RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 MINDY4BA8MYZ0 360 aa16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 HSPA8P11142 646 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 GNAT2P19087 354 aa16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 TDO2P48775 406 aa16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 TATDN1Q6P1N9 297 aa16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 CWC27Q6UX04 472 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 IFNL1Q8IU54 200 aa16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 IFNL3Q8IZI9 196 aa16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
SHKBP1-207ENST00000595631 TESPA1A2RU30 521 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 GTF2A2P52657 109 aa16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 ARPP21Q9UBL0 812 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 KCNH4Q9UQ05 1017 aa16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 AFG3L2Q9Y4W6 797 aa16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 MYH4Q9Y623 1939 aa16.5■□□□□ 0.23
SHKBP1-207ENST00000595631 CCDC171Q6TFL3 1326 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 TRIM75PA6NK02 468 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 GH2P01242 217 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 LBX1P52954 281 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 SNAPC2Q13487 334 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 DGKZQ13574 1117 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 SBK1Q52WX2 424 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 AMOTL1Q8IY63 956 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 IL25Q9H293 177 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 R3HDMLQ9H3Y0 253 aa16.49■□□□□ 0.23
SHKBP1-207ENST00000595631 ZSWIM8A7E2V4 1837 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 TBC1D8O95759 1140 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 ASNSP08243 561 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 CETPP11597 493 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 CDK8P49336 464 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 MOGSQ13724 837 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 ABCB5Q2M3G0 1257 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 C16orf86Q6ZW13 317 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 NAPBQ9H115 298 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
SHKBP1-207ENST00000595631 USP17L5A8MUK1 530 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 BTBD19C9JJ37 291 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 AKR1B1P15121 316 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 GUCY1A2P33402 732 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 INHBEP58166 350 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 SPP2Q13103 211 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 NACAP1Q9BZK3 213 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 SAGE1Q9NXZ1 904 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 SWAP70Q9UH65 585 aa16.47■□□□□ 0.23
SHKBP1-207ENST00000595631 A0A0G2JLL6 359 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 HIP1O00291 1037 aa16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 MPHOSPH10O00566 681 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 CXCL11O14625 94 aa16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 CA12O43570 354 aa16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 HSPD1P10809 573 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 ERICH6BQ5W0A0 696 aa16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 GADL1Q6ZQY3 521 aa16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 PRRT2Q7Z6L0 340 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 ZNF280CQ8ND82 737 aa16.46■□□□□ 0.23
SHKBP1-207ENST00000595631 CHMLP26374 656 aa16.45■□□□□ 0.22
SHKBP1-207ENST00000595631 CTDSPL2Q05D32 466 aa16.45■□□□□ 0.22
SHKBP1-207ENST00000595631 PPARAQ07869 468 aa16.45■□□□□ 0.22
SHKBP1-207ENST00000595631 CRHR2Q13324 411 aa16.45■□□□□ 0.22
SHKBP1-207ENST00000595631 MTMR2Q13614 643 aa16.45■□□□□ 0.22
SHKBP1-207ENST00000595631 SEPT2Q15019 361 aa16.45■□□□□ 0.22
SHKBP1-207ENST00000595631 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
SHKBP1-207ENST00000595631 AS3MTQ9HBK9 375 aa16.45■□□□□ 0.22
SHKBP1-207ENST00000595631 PRDM1O75626 825 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 FGAP02671 866 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 HMGCS2P54868 508 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 CABP5Q9NP86 173 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 INCENPQ9NQS7 918 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 GINM1Q9NU53 330 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 TACC3Q9Y6A5 838 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 PARP14Q460N5 1801 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 MGAMO43451 1857 aa16.44■□□□□ 0.22
SHKBP1-207ENST00000595631 ALDH1A1P00352 501 aa16.43■□□□□ 0.22
SHKBP1-207ENST00000595631 RASA1P20936 1047 aa16.43■□□□□ 0.22
SHKBP1-207ENST00000595631 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-207ENST00000595631 ALX1Q15699 326 aa16.43■□□□□ 0.22
SHKBP1-207ENST00000595631 TREML2Q5T2D2 321 aa16.43■□□□□ 0.22
SHKBP1-207ENST00000595631 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
SHKBP1-207ENST00000595631 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
SHKBP1-207ENST00000595631 PDHXO00330 501 aa16.42■□□□□ 0.22
SHKBP1-207ENST00000595631 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-207ENST00000595631 BACE1P56817 501 aa16.42■□□□□ 0.22
SHKBP1-207ENST00000595631 HAND2P61296 217 aa16.42■□□□□ 0.22
SHKBP1-207ENST00000595631 ZYXQ15942 572 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-207ENST00000595631 ANKRD23Q86SG2 305 aa16.42■□□□□ 0.22
SHKBP1-207ENST00000595631 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
SHKBP1-207ENST00000595631 MKNK2Q9HBH9 465 aa16.42■□□□□ 0.22
SHKBP1-207ENST00000595631 USP17L10C9JJH3 530 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms