RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 GRM1Q13255 1194 aa26.23■■□□□ 1.79
CHMP2A-204ENST00000597848 AKNAD1Q5T1N1 836 aa26.23■■□□□ 1.79
CHMP2A-204ENST00000597848 TBC1D10CQ8IV04 446 aa26.23■■□□□ 1.79
CHMP2A-204ENST00000597848 CCDC17Q96LX7 622 aa26.23■■□□□ 1.79
CHMP2A-204ENST00000597848 RNF41Q9H4P4 317 aaPredicted RBP26.23■■□□□ 1.79
CHMP2A-204ENST00000597848 RASSF10A6NK89 507 aa26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 EIF5BO60841 1220 aaKnown RBP26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 GH2P01242 217 aa26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 ASNSP08243 561 aa26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 CYP21A2P08686 494 aa26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 RASA1P20936 1047 aa26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 JAG1P78504 1218 aa26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 RRP12Q5JTH9 1297 aaKnown RBP26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 NBPF3Q9H094 633 aa26.22■■□□□ 1.79
CHMP2A-204ENST00000597848 AKR1B1P15121 316 aa26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 SHROOM1Q2M3G4 852 aaPredicted RBP26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 STAG1Q8WVM7 1258 aa26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 CCDC102AQ96A19 550 aa26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 GINM1Q9NU53 330 aa26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 ZBTB21Q9ULJ3 1066 aa26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 TACC3Q9Y6A5 838 aa26.21■■□□□ 1.79
CHMP2A-204ENST00000597848 LAMB1P07942 1786 aa26.2■■□□□ 1.79
CHMP2A-204ENST00000597848 RANBP6O60518 1105 aaKnown RBP26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 PTPRAP18433 802 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 RAB3GAP1Q15042 981 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 NECTIN1Q15223 517 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 C8orf34Q49A92 452 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 RNF20Q5VTR2 975 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 CREB3L3Q68CJ9 461 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 CYP4F22Q6NT55 531 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 ERO1BQ86YB8 467 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 CNKSR2Q8WXI2 1034 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 OPTNQ96CV9 577 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 OTUD5Q96G74 571 aa26.2■■□□□ 1.78
CHMP2A-204ENST00000597848 SLC27A2O14975 620 aa26.19■■□□□ 1.78
CHMP2A-204ENST00000597848 ORC4O43929 436 aa26.19■■□□□ 1.78
CHMP2A-204ENST00000597848 PCP11498 1178 aaKnown RBP26.19■■□□□ 1.78
CHMP2A-204ENST00000597848 MKRN3Q13064 507 aaKnown RBP26.19■■□□□ 1.78
CHMP2A-204ENST00000597848 FAM47AQ5JRC9 791 aa26.19■■□□□ 1.78
CHMP2A-204ENST00000597848 CCDC84Q86UT8 332 aaPredicted RBP26.19■■□□□ 1.78
CHMP2A-204ENST00000597848 RASAL3Q86YV0 1011 aa26.19■■□□□ 1.78
CHMP2A-204ENST00000597848 ZHX2Q9Y6X8 837 aa26.19■■□□□ 1.78
CHMP2A-204ENST00000597848 SPDYE5A6NIY4 337 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 USP17L5A8MUK1 530 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 FGRP09769 529 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 TSPY3P0CV98 308 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 TSPY8P0CW00 308 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 ECE1P42892 770 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 TFAP4Q01664 338 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 PPATQ06203 517 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 TMEM179Q6ZVK1 233 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 WNK4Q96J92 1243 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 CAPNS2Q96L46 248 aa26.18■■□□□ 1.78
CHMP2A-204ENST00000597848 TSPY2A6NKD2 308 aa26.17■■□□□ 1.78
CHMP2A-204ENST00000597848 SEPT2Q15019 361 aa26.17■■□□□ 1.78
CHMP2A-204ENST00000597848 SPRYD7Q5W111 196 aa26.17■■□□□ 1.78
CHMP2A-204ENST00000597848 USP26Q9BXU7 913 aa26.17■■□□□ 1.78
CHMP2A-204ENST00000597848 NEDD4P46934 1319 aa26.16■■□□□ 1.78
CHMP2A-204ENST00000597848 SLC10A3P09131 477 aa26.16■■□□□ 1.78
CHMP2A-204ENST00000597848 TRDNQ13061 729 aa26.16■■□□□ 1.78
CHMP2A-204ENST00000597848 KRT23Q9C075 422 aa26.16■■□□□ 1.78
CHMP2A-204ENST00000597848 CNNM2Q9H8M5 875 aa26.16■■□□□ 1.78
CHMP2A-204ENST00000597848 TAF6LQ9Y6J9 622 aa26.16■■□□□ 1.78
CHMP2A-204ENST00000597848 OTOFQ9HC10 1997 aa26.16■■□□□ 1.78
CHMP2A-204ENST00000597848 E7EWF7 191 aa26.15■■□□□ 1.78
CHMP2A-204ENST00000597848 EPB41L2O43491 1005 aaKnown RBP26.15■■□□□ 1.78
CHMP2A-204ENST00000597848 SEC24BO95487 1268 aa26.15■■□□□ 1.78
CHMP2A-204ENST00000597848 ZKSCAN1P17029 563 aaPredicted RBP26.15■■□□□ 1.78
CHMP2A-204ENST00000597848 GUCY1A2P33402 732 aa26.15■■□□□ 1.78
CHMP2A-204ENST00000597848 PPIL2Q13356 520 aa26.15■■□□□ 1.78
CHMP2A-204ENST00000597848 ESR2Q92731 530 aa26.15■■□□□ 1.78
CHMP2A-204ENST00000597848 AS3MTQ9HBK9 375 aa26.15■■□□□ 1.78
CHMP2A-204ENST00000597848 FAM155AB1AL88 458 aaPredicted RBP26.14■■□□□ 1.78
CHMP2A-204ENST00000597848 B4E1Z4 1266 aa26.14■■□□□ 1.78
CHMP2A-204ENST00000597848 MCCP23508 829 aa26.14■■□□□ 1.78
CHMP2A-204ENST00000597848 HSPA4P34932 840 aa26.14■■□□□ 1.78
CHMP2A-204ENST00000597848 GJA5P36382 358 aa26.14■■□□□ 1.78
CHMP2A-204ENST00000597848 VEGFBP49765 207 aa26.14■■□□□ 1.78
CHMP2A-204ENST00000597848 NEDD1Q8NHV4 660 aa26.14■■□□□ 1.78
CHMP2A-204ENST00000597848 IRF6O14896 467 aa26.13■■□□□ 1.77
CHMP2A-204ENST00000597848 KDM4AO75164 1064 aa26.13■■□□□ 1.77
CHMP2A-204ENST00000597848 ZBTB48P10074 688 aaPredicted RBP26.13■■□□□ 1.77
CHMP2A-204ENST00000597848 SPP2Q13103 211 aa26.13■■□□□ 1.77
CHMP2A-204ENST00000597848 RALYLQ86SE5 291 aaKnown RBP26.13■■□□□ 1.77
CHMP2A-204ENST00000597848 TBC1D2Q9BYX2 928 aa26.13■■□□□ 1.77
CHMP2A-204ENST00000597848 KANSL2Q9H9L4 492 aa26.13■■□□□ 1.77
CHMP2A-204ENST00000597848 WDR33Q9C0J8 1336 aaKnown RBP26.13■■□□□ 1.77
CHMP2A-204ENST00000597848 TRIM75PA6NK02 468 aa26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 ATP2B2Q01814 1243 aa26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 STOX1Q6ZVD7 989 aa26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 CLEC10AQ8IUN9 316 aa26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 ZNF280CQ8ND82 737 aa26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 NCOA7Q8NI08 942 aa26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 AFG3L2Q9Y4W6 797 aa26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 DOCK1Q14185 1865 aa26.12■■□□□ 1.77
CHMP2A-204ENST00000597848 AOC2O75106 756 aa26.11■■□□□ 1.77
CHMP2A-204ENST00000597848 ICA1Q05084 483 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms