RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 TRIM47Q96LD4 638 aa21.44■■□□□ 1.02
CIRBP-244ENST00000593283 CRBNQ96SW2 442 aa21.44■■□□□ 1.02
CIRBP-244ENST00000593283 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.44■■□□□ 1.021e-7■■■□□ 16.8
CIRBP-244ENST00000593283 ECHDC1Q9NTX5 307 aa21.44■■□□□ 1.02
CIRBP-244ENST00000593283 SERPINB13Q9UIV8 391 aa21.44■■□□□ 1.02
CIRBP-244ENST00000593283 DOCK3Q8IZD9 2030 aa21.44■■□□□ 1.02
CIRBP-244ENST00000593283 PSMC4P43686 418 aa21.43■■□□□ 1.02
CIRBP-244ENST00000593283 MTMR2Q13614 643 aa21.43■■□□□ 1.02
CIRBP-244ENST00000593283 TSHZ3Q63HK5 1081 aa21.43■■□□□ 1.02
CIRBP-244ENST00000593283 SMCR8Q8TEV9 937 aaPredicted RBP21.43■■□□□ 1.02
CIRBP-244ENST00000593283 WDR18Q9BV38 432 aa21.43■■□□□ 1.02
CIRBP-244ENST00000593283 MBD4O95243 580 aa21.42■■□□□ 1.02
CIRBP-244ENST00000593283 GNRH1P01148 92 aa21.42■■□□□ 1.02
CIRBP-244ENST00000593283 CHGBP05060 677 aa21.42■■□□□ 1.02
CIRBP-244ENST00000593283 TTC6Q86TZ1 520 aa21.42■■□□□ 1.02
CIRBP-244ENST00000593283 SDR42E1Q8WUS8 393 aa21.42■■□□□ 1.02
CIRBP-244ENST00000593283 GPATCH3Q96I76 525 aa21.42■■□□□ 1.02
CIRBP-244ENST00000593283 ARMT1Q9H993 441 aa21.42■■□□□ 1.02
CIRBP-244ENST00000593283 GINM1Q9NU53 330 aa21.42■■□□□ 1.02
CIRBP-244ENST00000593283 GH2P01242 217 aa21.41■■□□□ 1.02
CIRBP-244ENST00000593283 PLCD1P51178 756 aa21.41■■□□□ 1.02
CIRBP-244ENST00000593283 SLC9C1Q4G0N8 1177 aa21.41■■□□□ 1.02
CIRBP-244ENST00000593283 SH3D19Q5HYK7 790 aa21.41■■□□□ 1.02
CIRBP-244ENST00000593283 MCM9Q9NXL9 1143 aa21.41■■□□□ 1.02
CIRBP-244ENST00000593283 PNMA3Q9UL41 463 aa21.41■■□□□ 1.02
CIRBP-244ENST00000593283 FMNL1O95466 1100 aaPredicted RBP21.4■■□□□ 1.02
CIRBP-244ENST00000593283 POLR3DP05423 398 aaPredicted RBP21.4■■□□□ 1.02
CIRBP-244ENST00000593283 OSBPP22059 807 aa21.4■■□□□ 1.02
CIRBP-244ENST00000593283 BACE1P56817 501 aa21.4■■□□□ 1.02
CIRBP-244ENST00000593283 EVX2Q03828 476 aa21.4■■□□□ 1.02
CIRBP-244ENST00000593283 TATDN1Q6P1N9 297 aa21.4■■□□□ 1.02
CIRBP-244ENST00000593283 DCP1AQ9NPI6 582 aaPredicted RBP21.4■■□□□ 1.02
CIRBP-244ENST00000593283 SHMT1P34896 483 aa21.39■■□□□ 1.01
CIRBP-244ENST00000593283 PRMT2P55345 433 aa21.39■■□□□ 1.01
CIRBP-244ENST00000593283 FCGRTP55899 365 aa21.39■■□□□ 1.01
CIRBP-244ENST00000593283 UBE3CQ15386 1083 aa21.39■■□□□ 1.01
CIRBP-244ENST00000593283 ZNF333Q96JL9 665 aa21.39■■□□□ 1.01
CIRBP-244ENST00000593283 SRRDQ9UH36 339 aa21.39■■□□□ 1.01
CIRBP-244ENST00000593283 MYPNQ86TC9 1320 aa21.38■■□□□ 1.01
CIRBP-244ENST00000593283 POTEFA5A3E0 1075 aa21.38■■□□□ 1.01
CIRBP-244ENST00000593283 PRKAB2O43741 272 aa21.38■■□□□ 1.01
CIRBP-244ENST00000593283 CYP2D6P10635 497 aa21.38■■□□□ 1.01
CIRBP-244ENST00000593283 PABPC4Q13310 644 aaKnown RBP eCLIP21.38■■□□□ 1.012e-9■□□□□ 10
CIRBP-244ENST00000593283 ANKRD13CQ8N6S4 541 aa21.38■■□□□ 1.01
CIRBP-244ENST00000593283 ASCC2Q9H1I8 757 aaPredicted RBP21.38■■□□□ 1.01
CIRBP-244ENST00000593283 TMOD4Q9NZQ9 345 aa21.38■■□□□ 1.01
CIRBP-244ENST00000593283 USP17L10C9JJH3 530 aa21.37■■□□□ 1.01
CIRBP-244ENST00000593283 GABPAQ06546 454 aa21.37■■□□□ 1.01
CIRBP-244ENST00000593283 CERKLQ49MI3 558 aaPredicted RBP21.37■■□□□ 1.01
CIRBP-244ENST00000593283 ZSCAN25Q6NSZ9 544 aa21.37■■□□□ 1.01
CIRBP-244ENST00000593283 SH3TC2Q8TF17 1288 aa21.37■■□□□ 1.01
CIRBP-244ENST00000593283 C19orf81C9J6K1 198 aa21.36■■□□□ 1.01
CIRBP-244ENST00000593283 HOXD10P28358 340 aa21.36■■□□□ 1.01
CIRBP-244ENST00000593283 PRKCZQ05513 592 aa21.36■■□□□ 1.01
CIRBP-244ENST00000593283 FAM110CQ1W6H9 321 aa21.36■■□□□ 1.01
CIRBP-244ENST00000593283 ABCB5Q2M3G0 1257 aa21.36■■□□□ 1.01
CIRBP-244ENST00000593283 OTUD7AQ8TE49 926 aaPredicted RBP21.36■■□□□ 1.01
CIRBP-244ENST00000593283 FEZ1Q99689 392 aa21.36■■□□□ 1.01
CIRBP-244ENST00000593283 IRX3P78415 501 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-244ENST00000593283 RAB3GAP1Q15042 981 aa21.35■■□□□ 1.01
CIRBP-244ENST00000593283 NBPF11Q86T75 865 aa21.35■■□□□ 1.01
CIRBP-244ENST00000593283 KBTBD3Q8NAB2 608 aa21.35■■□□□ 1.01
CIRBP-244ENST00000593283 SLC44A5Q8NCS7 719 aa21.35■■□□□ 1.01
CIRBP-244ENST00000593283 RAET1EQ8TD07 263 aa21.35■■□□□ 1.01
CIRBP-244ENST00000593283 PUS7LQ9H0K6 701 aaKnown RBP21.35■■□□□ 1.01
CIRBP-244ENST00000593283 ATP8A2Q9NTI2 1148 aa21.35■■□□□ 1.01
CIRBP-244ENST00000593283 MYCP01106 439 aaPredicted RBP21.34■■□□□ 1.01
CIRBP-244ENST00000593283 GCLCP48506 637 aaPredicted RBP21.34■■□□□ 1.01
CIRBP-244ENST00000593283 ZYXQ15942 572 aaKnown RBP21.34■■□□□ 1.01
CIRBP-244ENST00000593283 USP17L2Q6R6M4 530 aa21.34■■□□□ 1.01
CIRBP-244ENST00000593283 GABRQQ9UN88 632 aa21.34■■□□□ 1.01
CIRBP-244ENST00000593283 TTC41PQ6P2S7 1318 aa21.33■■□□□ 1.01
CIRBP-244ENST00000593283 TNPO2O14787 897 aaKnown RBP21.33■■□□□ 1.01
CIRBP-244ENST00000593283 GUCY1A2P33402 732 aa21.33■■□□□ 1.01
CIRBP-244ENST00000593283 DYNLL2Q96FJ2 89 aa21.33■■□□□ 1.01
CIRBP-244ENST00000593283 CABP5Q9NP86 173 aa21.33■■□□□ 1.01
CIRBP-244ENST00000593283 EMILIN3Q9NT22 766 aa21.33■■□□□ 1.01
CIRBP-244ENST00000593283 SLC4A4Q9Y6R1 1079 aa21.33■■□□□ 1.01
CIRBP-244ENST00000593283 PLXNB2O15031 1838 aa21.33■■□□□ 1.01
CIRBP-244ENST00000593283 CYP2D7A0A087X1C5 515 aa21.32■■□□□ 1
CIRBP-244ENST00000593283 HOXA7P31268 230 aaPredicted RBP21.32■■□□□ 1
CIRBP-244ENST00000593283 PI4K2BQ8TCG2 481 aa21.32■■□□□ 1
CIRBP-244ENST00000593283 ACER1Q8TDN7 264 aa21.32■■□□□ 1
CIRBP-244ENST00000593283 TMEM106CQ9BVX2 250 aa21.32■■□□□ 1
CIRBP-244ENST00000593283 SMIM22K7EJ46 135 aa21.31■■□□□ 1
CIRBP-244ENST00000593283 MPHOSPH10O00566 681 aaKnown RBP21.31■■□□□ 1
CIRBP-244ENST00000593283 MX1P20591 662 aa21.31■■□□□ 1
CIRBP-244ENST00000593283 GRK4P32298 578 aa21.31■■□□□ 1
CIRBP-244ENST00000593283 SEPT2Q15019 361 aa21.31■■□□□ 1
CIRBP-244ENST00000593283 DDRGK1Q96HY6 314 aa21.31■■□□□ 1
CIRBP-244ENST00000593283 C12orf42Q96LP6 360 aa21.31■■□□□ 1
CIRBP-244ENST00000593283 SWAP70Q9UH65 585 aa21.31■■□□□ 1
CIRBP-244ENST00000593283 BRCA2P51587 3418 aa21.3■■□□□ 1
CIRBP-244ENST00000593283 ERC2O15083 957 aa21.3■■□□□ 1
CIRBP-244ENST00000593283 EN2P19622 333 aaPredicted RBP21.3■■□□□ 1
CIRBP-244ENST00000593283 HERVK_113P62684 666 aa21.3■■□□□ 1
CIRBP-244ENST00000593283 HDAC1Q13547 482 aaPredicted RBP21.3■■□□□ 1
CIRBP-244ENST00000593283 C12orf60Q5U649 245 aa21.3■■□□□ 1
CIRBP-244ENST00000593283 AMOTL1Q8IY63 956 aa21.3■■□□□ 1
CIRBP-244ENST00000593283 APPBP2Q92624 585 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms