE1 504 aa19.77■□□□□ 0.76
SHKBP1-216ENST00000598201 CCDC93Q567U6 631 aa19.77■□□□□ 0.76
SHKBP1-216ENST00000598201 FAM163AQ96GL9 167 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-216ENST00000598201 NUP62CLQ9H1M0 184 aa19.77■□□□□ 0.76
SHKBP1-216ENST00000598201 SAP30BPQ9UHR5 308 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-216ENST00000598201 PLCD1P51178 756 aa19.77■□□□□ 0.75
SHKBP1-216ENST00000598201 RHBDL3P58872 404 aa19.77■□□□□ 0.75
SHKBP1-216ENST00000598201 CATIPQ7Z7H3 387 aa19.77■□□□□ 0.75
SHKBP1-216ENST00000598201 CERS5Q8N5B7 392 aa19.77■□□□□ 0.75
SHKBP1-216ENST00000598201 LINC00301Q8NCQ3 95 aa19.77■□□□□ 0.75
SHKBP1-216ENST00000598201 GOLPH3LQ9H4A5 285 aa19.77■□□□□ 0.75
SHKBP1-216ENST00000598201 GAKO14976 1311 aa19.77■□□□□ 0.75
SHKBP1-216ENST00000598201 TRIM22Q8IYM9 498 aa19.76■□□□□ 0.75
SHKBP1-216ENST00000598201 RTKN2Q8IZC4 609 aa19.76■□□□□ 0.75
SHKBP1-216ENST00000598201 POLR3EQ9NVU0 708 aa19.76■□□□□ 0.75
SHKBP1-216ENST00000598201 ARFGEF1Q9Y6D6 1849 aa19.76■□□□□ 0.75
SHKBP1-216ENST00000598201 ROBO3Q96MS0 1386 aa19.76■□□□□ 0.75
SHKBP1-216ENST00000598201 TSPY2A6NKD2 308 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 ME1P48163 572 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 FUT2Q10981 343 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 TRIM29Q14134 588 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 GRIPAP1Q4V328 841 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 RCSD1Q6JBY9 416 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 CCAR1Q8IX12 1150 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 TEX11Q8IYF3 940 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 SLC44A5Q8NCS7 719 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 FBXW7Q969H0 707 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 MXD3Q9BW11 206 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 DDX19AQ9NUU7 478 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 PCDHA7Q9UN72 937 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 NAV1Q8NEY1 1877 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 PLEKHA8P1O95397 391 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 WASF1Q92558 559 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 PPP1R9BQ96SB3 815 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 CLSTN2Q9H4D0 955 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 KCNJ14Q9UNX9 436 aa19.75■□□□□ 0.75
SHKBP1-216ENST00000598201 DEXIO95424 95 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 U2AF2P26368 475 aaKnown RBP eCLIP19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 TFAP4Q01664 338 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 PPP2R5BQ15173 497 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 CDK5RAP2Q96SN8 1893 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 IL17RBQ9NRM6 502 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 DAGLAQ9Y4D2 1042 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 FLT1P17948 1338 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 F8W031 263 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 DDAH1O94760 285 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 YEATS4O95619 227 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 CCDC173Q0VFZ6 552 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 MAP3K11Q16584 847 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 ANO1Q5XXA6 986 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 ARHGAP27Q6ZUM4 889 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 CERS3Q8IU89 383 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 TNMDQ9H2S6 317 aa19.74■□□□□ 0.75
SHKBP1-216ENST00000598201 STK38Q15208 465 aa19.73■□□□□ 0.75
SHKBP1-216ENST00000598201 SLF2Q8IX21 1173 aa19.73■□□□□ 0.75
SHKBP1-216ENST00000598201 CKAP2LQ8IYA6 745 aa19.73■□□□□ 0.75
SHKBP1-216ENST00000598201 SHISA4Q96DD7 197 aa19.73■□□□□ 0.75
SHKBP1-216ENST00000598201 SNED1Q8TER0 1413 aa19.73■□□□□ 0.75
SHKBP1-216ENST00000598201 hCG_1642624A0A1W2PR95 340 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 GRIN3BO60391 1043 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 MMP1P03956 469 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 CALM1P0DP23 149 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 CALM2P0DP24 149 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 CALM3P0DP25 149 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 SNW1Q13573 536 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 GNL2Q13823 731 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 PKN1Q16512 942 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 AMOTL1Q8IY63 956 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 ANP32BQ92688 251 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 RNF26Q9BY78 433 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 MKNK2Q9HBH9 465 aa19.72■□□□□ 0.75
SHKBP1-216ENST00000598201 BTBD18B2RXH4 712 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms