RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 SUGT1Q9Y2Z0 365 aa13.8□□□□□ -0.2
PDE4C-210ENST00000597297 MYH15Q9Y2K3 1946 aa13.8□□□□□ -0.2
PDE4C-210ENST00000597297 FOCADQ5VW36 1801 aa13.8□□□□□ -0.2
PDE4C-210ENST00000597297 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 BAG3O95817 575 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 LIFRP42702 1097 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 PPP4CP60510 307 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 SBK1Q52WX2 424 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 TMEM67Q5HYA8 995 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 RRP12Q5JTH9 1297 aaKnown RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 SGMS1Q86VZ5 419 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 FAM184AQ8NB25 1140 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 LY9Q9HBG7 655 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 ARPP21Q9UBL0 812 aaPredicted RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 KIF3AQ9Y496 699 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 ECM29Q5VYK3 1845 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 CEP350Q5VT06 3117 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 DDX60LQ5H9U9 1706 aaKnown RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 CYP2D7A0A087X1C5 515 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 USP17L12C9JPN9 530 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 USP17L21D6R901 530 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 IFIT3O14879 490 aaKnown RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 PRPF40AO75400 957 aaKnown RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 HDLBPQ00341 1268 aaKnown RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 SULF1Q8IWU6 871 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 SLF2Q8IX21 1173 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 DNAJC5GQ8N7S2 189 aa13.79□□□□□ -0.2
PDE4C-210ENST00000597297 SH3RF3Q8TEJ3 882 aaPredicted RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
PDE4C-210ENST00000597297 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
PDE4C-210ENST00000597297 FGRP09769 529 aa13.78□□□□□ -0.2
PDE4C-210ENST00000597297 DEKP35659 375 aaKnown RBP13.78□□□□□ -0.2
PDE4C-210ENST00000597297 SART3Q15020 963 aaKnown RBP13.78□□□□□ -0.2
PDE4C-210ENST00000597297 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
PDE4C-210ENST00000597297 FOXD4L6Q3SYB3 417 aaPredicted RBP13.78□□□□□ -0.2
PDE4C-210ENST00000597297 APOA5Q6Q788 366 aa13.78□□□□□ -0.2
PDE4C-210ENST00000597297 FOXD4L3Q6VB84 417 aaPredicted RBP13.78□□□□□ -0.2
PDE4C-210ENST00000597297 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
PDE4C-210ENST00000597297 ESR2Q92731 530 aa13.78□□□□□ -0.2
PDE4C-210ENST00000597297 ZNF408Q9H9D4 720 aa13.78□□□□□ -0.2
PDE4C-210ENST00000597297 SENP2Q9HC62 589 aa13.78□□□□□ -0.2
PDE4C-210ENST00000597297 MYH1P12882 1939 aa13.77□□□□□ -0.2
PDE4C-210ENST00000597297 GAKO14976 1311 aa13.77□□□□□ -0.2
PDE4C-210ENST00000597297 PITPNM2Q9BZ72 1349 aa13.77□□□□□ -0.2
PDE4C-210ENST00000597297 GPR75-ASB3A0A0A6YYF3 556 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 CELF2O95319 508 aaKnown RBP13.77□□□□□ -0.21
PDE4C-210ENST00000597297 BTDP43251 543 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 USP5P45974 858 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDE4C-210ENST00000597297 APOBEC3HQ6NTF7 200 aaKnown RBP13.77□□□□□ -0.21
PDE4C-210ENST00000597297 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 TEKT1Q969V4 418 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 FAM163AQ96GL9 167 aaPredicted RBP13.77□□□□□ -0.21
PDE4C-210ENST00000597297 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 ZNF70Q9UC06 446 aaPredicted RBP13.77□□□□□ -0.21
PDE4C-210ENST00000597297 MKRN1Q9UHC7 482 aaKnown RBP13.77□□□□□ -0.21
PDE4C-210ENST00000597297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDE4C-210ENST00000597297 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.21
PDE4C-210ENST00000597297 TRPM7Q96QT4 1865 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 NID2Q14112 1375 aa13.77□□□□□ -0.21
PDE4C-210ENST00000597297 ERICH2A1L162 156 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 H3BQV1 296 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 ZBTB43O43298 467 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 ORC4O43929 436 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 SLC3A2P08195 630 aaKnown RBP13.76□□□□□ -0.21
PDE4C-210ENST00000597297 CYP2D6P10635 497 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 WTAPQ15007 396 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 IFFO2Q5TF58 517 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 TMEM87AQ8NBN3 555 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 CDCA5Q96FF9 252 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 ZDHHC15Q96MV8 337 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 MCM9Q9NXL9 1143 aa13.76□□□□□ -0.21
PDE4C-210ENST00000597297 CPLX1O14810 134 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 MYO1BO43795 1136 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 PLCG2P16885 1265 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 SPDYE2Q495Y8 402 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 ZKSCAN3Q9BRR0 538 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 UBAC1Q9BSL1 405 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
PDE4C-210ENST00000597297 VEZTQ9HBM0 779 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 CNPY2Q9Y2B0 182 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 SLC12A7Q9Y666 1083 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 ROBO3Q96MS0 1386 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 FDPSP14324 419 aaKnown RBP13.75□□□□□ -0.21
PDE4C-210ENST00000597297 CACNB3P54284 484 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 EVX2Q03828 476 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 SEC23AQ15436 765 aa13.75□□□□□ -0.21
PDE4C-210ENST00000597297 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms