RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RABL6Q3YEC7 729 aaPredicted RBP15.75■□□□□ 0.11
SCAF1-202ENST00000595242 TMEM57Q8N5G2 664 aa15.75■□□□□ 0.11
SCAF1-202ENST00000595242 API5Q9BZZ5 524 aaKnown RBP15.75■□□□□ 0.11
SCAF1-202ENST00000595242 CHMP4BQ9H444 224 aaKnown RBP15.75■□□□□ 0.11
SCAF1-202ENST00000595242 PCDHB15Q9Y5E8 787 aa15.75■□□□□ 0.11
SCAF1-202ENST00000595242 TMEM265A0A087WTH1 108 aa15.74■□□□□ 0.11
SCAF1-202ENST00000595242 FAM196BA6NMK8 535 aa15.74■□□□□ 0.11
SCAF1-202ENST00000595242 GPRC5AQ8NFJ5 357 aa15.74■□□□□ 0.11
SCAF1-202ENST00000595242 DDX4Q9NQI0 724 aaKnown RBP15.74■□□□□ 0.11
SCAF1-202ENST00000595242 ZBTB40Q9NUA8 1239 aa15.74■□□□□ 0.11
SCAF1-202ENST00000595242 TBC1D12O60347 775 aa15.73■□□□□ 0.11
SCAF1-202ENST00000595242 RGS2P41220 211 aa15.73■□□□□ 0.11
SCAF1-202ENST00000595242 HDAC1Q13547 482 aaPredicted RBP15.73■□□□□ 0.11
SCAF1-202ENST00000595242 ANKRD44Q8N8A2 993 aa15.73■□□□□ 0.11
SCAF1-202ENST00000595242 LPIN2Q92539 896 aa15.73■□□□□ 0.11
SCAF1-202ENST00000595242 USP6NLQ92738 828 aa15.73■□□□□ 0.11
SCAF1-202ENST00000595242 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
SCAF1-202ENST00000595242 OSBPL5Q9H0X9 879 aaPredicted RBP15.73■□□□□ 0.11
SCAF1-202ENST00000595242 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.73■□□□□ 0.114e-10■■■■■ 51
SCAF1-202ENST00000595242 TXNRD2Q9NNW7 524 aa15.73■□□□□ 0.11
SCAF1-202ENST00000595242 UTYO14607 1347 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 GAKO14976 1311 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 PTPRCP08575 1304 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 SALL1Q9NSC2 1324 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 BDP1A6H8Y1 2624 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 MAPK4P31152 587 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 RTP1P59025 263 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 IRX3P78415 501 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-202ENST00000595242 SH3D19Q5HYK7 790 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 ITPRIPQ8IWB1 547 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 CCAR1Q8IX12 1150 aaKnown RBP15.72■□□□□ 0.11
SCAF1-202ENST00000595242 USP38Q8NB14 1042 aa15.72■□□□□ 0.11
SCAF1-202ENST00000595242 P2RX7Q99572 595 aaKnown RBP15.72■□□□□ 0.11
SCAF1-202ENST00000595242 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
SCAF1-202ENST00000595242 TCF20Q9UGU0 1960 aaKnown RBP15.72■□□□□ 0.11
SCAF1-202ENST00000595242 BADQ92934 168 aa15.71■□□□□ 0.11
SCAF1-202ENST00000595242 APBA2Q99767 749 aa15.71■□□□□ 0.11
SCAF1-202ENST00000595242 BACH2Q9BYV9 841 aa15.71■□□□□ 0.11
SCAF1-202ENST00000595242 GNL3LQ9NVN8 582 aaKnown RBP15.71■□□□□ 0.11
SCAF1-202ENST00000595242 ATP11BQ9Y2G3 1177 aa15.71■□□□□ 0.11
SCAF1-202ENST00000595242 USP17L5A8MUK1 530 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 DNM1LO00429 736 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 HOXA7P31268 230 aaPredicted RBP15.7■□□□□ 0.1
SCAF1-202ENST00000595242 HERVK_113P62684 666 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 Q3C1V9 767 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 MORN1Q5T089 497 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 GPR142Q7Z601 462 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 LPAR1Q92633 364 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 PORCNQ9H237 461 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 AS3MTQ9HBK9 375 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 PRDM5Q9NQX1 630 aaPredicted RBP15.7■□□□□ 0.1
SCAF1-202ENST00000595242 RBPJLQ9UBG7 517 aa15.7■□□□□ 0.1
SCAF1-202ENST00000595242 DDX20Q9UHI6 824 aaKnown RBP15.7■□□□□ 0.1
SCAF1-202ENST00000595242 CDK5RAP2Q96SN8 1893 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 PDE4AP27815 886 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 CAP2P40123 477 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 BTDP43251 543 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 MAP3K12Q12852 859 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 MTMR2Q13614 643 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 GRIN2CQ14957 1233 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 PLEKHH3Q7Z736 793 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
SCAF1-202ENST00000595242 DENND2AQ9ULE3 1009 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 PLXNA1Q9UIW2 1896 aa15.69■□□□□ 0.1
SCAF1-202ENST00000595242 SMCHD1A6NHR9 2005 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 EYA2O00167 538 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 MSCO60682 206 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 CNGA1P29973 690 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
SCAF1-202ENST00000595242 ERVK-9P63128 1117 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 ERVK-24P63145 666 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 RRP1BQ14684 758 aaKnown RBP15.68■□□□□ 0.1
SCAF1-202ENST00000595242 MFSD14CQ5VZR4 134 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 SLC39A5Q6ZMH5 540 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 SLF2Q8IX21 1173 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 ZGPATQ8N5A5 531 aaKnown RBP15.68■□□□□ 0.1
SCAF1-202ENST00000595242 FAM163AQ96GL9 167 aaPredicted RBP15.68■□□□□ 0.1
SCAF1-202ENST00000595242 TMOD4Q9NZQ9 345 aa15.68■□□□□ 0.1
SCAF1-202ENST00000595242 SIPA1L1O43166 1804 aa15.67■□□□□ 0.1
SCAF1-202ENST00000595242 SEMA3EO15041 775 aa15.67■□□□□ 0.1
SCAF1-202ENST00000595242 BACE1P56817 501 aa15.67■□□□□ 0.1
SCAF1-202ENST00000595242 MAP2K5Q13163 448 aa15.67■□□□□ 0.1
SCAF1-202ENST00000595242 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
SCAF1-202ENST00000595242 EDC3Q96F86 508 aaKnown RBP15.67■□□□□ 0.1
SCAF1-202ENST00000595242 FLRT1Q9NZU1 646 aa15.67■□□□□ 0.1
SCAF1-202ENST00000595242 PHKA1P46020 1223 aa15.66■□□□□ 0.1
SCAF1-202ENST00000595242 ATP2B3Q16720 1220 aa15.66■□□□□ 0.1
SCAF1-202ENST00000595242 GJC2Q5T442 439 aaPredicted RBP15.66■□□□□ 0.1
SCAF1-202ENST00000595242 ATXN2LQ8WWM7 1075 aaKnown RBP15.66■□□□□ 0.1
SCAF1-202ENST00000595242 PAGR1Q9BTK6 254 aa15.66■□□□□ 0.1
SCAF1-202ENST00000595242 WDR18Q9BV38 432 aa15.66■□□□□ 0.1
SCAF1-202ENST00000595242 CWC22Q9HCG8 908 aaKnown RBP15.66■□□□□ 0.1
SCAF1-202ENST00000595242 ABCF2Q9UG63 623 aa15.66■□□□□ 0.1
SCAF1-202ENST00000595242 ZNFX1Q9P2E3 1918 aaKnown RBP15.65■□□□□ 0.1
SCAF1-202ENST00000595242 GPR75-ASB3A0A0A6YYF3 556 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
SCAF1-202ENST00000595242 RHBDL3P58872 404 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 TRIM60Q495X7 471 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 ATG9AQ7Z3C6 839 aa15.65■□□□□ 0.1
SCAF1-202ENST00000595242 SH3RF1Q7Z6J0 888 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms