RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 ERVK-24P63145 666 aa10.53□□□□□ -0.72
SMG9-202ENST00000594081 MORN1Q5T089 497 aa10.53□□□□□ -0.72
SMG9-202ENST00000594081 SPTY2D1Q68D10 685 aaPredicted RBP10.53□□□□□ -0.72
SMG9-202ENST00000594081 CCAR1Q8IX12 1150 aaKnown RBP10.53□□□□□ -0.72
SMG9-202ENST00000594081 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
SMG9-202ENST00000594081 MYLIPQ8WY64 445 aa10.53□□□□□ -0.72
SMG9-202ENST00000594081 P2RX7Q99572 595 aaKnown RBP10.53□□□□□ -0.72
SMG9-202ENST00000594081 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
SMG9-202ENST00000594081 WDR18Q9BV38 432 aa10.53□□□□□ -0.72
SMG9-202ENST00000594081 RBPJLQ9UBG7 517 aa10.53□□□□□ -0.72
SMG9-202ENST00000594081 PRKAG2Q9UGJ0 569 aa10.53□□□□□ -0.72
SMG9-202ENST00000594081 HERC5Q9UII4 1024 aaKnown RBP10.53□□□□□ -0.72
SMG9-202ENST00000594081 ZNF236Q9UL36 1845 aa10.52□□□□□ -0.73
SMG9-202ENST00000594081 FOSL2P15408 326 aa10.52□□□□□ -0.73
SMG9-202ENST00000594081 IL15P40933 162 aaPredicted RBP10.52□□□□□ -0.73
SMG9-202ENST00000594081 RTP1P59025 263 aa10.52□□□□□ -0.73
SMG9-202ENST00000594081 C9orf50Q5SZB4 431 aa10.52□□□□□ -0.73
SMG9-202ENST00000594081 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.73
SMG9-202ENST00000594081 PLEKHH3Q7Z736 793 aa10.52□□□□□ -0.73
SMG9-202ENST00000594081 GTF3C2Q8WUA4 911 aaPredicted RBP10.52□□□□□ -0.73
SMG9-202ENST00000594081 TTYH1Q9H313 450 aaPredicted RBP10.52□□□□□ -0.73
SMG9-202ENST00000594081 SEMA6BQ9H3T3 888 aa10.52□□□□□ -0.73
SMG9-202ENST00000594081 MRS2Q9HD23 443 aa10.52□□□□□ -0.73
SMG9-202ENST00000594081 DDX20Q9UHI6 824 aaKnown RBP10.52□□□□□ -0.73
SMG9-202ENST00000594081 PA2G4Q9UQ80 394 aaKnown RBP10.52□□□□□ -0.73
SMG9-202ENST00000594081 MUC3AQ02505 3323 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 DNM1LO00429 736 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 MSCO60682 206 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 MAP4K4O95819 1239 aaPredicted RBP10.51□□□□□ -0.73
SMG9-202ENST00000594081 ASNSP08243 561 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 SHHQ15465 462 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 SHROOM1Q2M3G4 852 aaPredicted RBP10.51□□□□□ -0.73
SMG9-202ENST00000594081 Q3C1V9 767 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 SYMPKQ92797 1274 aaKnown RBP10.51□□□□□ -0.73
SMG9-202ENST00000594081 DNAJC18Q9H819 358 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
SMG9-202ENST00000594081 FLRT1Q9NZU1 646 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 ATP11BQ9Y2G3 1177 aa10.51□□□□□ -0.73
SMG9-202ENST00000594081 DNAH12Q6ZR08 3092 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 A0A1B0GUL7 405 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 C19orf81C9J6K1 198 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 USP17L10C9JJH3 530 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 GDF11O95390 407 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 UBTFL1P0CB47 393 aaPredicted RBP10.5□□□□□ -0.73
SMG9-202ENST00000594081 COL9A1P20849 921 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 GSTO1P78417 241 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 JAG1P78504 1218 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 SMAD3P84022 425 aaKnown RBP10.5□□□□□ -0.73
SMG9-202ENST00000594081 MFSD14CQ5VZR4 134 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 PI16Q6UXB8 463 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 TEX11Q8IYF3 940 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 LPAR1Q92633 364 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 NSUN4Q96CB9 384 aaKnown RBP10.5□□□□□ -0.73
SMG9-202ENST00000594081 PRDM5Q9NQX1 630 aaPredicted RBP10.5□□□□□ -0.73
SMG9-202ENST00000594081 PI4KBQ9UBF8 816 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 NDUFB9Q9Y6M9 179 aa10.5□□□□□ -0.73
SMG9-202ENST00000594081 LDHCP07864 332 aa10.49□□□□□ -0.73
SMG9-202ENST00000594081 CNGA1P29973 690 aa10.49□□□□□ -0.73
SMG9-202ENST00000594081 TIMM10P62072 90 aa10.49□□□□□ -0.73
SMG9-202ENST00000594081 MVPQ14764 893 aaKnown RBP10.49□□□□□ -0.73
SMG9-202ENST00000594081 WDR78Q5VTH9 848 aa10.49□□□□□ -0.73
SMG9-202ENST00000594081 SH3RF3Q8TEJ3 882 aaPredicted RBP10.49□□□□□ -0.73
SMG9-202ENST00000594081 EDC3Q96F86 508 aaKnown RBP10.49□□□□□ -0.73
SMG9-202ENST00000594081 XAGE2Q96GT9 111 aa10.49□□□□□ -0.73
SMG9-202ENST00000594081 HMG20BQ9P0W2 317 aa10.49□□□□□ -0.73
SMG9-202ENST00000594081 ZBTB21Q9ULJ3 1066 aa10.49□□□□□ -0.73
SMG9-202ENST00000594081 A0A0G2JMZ2 1700 aa10.49□□□□□ -0.73
SMG9-202ENST00000594081 CNMDO75829 334 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 GLRX3O76003 335 aaKnown RBP10.48□□□□□ -0.73
SMG9-202ENST00000594081 CYBAP13498 195 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 CYP2C19P33261 490 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 CCNA1P78396 465 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 TRIM60Q495X7 471 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 GJC2Q5T442 439 aaPredicted RBP10.48□□□□□ -0.73
SMG9-202ENST00000594081 TBC1D9Q6ZT07 1266 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 SPATA5Q8NB90 893 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 TRPV1Q8NER1 839 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 SSH1Q8WYL5 1049 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 BADQ92934 168 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 DHX36Q9H2U1 1008 aaKnown RBP10.48□□□□□ -0.73
SMG9-202ENST00000594081 COPRSQ9NQ92 184 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 PDLIM7Q9NR12 457 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 RAI14Q9P0K7 980 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 RABGAP1Q9Y3P9 1069 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 FLT1P17948 1338 aa10.48□□□□□ -0.73
SMG9-202ENST00000594081 TMEM265A0A087WTH1 108 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 SLC15A5A6NIM6 579 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 KBTBD13C9JR72 458 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 TNFRSF10AO00220 468 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 HOXC6P09630 235 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 PTPREP23469 700 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 ATP2B2Q01814 1243 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 TFCP2Q12800 502 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 GRB14Q14449 540 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 SNX17Q15036 470 aa10.47□□□□□ -0.73
SMG9-202ENST00000594081 ZYXQ15942 572 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms