RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 RNF113AO15541 343 aaKnown RBP24.12■■□□□ 1.45
COPE-204ENST00000593827 GDF11O95390 407 aa24.12■■□□□ 1.45
COPE-204ENST00000593827 RRP1BQ14684 758 aaKnown RBP24.12■■□□□ 1.45
COPE-204ENST00000593827 SH3D19Q5HYK7 790 aa24.12■■□□□ 1.45
COPE-204ENST00000593827 TSHZ3Q63HK5 1081 aa24.12■■□□□ 1.45
COPE-204ENST00000593827 APPBP2Q92624 585 aa24.12■■□□□ 1.45
COPE-204ENST00000593827 SLC4A4Q9Y6R1 1079 aa24.12■■□□□ 1.45
COPE-204ENST00000593827 USP17L10C9JJH3 530 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 GNAT2P19087 354 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 OSBPP22059 807 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 HOXD10P28358 340 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 HMGCS2P54868 508 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 PRMT2P55345 433 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 BACE1P56817 501 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 LACTBP83111 547 aaPredicted RBP24.11■■□□□ 1.45
COPE-204ENST00000593827 ABCB5Q2M3G0 1257 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 CCDC84Q86UT8 332 aaPredicted RBP24.11■■□□□ 1.45
COPE-204ENST00000593827 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.11■■□□□ 1.45
COPE-204ENST00000593827 CPA4Q9UI42 421 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 FOCADQ5VW36 1801 aa24.11■■□□□ 1.45
COPE-204ENST00000593827 GH2P01242 217 aa24.1■■□□□ 1.45
COPE-204ENST00000593827 PLCD1P51178 756 aa24.1■■□□□ 1.45
COPE-204ENST00000593827 EXOC6Q8TAG9 804 aa24.1■■□□□ 1.45
COPE-204ENST00000593827 PI4K2BQ8TCG2 481 aa24.1■■□□□ 1.45
COPE-204ENST00000593827 PTPN22Q9Y2R2 807 aa24.1■■□□□ 1.45
COPE-204ENST00000593827 MTMR2Q13614 643 aa24.09■■□□□ 1.45
COPE-204ENST00000593827 GIMAP6Q6P9H5 292 aa24.09■■□□□ 1.45
COPE-204ENST00000593827 FSD1Q9BTV5 496 aa24.09■■□□□ 1.45
COPE-204ENST00000593827 PUS7LQ9H0K6 701 aaKnown RBP24.09■■□□□ 1.45
COPE-204ENST00000593827 CYP2C8P10632 490 aa24.08■■□□□ 1.45
COPE-204ENST00000593827 USP14P54578 494 aa24.08■■□□□ 1.45
COPE-204ENST00000593827 GABPAQ06546 454 aa24.08■■□□□ 1.45
COPE-204ENST00000593827 TICAM2Q86XR7 235 aa24.08■■□□□ 1.45
COPE-204ENST00000593827 ARPP21Q9UBL0 812 aaPredicted RBP24.08■■□□□ 1.45
COPE-204ENST00000593827 STAP2Q9UGK3 403 aa24.08■■□□□ 1.45
COPE-204ENST00000593827 ADGRA2Q96PE1 1338 aa24.08■■□□□ 1.44
COPE-204ENST00000593827 PRKAB2O43741 272 aa24.07■■□□□ 1.44
COPE-204ENST00000593827 SHMT1P34896 483 aa24.07■■□□□ 1.44
COPE-204ENST00000593827 GCLCP48506 637 aaPredicted RBP24.07■■□□□ 1.44
COPE-204ENST00000593827 RAB3GAP1Q15042 981 aa24.07■■□□□ 1.44
COPE-204ENST00000593827 USP17L2Q6R6M4 530 aa24.07■■□□□ 1.44
COPE-204ENST00000593827 SMC5Q8IY18 1101 aa24.07■■□□□ 1.44
COPE-204ENST00000593827 OTUD7AQ8TE49 926 aaPredicted RBP24.07■■□□□ 1.44
COPE-204ENST00000593827 STRBPQ96SI9 672 aaKnown RBP24.07■■□□□ 1.44
COPE-204ENST00000593827 FEZ1Q99689 392 aa24.07■■□□□ 1.44
COPE-204ENST00000593827 RGS19P49795 217 aa24.06■■□□□ 1.44
COPE-204ENST00000593827 IRX3P78415 501 aaPredicted RBP24.06■■□□□ 1.44
COPE-204ENST00000593827 SLFNL1Q499Z3 407 aa24.06■■□□□ 1.44
COPE-204ENST00000593827 NBPF11Q86T75 865 aa24.06■■□□□ 1.44
COPE-204ENST00000593827 EVI5LQ96CN4 794 aa24.06■■□□□ 1.44
COPE-204ENST00000593827 CCDC17Q96LX7 622 aa24.06■■□□□ 1.44
COPE-204ENST00000593827 CDK5RAP2Q96SN8 1893 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 USP17L12C9JPN9 530 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 USP17L21D6R901 530 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 MPHOSPH10O00566 681 aaKnown RBP24.05■■□□□ 1.44
COPE-204ENST00000593827 FMNL1O95466 1100 aaPredicted RBP24.05■■□□□ 1.44
COPE-204ENST00000593827 BCRP11274 1271 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 PSMC4P43686 418 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 PDE1AP54750 535 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 FCGRTP55899 365 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 TREML2Q5T2D2 321 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 C12orf60Q5U649 245 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 GTF3C2Q8WUA4 911 aaPredicted RBP24.05■■□□□ 1.44
COPE-204ENST00000593827 OSBP2Q969R2 916 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 NACAP1Q9BZK3 213 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 SALL3Q9BXA9 1300 aa24.05■■□□□ 1.44
COPE-204ENST00000593827 MYH1P12882 1939 aa24.04■■□□□ 1.44
COPE-204ENST00000593827 HOXA7P31268 230 aaPredicted RBP24.04■■□□□ 1.44
COPE-204ENST00000593827 JAG1P78504 1218 aa24.04■■□□□ 1.44
COPE-204ENST00000593827 TMEM179Q6ZVK1 233 aa24.04■■□□□ 1.44
COPE-204ENST00000593827 ZNF287Q9HBT7 754 aa24.04■■□□□ 1.44
COPE-204ENST00000593827 SIPA1L1O43166 1804 aa24.03■■□□□ 1.44
COPE-204ENST00000593827 GPAA1O43292 621 aa24.03■■□□□ 1.44
COPE-204ENST00000593827 LNPKQ9C0E8 428 aa24.03■■□□□ 1.44
COPE-204ENST00000593827 KIAA1683Q9H0B3 1180 aa24.03■■□□□ 1.44
COPE-204ENST00000593827 CHGBP05060 677 aa24.02■■□□□ 1.44
COPE-204ENST00000593827 APPP05067 770 aa24.02■■□□□ 1.44
COPE-204ENST00000593827 FAM110CQ1W6H9 321 aa24.02■■□□□ 1.44
COPE-204ENST00000593827 SBK1Q52WX2 424 aa24.02■■□□□ 1.44
COPE-204ENST00000593827 CTR9Q6PD62 1173 aa24.02■■□□□ 1.44
COPE-204ENST00000593827 C16orf86Q6ZW13 317 aa24.02■■□□□ 1.44
COPE-204ENST00000593827 CHD1LQ86WJ1 897 aa24.02■■□□□ 1.44
COPE-204ENST00000593827 ASCC2Q9H1I8 757 aaPredicted RBP24.02■■□□□ 1.44
COPE-204ENST00000593827 SH2D4AQ9H788 454 aa24.02■■□□□ 1.44
COPE-204ENST00000593827 NAV1Q8NEY1 1877 aa24.01■■□□□ 1.43
COPE-204ENST00000593827 CYP2D6P10635 497 aa24.01■■□□□ 1.43
COPE-204ENST00000593827 TDO2P48775 406 aa24.01■■□□□ 1.43
COPE-204ENST00000593827 NUCB1Q02818 461 aa24.01■■□□□ 1.43
COPE-204ENST00000593827 SLC9C1Q4G0N8 1177 aa24.01■■□□□ 1.43
COPE-204ENST00000593827 B4GALNT3Q6L9W6 998 aa24.01■■□□□ 1.43
COPE-204ENST00000593827 C12orf42Q96LP6 360 aa24.01■■□□□ 1.43
COPE-204ENST00000593827 SRRDQ9UH36 339 aa24.01■■□□□ 1.43
COPE-204ENST00000593827 GSG1L2A8MUP6 293 aa24■■□□□ 1.43
COPE-204ENST00000593827 PATL2C9JE40 543 aaKnown RBP24■■□□□ 1.43
COPE-204ENST00000593827 CDK8P49336 464 aa24■■□□□ 1.43
COPE-204ENST00000593827 MLLT1Q03111 559 aaPredicted RBP24■■□□□ 1.43
COPE-204ENST00000593827 SHROOM1Q2M3G4 852 aaPredicted RBP24■■□□□ 1.43
COPE-204ENST00000593827 ZMYM1Q5SVZ6 1142 aa24■■□□□ 1.43
COPE-204ENST00000593827 ANKRD13CQ8N6S4 541 aa24■■□□□ 1.43
COPE-204ENST00000593827 DYNLL2Q96FJ2 89 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms