RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ADCY3O60266 1144 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 RAB11FIP3O75154 756 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 GJB1P08034 283 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 CCL5P13501 91 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 HOXA7P31268 230 aaPredicted RBP16.14■□□□□ 0.17
APOC1-209ENST00000592885 USP5P45974 858 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 GJA8P48165 433 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 FLT3LGP49771 235 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 MTMR2Q13614 643 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 MTFR1Q15390 333 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
APOC1-209ENST00000592885 ANTXR1Q9H6X2 564 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 IL1RAPL2Q9NP60 686 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 GABRQQ9UN88 632 aa16.14■□□□□ 0.17
APOC1-209ENST00000592885 MYCP01106 439 aaPredicted RBP16.13■□□□□ 0.17
APOC1-209ENST00000592885 IRX3P78415 501 aaPredicted RBP16.13■□□□□ 0.17
APOC1-209ENST00000592885 TATDN1Q6P1N9 297 aa16.13■□□□□ 0.17
APOC1-209ENST00000592885 TTC6Q86TZ1 520 aa16.13■□□□□ 0.17
APOC1-209ENST00000592885 MIGA1Q8NAN2 632 aa16.13■□□□□ 0.17
APOC1-209ENST00000592885 GTF3C2Q8WUA4 911 aaPredicted RBP16.13■□□□□ 0.17
APOC1-209ENST00000592885 SHISA4Q96DD7 197 aa16.13■□□□□ 0.17
APOC1-209ENST00000592885 MORF4L1Q9UBU8 362 aa16.13■□□□□ 0.17
APOC1-209ENST00000592885 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
APOC1-209ENST00000592885 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
APOC1-209ENST00000592885 SERPINB13Q9UIV8 391 aa16.13■□□□□ 0.17
APOC1-209ENST00000592885 RCAN3Q9UKA8 241 aa16.13■□□□□ 0.17
APOC1-209ENST00000592885 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
APOC1-209ENST00000592885 USP17L10C9JJH3 530 aa16.12■□□□□ 0.17
APOC1-209ENST00000592885 GDF11O95390 407 aa16.12■□□□□ 0.17
APOC1-209ENST00000592885 IFIT2P09913 472 aaKnown RBP16.12■□□□□ 0.17
APOC1-209ENST00000592885 RIOK1Q9BRS2 568 aaKnown RBP16.12■□□□□ 0.17
APOC1-209ENST00000592885 RNF208Q9H0X6 261 aa16.12■□□□□ 0.17
APOC1-209ENST00000592885 TAOK2Q9UL54 1235 aa16.12■□□□□ 0.17
APOC1-209ENST00000592885 NDUFB9Q9Y6M9 179 aa16.12■□□□□ 0.17
APOC1-209ENST00000592885 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
APOC1-209ENST00000592885 SIRT2Q8IXJ6 389 aa16.11■□□□□ 0.17
APOC1-209ENST00000592885 CRNKL1Q9BZJ0 848 aaKnown RBP16.11■□□□□ 0.17
APOC1-209ENST00000592885 MKI67P46013 3256 aaKnown RBP16.11■□□□□ 0.17
APOC1-209ENST00000592885 MYH7P12883 1935 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 MAGEB6P1A0A0J9YX57 407 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 INHAP05111 366 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 PDE6AP16499 860 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 JAG1P78504 1218 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 SLC9C2Q5TAH2 1124 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 USP17L2Q6R6M4 530 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 C12orf42Q96LP6 360 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 DOCK3Q8IZD9 2030 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
APOC1-209ENST00000592885 GH2P01242 217 aa16.09■□□□□ 0.17
APOC1-209ENST00000592885 USP14P54578 494 aa16.09■□□□□ 0.17
APOC1-209ENST00000592885 HERVK_113P62684 666 aa16.09■□□□□ 0.17
APOC1-209ENST00000592885 UBE2Q1Q7Z7E8 422 aa16.09■□□□□ 0.17
APOC1-209ENST00000592885 U2AF1L4Q8WU68 220 aaKnown RBP16.09■□□□□ 0.17
APOC1-209ENST00000592885 HTATIP2Q9BUP3 242 aa16.09■□□□□ 0.17
APOC1-209ENST00000592885 UNC93B1Q9H1C4 597 aa16.09■□□□□ 0.17
APOC1-209ENST00000592885 MYH8P13535 1937 aa16.08■□□□□ 0.16
APOC1-209ENST00000592885 GOLIM4O00461 696 aa16.08■□□□□ 0.16
APOC1-209ENST00000592885 SGPL1O95470 568 aa16.08■□□□□ 0.16
APOC1-209ENST00000592885 HMGCRP04035 888 aa16.08■□□□□ 0.16
APOC1-209ENST00000592885 ELNP15502 786 aa16.08■□□□□ 0.16
APOC1-209ENST00000592885 SOCS4Q8WXH5 440 aa16.08■□□□□ 0.16
APOC1-209ENST00000592885 DNAJC2Q99543 621 aaKnown RBP16.08■□□□□ 0.16
APOC1-209ENST00000592885 PAK6Q9NQU5 681 aaPredicted RBP16.08■□□□□ 0.16
APOC1-209ENST00000592885 PCDH10Q9P2E7 1040 aa16.08■□□□□ 0.16
APOC1-209ENST00000592885 ZNF532Q9HCE3 1301 aa16.08■□□□□ 0.16
APOC1-209ENST00000592885 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 APBB1O00213 710 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
APOC1-209ENST00000592885 ATP5JP18859 108 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 ABCB5Q2M3G0 1257 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 SHROOM1Q2M3G4 852 aaPredicted RBP16.07■□□□□ 0.16
APOC1-209ENST00000592885 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
APOC1-209ENST00000592885 GPRC5AQ8NFJ5 357 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 P2RX7Q99572 595 aaKnown RBP16.07■□□□□ 0.16
APOC1-209ENST00000592885 FEZ1Q99689 392 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.07■□□□□ 0.16
APOC1-209ENST00000592885 KIAA1683Q9H0B3 1180 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 CABP5Q9NP86 173 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 PAG1Q9NWQ8 432 aa16.07■□□□□ 0.16
APOC1-209ENST00000592885 FARP2O94887 1054 aaPredicted RBP16.06■□□□□ 0.16
APOC1-209ENST00000592885 MAPK4P31152 587 aa16.06■□□□□ 0.16
APOC1-209ENST00000592885 SHMT1P34896 483 aa16.06■□□□□ 0.16
APOC1-209ENST00000592885 GABPAQ06546 454 aa16.06■□□□□ 0.16
APOC1-209ENST00000592885 HABP4Q5JVS0 413 aaKnown RBP16.06■□□□□ 0.16
APOC1-209ENST00000592885 GJD2Q9UKL4 321 aa16.06■□□□□ 0.16
APOC1-209ENST00000592885 USP17L15C9J2P7 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 USP17L13C9JLJ4 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 USP17L11C9JVI0 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 USP17L18D6R9N7 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 USP17L22D6RA61 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 USP17L17D6RBQ6 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 USP17L19D6RCP7 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 USP17L20D6RJB6 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 ADD2P35612 726 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 PLCD1P51178 756 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 ERVK-9P63128 1117 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 ERVK-24P63145 666 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 USP17L24Q0WX57 530 aa16.05■□□□□ 0.16
APOC1-209ENST00000592885 RAB3GAP1Q15042 981 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms