RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SEC23AQ15436 765 aa15.47■□□□□ 0.07
VRK3-205ENST00000593919 TTC6Q86TZ1 520 aa15.47■□□□□ 0.07
VRK3-205ENST00000593919 ZFPM1Q8IX07 1006 aa15.47■□□□□ 0.07
VRK3-205ENST00000593919 CHAMP1Q96JM3 812 aa15.47■□□□□ 0.07
VRK3-205ENST00000593919 ZSCAN10Q96SZ4 725 aaPredicted RBP15.47■□□□□ 0.07
VRK3-205ENST00000593919 ZNF541Q9H0D2 1346 aa15.47■□□□□ 0.07
VRK3-205ENST00000593919 RASA1P20936 1047 aa15.47■□□□□ 0.07
VRK3-205ENST00000593919 ZNF287Q9HBT7 754 aa15.47■□□□□ 0.07
VRK3-205ENST00000593919 CCDC69A6NI79 296 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 NMT2O60551 498 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 BRD1O95696 1058 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 RXRAP19793 462 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 RPS12P25398 132 aaKnown RBP15.46■□□□□ 0.07
VRK3-205ENST00000593919 NT5C2P49902 561 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 GABPAQ06546 454 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 MICU3Q86XE3 530 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 MTMR14Q8NCE2 650 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 MYL10Q9BUA6 226 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 LMBRD1Q9NUN5 540 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 GJA3Q9Y6H8 435 aa15.46■□□□□ 0.07
VRK3-205ENST00000593919 CLRN2A0PK11 232 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 JAK2O60674 1132 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 CTDNEP1O95476 244 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 XRCC6P12956 609 aaKnown RBP eCLIP15.45■□□□□ 0.06
VRK3-205ENST00000593919 NCLP19338 710 aaKnown RBP15.45■□□□□ 0.06
VRK3-205ENST00000593919 TFAP4Q01664 338 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 KLHL40Q2TBA0 621 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 ZNF444Q8N0Y2 327 aaPredicted RBP15.45■□□□□ 0.06
VRK3-205ENST00000593919 TMTC2Q8N394 836 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 NSUN7Q8NE18 718 aaKnown RBP15.45■□□□□ 0.06
VRK3-205ENST00000593919 MYOZ2Q9NPC6 264 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 SERPINB13Q9UIV8 391 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 SLC12A7Q9Y666 1083 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 DDTLA6NHG4 134 aaPredicted RBP15.45■□□□□ 0.06
VRK3-205ENST00000593919 ZBTB43O43298 467 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 GMPSP49915 693 aaPredicted RBP15.45■□□□□ 0.06
VRK3-205ENST00000593919 METAP2P50579 478 aaKnown RBP eCLIP15.45■□□□□ 0.06
VRK3-205ENST00000593919 IFIT1BQ5T764 474 aaKnown RBP15.45■□□□□ 0.06
VRK3-205ENST00000593919 LLPHQ9BRT6 129 aaKnown RBP15.45■□□□□ 0.06
VRK3-205ENST00000593919 DHX36Q9H2U1 1008 aaKnown RBP15.45■□□□□ 0.06
VRK3-205ENST00000593919 TMOD2Q9NZR1 351 aa15.45■□□□□ 0.06
VRK3-205ENST00000593919 WNT10BO00744 389 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 PRPF40AO75400 957 aaKnown RBP15.44■□□□□ 0.06
VRK3-205ENST00000593919 TSPY3P0CV98 308 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 TSPY8P0CW00 308 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 ZNF280AP59817 542 aaPredicted RBP15.44■□□□□ 0.06
VRK3-205ENST00000593919 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 ZBED3Q96IU2 234 aaPredicted RBP15.44■□□□□ 0.06
VRK3-205ENST00000593919 IL17RBQ9NRM6 502 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 ZNF70Q9UC06 446 aaPredicted RBP15.44■□□□□ 0.06
VRK3-205ENST00000593919 MYH6P13533 1939 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 ENTPD3O75355 529 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 SYT1P21579 422 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 ZSCAN29Q8IWY8 852 aaPredicted RBP15.44■□□□□ 0.06
VRK3-205ENST00000593919 MICALL2Q8IY33 904 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 CCDC144CPQ8IYA2 1237 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 ZNF654Q8IZM8 581 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 DPF2Q92785 391 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 EHD4Q9H223 541 aa15.44■□□□□ 0.06
VRK3-205ENST00000593919 NID2Q14112 1375 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 ATRNL1Q5VV63 1379 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 TCHHQ07283 1943 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 COL2A1P02458 1487 aaPredicted RBP15.43■□□□□ 0.06
VRK3-205ENST00000593919 PTPDC1A2A3K4 754 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 TCP10L2B9ZVM9 353 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 DHX16O60231 1041 aaKnown RBP15.43■□□□□ 0.06
VRK3-205ENST00000593919 PPFIA3O75145 1194 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 EGFRP00533 1210 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 CDC27P30260 824 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 MRE11P49959 708 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 MMP14P50281 582 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 NBPF9Q3BBW0 867 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 SYNE3Q6ZMZ3 975 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 DDX11Q96FC9 970 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 PANK2Q9BZ23 570 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 SWAP70Q9UH65 585 aa15.43■□□□□ 0.06
VRK3-205ENST00000593919 GREB1LQ9C091 1923 aaPredicted RBP15.43■□□□□ 0.06
VRK3-205ENST00000593919 GOLGA8AA7E2F4 631 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 SLURP2P0DP57 97 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 ADD1P35611 737 aaKnown RBP15.42■□□□□ 0.06
VRK3-205ENST00000593919 RCSD1Q6JBY9 416 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 GAS2L3Q86XJ1 694 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 CHMP4CQ96CF2 233 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 DNAJC18Q9H819 358 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 GRPEL1Q9HAV7 217 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 VEZTQ9HBM0 779 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 PI4KBQ9UBF8 816 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 CNOT7Q9UIV1 285 aaKnown RBP15.42■□□□□ 0.06
VRK3-205ENST00000593919 BAZ2BQ9UIF8 2168 aaKnown RBP15.42■□□□□ 0.06
VRK3-205ENST00000593919 CPLX1O14810 134 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 STX6O43752 255 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 MYO1BO43795 1136 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 SHMT1P34896 483 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 RCAN1P53805 252 aa15.42■□□□□ 0.06
VRK3-205ENST00000593919 HMGN5P82970 282 aaKnown RBP15.42■□□□□ 0.06
VRK3-205ENST00000593919 CAVIN1Q6NZI2 390 aaKnown RBP15.42■□□□□ 0.06
VRK3-205ENST00000593919 FAM217BQ9NTX9 383 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms