RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 CLASRPQ8N2M8 674 aaKnown RBP15.22■□□□□ 0.03
LTBP4-221ENST00000598178 DEFB123Q8N688 67 aa15.22■□□□□ 0.03
LTBP4-221ENST00000598178 PAWRQ96IZ0 340 aaKnown RBP15.22■□□□□ 0.03
LTBP4-221ENST00000598178 FOCADQ5VW36 1801 aa15.22■□□□□ 0.03
LTBP4-221ENST00000598178 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
LTBP4-221ENST00000598178 HLA-DOAP06340 250 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 NEFLP07196 543 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 ELNP15502 786 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 MAP3K12Q12852 859 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
LTBP4-221ENST00000598178 GADL1Q6ZQY3 521 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 SH3RF3Q8TEJ3 882 aaPredicted RBP15.21■□□□□ 0.03
LTBP4-221ENST00000598178 EAF2Q96CJ1 260 aaPredicted RBP15.21■□□□□ 0.03
LTBP4-221ENST00000598178 KIF1BPQ96EK5 621 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 TLR7Q9NYK1 1049 aaKnown RBP15.21■□□□□ 0.03
LTBP4-221ENST00000598178 PI4KBQ9UBF8 816 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 COG6Q9Y2V7 657 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 PHIPQ8WWQ0 1821 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 ATAD5Q96QE3 1844 aa15.21■□□□□ 0.03
LTBP4-221ENST00000598178 TNPO2O14787 897 aaKnown RBP15.2■□□□□ 0.02
LTBP4-221ENST00000598178 IFIT2P09913 472 aaKnown RBP15.2■□□□□ 0.02
LTBP4-221ENST00000598178 PPP4CP60510 307 aa15.2■□□□□ 0.02
LTBP4-221ENST00000598178 CRACR2BQ8N4Y2 399 aaPredicted RBP15.2■□□□□ 0.02
LTBP4-221ENST00000598178 AS3MTQ9HBK9 375 aa15.2■□□□□ 0.02
LTBP4-221ENST00000598178 MTMR10Q9NXD2 777 aa15.2■□□□□ 0.02
LTBP4-221ENST00000598178 PNMA3Q9UL41 463 aa15.2■□□□□ 0.02
LTBP4-221ENST00000598178 AFG3L2Q9Y4W6 797 aa15.2■□□□□ 0.02
LTBP4-221ENST00000598178 FLT1P17948 1338 aa15.19■□□□□ 0.02
LTBP4-221ENST00000598178 CDK5RAP2Q96SN8 1893 aa15.19■□□□□ 0.02
LTBP4-221ENST00000598178 TRIM75PA6NK02 468 aa15.19■□□□□ 0.02
LTBP4-221ENST00000598178 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
LTBP4-221ENST00000598178 CYP7A1P22680 504 aa15.19■□□□□ 0.02
LTBP4-221ENST00000598178 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.02
LTBP4-221ENST00000598178 TDHQ8IZJ6 230 aa15.19■□□□□ 0.02
LTBP4-221ENST00000598178 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
LTBP4-221ENST00000598178 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
LTBP4-221ENST00000598178 PIH1D3Q9NQM4 214 aaKnown RBP15.19■□□□□ 0.02
LTBP4-221ENST00000598178 SUPT16HQ9Y5B9 1047 aaKnown RBP15.19■□□□□ 0.02
LTBP4-221ENST00000598178 APBB1O00213 710 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 CAP2P40123 477 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 PDE3AQ14432 1141 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 MAPKAPK5Q8IW41 473 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 TGFBRAP1Q8WUH2 860 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 COA7Q96BR5 231 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 NBPF3Q9H094 633 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 IL1RAPL2Q9NP60 686 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 ZBTB40Q9NUA8 1239 aa15.18■□□□□ 0.02
LTBP4-221ENST00000598178 MYO5AQ9Y4I1 1855 aaKnown RBP15.18■□□□□ 0.02
LTBP4-221ENST00000598178 LOC285556D6RIA3 1793 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 FAM196BA6NMK8 535 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 USP17L5A8MUK1 530 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 ASNSP08243 561 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 USP5P45974 858 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 FAM110CQ1W6H9 321 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 MAGEB6Q8N7X4 407 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 PROCA1Q8NCQ7 364 aaPredicted RBP15.17■□□□□ 0.02
LTBP4-221ENST00000598178 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.17■□□□□ 0.02
LTBP4-221ENST00000598178 GINM1Q9NU53 330 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 AGTPBP1Q9UPW5 1226 aa15.17■□□□□ 0.02
LTBP4-221ENST00000598178 HMGCRP04035 888 aa15.16■□□□□ 0.02
LTBP4-221ENST00000598178 Q7L0L9 218 aa15.16■□□□□ 0.02
LTBP4-221ENST00000598178 ADGRA1Q86SQ6 560 aa15.16■□□□□ 0.02
LTBP4-221ENST00000598178 FOXP4Q8IVH2 680 aaPredicted RBP15.16■□□□□ 0.02
LTBP4-221ENST00000598178 C7orf61Q8IZ16 206 aa15.16■□□□□ 0.02
LTBP4-221ENST00000598178 DIS3LQ8TF46 1054 aaKnown RBP15.16■□□□□ 0.02
LTBP4-221ENST00000598178 COL25A1Q9BXS0 654 aaPredicted RBP15.16■□□□□ 0.02
LTBP4-221ENST00000598178 DDX60LQ5H9U9 1706 aaKnown RBP15.16■□□□□ 0.02
LTBP4-221ENST00000598178 RPTORQ8N122 1335 aa15.16■□□□□ 0.02
LTBP4-221ENST00000598178 MIGA1Q8NAN2 632 aa15.15■□□□□ 0.02
LTBP4-221ENST00000598178 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
LTBP4-221ENST00000598178 SIPA1L1O43166 1804 aa15.15■□□□□ 0.02
LTBP4-221ENST00000598178 MYH1P12882 1939 aa15.14■□□□□ 0.01
LTBP4-221ENST00000598178 MAGEA10P43363 369 aaPredicted RBP15.14■□□□□ 0.01
LTBP4-221ENST00000598178 SPP2Q13103 211 aa15.14■□□□□ 0.01
LTBP4-221ENST00000598178 FAM109BQ6ICB4 259 aaPredicted RBP15.14■□□□□ 0.01
LTBP4-221ENST00000598178 TTC6Q86TZ1 520 aa15.14■□□□□ 0.01
LTBP4-221ENST00000598178 DNAJC2Q99543 621 aaKnown RBP15.14■□□□□ 0.01
LTBP4-221ENST00000598178 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
LTBP4-221ENST00000598178 HMX1Q9NP08 348 aaPredicted RBP15.14■□□□□ 0.01
LTBP4-221ENST00000598178 TMOD4Q9NZQ9 345 aa15.14■□□□□ 0.01
LTBP4-221ENST00000598178 SAP30BPQ9UHR5 308 aaKnown RBP15.14■□□□□ 0.01
LTBP4-221ENST00000598178 OGDHLQ9ULD0 1010 aa15.14■□□□□ 0.01
LTBP4-221ENST00000598178 PALD1Q9ULE6 856 aa15.14■□□□□ 0.01
LTBP4-221ENST00000598178 NAV1Q8NEY1 1877 aa15.14■□□□□ 0.01
LTBP4-221ENST00000598178 SLURP2P0DP57 97 aa15.13■□□□□ 0.01
LTBP4-221ENST00000598178 GCLCP48506 637 aaPredicted RBP15.13■□□□□ 0.01
LTBP4-221ENST00000598178 HMGCS2P54868 508 aa15.13■□□□□ 0.01
LTBP4-221ENST00000598178 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
LTBP4-221ENST00000598178 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
LTBP4-221ENST00000598178 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.01
LTBP4-221ENST00000598178 C11orf49Q9H6J7 331 aa15.13■□□□□ 0.01
LTBP4-221ENST00000598178 ANTXR1Q9H6X2 564 aa15.13■□□□□ 0.01
LTBP4-221ENST00000598178 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.13■□□□□ 0.01
LTBP4-221ENST00000598178 GJD2Q9UKL4 321 aa15.13■□□□□ 0.01
LTBP4-221ENST00000598178 ZMYND8Q9ULU4 1186 aaPredicted RBP15.13■□□□□ 0.01
LTBP4-221ENST00000598178 NDUFB9Q9Y6M9 179 aa15.13■□□□□ 0.01
LTBP4-221ENST00000598178 PLXNB2O15031 1838 aa15.13■□□□□ 0.01
LTBP4-221ENST00000598178 MAGEB6P1A0A0J9YX57 407 aa15.12■□□□□ 0.01
LTBP4-221ENST00000598178 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms