RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 CDC45O75419 566 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 APPP05067 770 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 ASNSP08243 561 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 TDO2P48775 406 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 INHBEP58166 350 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 PPARAQ07869 468 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 OPTNQ96CV9 577 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 ZIC5Q96T25 663 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 WDR18Q9BV38 432 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 ELP3Q9H9T3 547 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 TACC3Q9Y6A5 838 aa13.37□□□□□ -0.27
XRCC1-204ENST00000594511 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
XRCC1-204ENST00000594511 CEP350Q5VT06 3117 aa13.36□□□□□ -0.27
XRCC1-204ENST00000594511 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
XRCC1-204ENST00000594511 RASA1P20936 1047 aa13.36□□□□□ -0.27
XRCC1-204ENST00000594511 NT5C2P49902 561 aa13.36□□□□□ -0.27
XRCC1-204ENST00000594511 PTH1RQ03431 593 aa13.36□□□□□ -0.27
XRCC1-204ENST00000594511 CERKLQ49MI3 558 aaPredicted RBP13.36□□□□□ -0.27
XRCC1-204ENST00000594511 SLC44A5Q8NCS7 719 aa13.36□□□□□ -0.27
XRCC1-204ENST00000594511 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
XRCC1-204ENST00000594511 NBPF3Q9H094 633 aa13.36□□□□□ -0.27
XRCC1-204ENST00000594511 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
XRCC1-204ENST00000594511 IGKV6D-41A0A0C4DH26 115 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 MANSC4A6NHS7 340 aaPredicted RBP13.35□□□□□ -0.27
XRCC1-204ENST00000594511 USP17L5A8MUK1 530 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 MINDY4BA8MYZ0 360 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 IRF6O14896 467 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 ORC4O43929 436 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 AOC2O75106 756 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 NOVP48745 357 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
XRCC1-204ENST00000594511 MOGSQ13724 837 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 SLC4A8Q2Y0W8 1093 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
XRCC1-204ENST00000594511 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
XRCC1-204ENST00000594511 ZNF287Q9HBT7 754 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 PICK1Q9NRD5 415 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 ZBTB21Q9ULJ3 1066 aa13.35□□□□□ -0.27
XRCC1-204ENST00000594511 LAMA4Q16363 1823 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 EPB41L2O43491 1005 aaKnown RBP13.34□□□□□ -0.27
XRCC1-204ENST00000594511 GTF2A2P52657 109 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 ABCB5Q2M3G0 1257 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 SHROOM1Q2M3G4 852 aaPredicted RBP13.34□□□□□ -0.27
XRCC1-204ENST00000594511 TMEM179Q6ZVK1 233 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 STAG1Q8WVM7 1258 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 CFHR5Q9BXR6 569 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 TRIM34Q9BYJ4 488 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 WBP1LQ9NX94 342 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 ZHX2Q9Y6X8 837 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 PTPRFP10586 1907 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 MYH8P13535 1937 aa13.34□□□□□ -0.27
XRCC1-204ENST00000594511 A0A0G2JLL6 359 aaPredicted RBP13.33□□□□□ -0.28
XRCC1-204ENST00000594511 GH2P01242 217 aa13.33□□□□□ -0.28
XRCC1-204ENST00000594511 SLC3A2P08195 630 aaKnown RBP13.33□□□□□ -0.28
XRCC1-204ENST00000594511 PDE4BQ07343 736 aa13.33□□□□□ -0.28
XRCC1-204ENST00000594511 NECTIN1Q15223 517 aa13.33□□□□□ -0.28
XRCC1-204ENST00000594511 PRRT2Q7Z6L0 340 aaPredicted RBP13.33□□□□□ -0.28
XRCC1-204ENST00000594511 ZNF280CQ8ND82 737 aa13.33□□□□□ -0.28
XRCC1-204ENST00000594511 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
XRCC1-204ENST00000594511 PTPN18Q99952 460 aa13.33□□□□□ -0.28
XRCC1-204ENST00000594511 ZCCHC17Q9NP64 241 aaKnown RBP13.33□□□□□ -0.28
XRCC1-204ENST00000594511 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
XRCC1-204ENST00000594511 C19orf81C9J6K1 198 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 ZNF213O14771 459 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 GDF11O95390 407 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 CETPP11597 493 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 AKR1B1P15121 316 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 MAP2K1Q02750 393 aaPredicted RBP13.32□□□□□ -0.28
XRCC1-204ENST00000594511 CTDSPL2Q05D32 466 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 SNAPC2Q13487 334 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 AKNAD1Q5T1N1 836 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 BRI3BPQ8WY22 251 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 KCNB2Q92953 911 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 MKL1Q969V6 931 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 KANSL2Q9H9L4 492 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 CABP5Q9NP86 173 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 TCP11L1Q9NUJ3 509 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.32□□□□□ -0.28
XRCC1-204ENST00000594511 GTF3C3Q9Y5Q9 886 aa13.32□□□□□ -0.28
XRCC1-204ENST00000594511 CYP21A2P08686 494 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 BACE1P56817 501 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 SPP2Q13103 211 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 SEPT2Q15019 361 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
XRCC1-204ENST00000594511 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 GPAT2Q6NUI2 795 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 TBC1D10CQ8IV04 446 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 ZNF444Q8N0Y2 327 aaPredicted RBP13.31□□□□□ -0.28
XRCC1-204ENST00000594511 C12orf42Q96LP6 360 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 KIAA1683Q9H0B3 1180 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 RNF41Q9H4P4 317 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms