RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MORF4L1Q9UBU8 362 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 SAP30BPQ9UHR5 308 aaKnown RBP13.09□□□□□ -0.31
USE1-203ENST00000593597 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 MYH8P13535 1937 aa13.09□□□□□ -0.31
USE1-203ENST00000593597 A0A0G2JMZ2 1700 aa13.08□□□□□ -0.32
USE1-203ENST00000593597 MYH7P12883 1935 aa13.08□□□□□ -0.32
USE1-203ENST00000593597 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
USE1-203ENST00000593597 EVX2Q03828 476 aa13.08□□□□□ -0.32
USE1-203ENST00000593597 CEP85Q6P2H3 762 aa13.08□□□□□ -0.32
USE1-203ENST00000593597 DPF3Q92784 378 aa13.08□□□□□ -0.32
USE1-203ENST00000593597 DEFB118Q96PH6 123 aa13.08□□□□□ -0.32
USE1-203ENST00000593597 ZBTB21Q9ULJ3 1066 aa13.08□□□□□ -0.32
USE1-203ENST00000593597 BAZ2AQ9UIF9 1905 aaKnown RBP13.07□□□□□ -0.32
USE1-203ENST00000593597 COL6A3P12111 3177 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 BACE1P56817 501 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 CCDC158Q5M9N0 1113 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 ITPRIPQ8IWB1 547 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 MIER1Q8N108 512 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 MIGA1Q8NAN2 632 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 TRIB2Q92519 343 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
USE1-203ENST00000593597 TBC1D2Q9BYX2 928 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.07□□□□□ -0.32
USE1-203ENST00000593597 DHX36Q9H2U1 1008 aaKnown RBP13.07□□□□□ -0.32
USE1-203ENST00000593597 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
USE1-203ENST00000593597 BAG3O95817 575 aa13.06□□□□□ -0.32
USE1-203ENST00000593597 CYP7A1P22680 504 aa13.06□□□□□ -0.32
USE1-203ENST00000593597 HOXA7P31268 230 aaPredicted RBP13.06□□□□□ -0.32
USE1-203ENST00000593597 GCLCP48506 637 aaPredicted RBP13.06□□□□□ -0.32
USE1-203ENST00000593597 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
USE1-203ENST00000593597 OS9Q13438 667 aaPredicted RBP13.06□□□□□ -0.32
USE1-203ENST00000593597 Q3C1V9 767 aa13.06□□□□□ -0.32
USE1-203ENST00000593597 COA7Q96BR5 231 aa13.06□□□□□ -0.32
USE1-203ENST00000593597 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
USE1-203ENST00000593597 EXOC6BQ9Y2D4 811 aa13.06□□□□□ -0.32
USE1-203ENST00000593597 CNMDO75829 334 aa13.05□□□□□ -0.32
USE1-203ENST00000593597 ASNSP08243 561 aa13.05□□□□□ -0.32
USE1-203ENST00000593597 PLCG2P16885 1265 aa13.05□□□□□ -0.32
USE1-203ENST00000593597 HERVK_113P62684 666 aa13.05□□□□□ -0.32
USE1-203ENST00000593597 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
USE1-203ENST00000593597 NOL10Q9BSC4 688 aaKnown RBP13.05□□□□□ -0.32
USE1-203ENST00000593597 PORCNQ9H237 461 aa13.05□□□□□ -0.32
USE1-203ENST00000593597 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
USE1-203ENST00000593597 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
USE1-203ENST00000593597 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
USE1-203ENST00000593597 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
USE1-203ENST00000593597 GH2P01242 217 aa13.04□□□□□ -0.32
USE1-203ENST00000593597 HMGCRP04035 888 aa13.04□□□□□ -0.32
USE1-203ENST00000593597 MAP3K21Q5TCX8 1036 aa13.04□□□□□ -0.32
USE1-203ENST00000593597 TATDN1Q6P1N9 297 aa13.04□□□□□ -0.32
USE1-203ENST00000593597 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
USE1-203ENST00000593597 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
USE1-203ENST00000593597 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
USE1-203ENST00000593597 USP6NLQ92738 828 aa13.04□□□□□ -0.32
USE1-203ENST00000593597 PAWRQ96IZ0 340 aaKnown RBP13.04□□□□□ -0.32
USE1-203ENST00000593597 RIOK1Q9BRS2 568 aaKnown RBP13.04□□□□□ -0.32
USE1-203ENST00000593597 HTATIP2Q9BUP3 242 aa13.04□□□□□ -0.32
USE1-203ENST00000593597 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
USE1-203ENST00000593597 LAMA2P24043 3122 aaKnown RBP13.03□□□□□ -0.32
USE1-203ENST00000593597 SOX1O00570 391 aaPredicted RBP13.03□□□□□ -0.32
USE1-203ENST00000593597 TFRCP02786 760 aaKnown RBP13.03□□□□□ -0.32
USE1-203ENST00000593597 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
USE1-203ENST00000593597 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
USE1-203ENST00000593597 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.32
USE1-203ENST00000593597 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
USE1-203ENST00000593597 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
USE1-203ENST00000593597 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
USE1-203ENST00000593597 ZNF236Q9UL36 1845 aa13.03□□□□□ -0.32
USE1-203ENST00000593597 C19orf81C9J6K1 198 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 IGSF3O75054 1194 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 CYP2B6P20813 491 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 SHMT1P34896 483 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 PLCD1P51178 756 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 ERVK-9P63128 1117 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 ERVK-24P63145 666 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 ZYXQ15942 572 aaKnown RBP13.02□□□□□ -0.33
USE1-203ENST00000593597 CCL14Q16627 93 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 AACSQ86V21 672 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 ACER1Q8TDN7 264 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 TMOD4Q9NZQ9 345 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 PFASO15067 1338 aa13.02□□□□□ -0.33
USE1-203ENST00000593597 CHGBP05060 677 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 HLA-DOAP06340 250 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 GABPAQ06546 454 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 SLFNL1Q499Z3 407 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 MORN1Q5T089 497 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 GPRC5AQ8NFJ5 357 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 EDC3Q96F86 508 aaKnown RBP13.01□□□□□ -0.33
USE1-203ENST00000593597 EHD4Q9H223 541 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 GINM1Q9NU53 330 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 OGDHLQ9ULD0 1010 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 RPTORQ8N122 1335 aa13.01□□□□□ -0.33
USE1-203ENST00000593597 GREB1LQ9C091 1923 aaPredicted RBP13.01□□□□□ -0.33
USE1-203ENST00000593597 LTBP2Q14767 1821 aa13□□□□□ -0.33
USE1-203ENST00000593597 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
USE1-203ENST00000593597 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
USE1-203ENST00000593597 SMIM22K7EJ46 135 aa13□□□□□ -0.33
USE1-203ENST00000593597 EVI5O60447 810 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms