RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.88	■□□□□ 0.61
RFX2-223	ENST00000592883	CRISPLD2	Q9H0B8	497 aa		18.88	■□□□□ 0.61
RFX2-223	ENST00000592883	GJD2	Q9UKL4	321 aa		18.88	■□□□□ 0.61
RFX2-223	ENST00000592883	NOP58	Q9Y2X3	529 aa	Known RBP	18.88	■□□□□ 0.61
RFX2-223	ENST00000592883	DDX60L	Q5H9U9	1706 aa	Known RBP	18.88	■□□□□ 0.61
RFX2-223	ENST00000592883	ZBTB7B	O15156	539 aa	Predicted RBP	18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	IRX3	P78415	501 aa	Predicted RBP	18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	TRIM32	Q13049	653 aa		18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	ITPRIP	Q8IWB1	547 aa		18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	FTSJ3	Q8IY81	847 aa	Known RBP	18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	EAF2	Q96CJ1	260 aa	Predicted RBP	18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	P2RX7	Q99572	595 aa	Known RBP	18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	TRIM34	Q9BYJ4	488 aa		18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	TMOD4	Q9NZQ9	345 aa		18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	MORF4L1	Q9UBU8	362 aa		18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	NR2E3	Q9Y5X4	410 aa		18.87	■□□□□ 0.61
RFX2-223	ENST00000592883	HMGCR	P04035	888 aa		18.86	■□□□□ 0.61
RFX2-223	ENST00000592883	CYP7A1	P22680	504 aa		18.86	■□□□□ 0.61
RFX2-223	ENST00000592883	PAWR	Q96IZ0	340 aa	Known RBP	18.86	■□□□□ 0.61
RFX2-223	ENST00000592883	PRO3102	Q9H379	93 aa		18.86	■□□□□ 0.61
RFX2-223	ENST00000592883	ZBTB21	Q9ULJ3	1066 aa		18.86	■□□□□ 0.61
RFX2-223	ENST00000592883	NDUFB9	Q9Y6M9	179 aa		18.86	■□□□□ 0.61
RFX2-223	ENST00000592883	USP17L10	C9JJH3	530 aa		18.85	■□□□□ 0.61
RFX2-223	ENST00000592883	HOXA7	P31268	230 aa	Predicted RBP	18.85	■□□□□ 0.61
RFX2-223	ENST00000592883	MIGA1	Q8NAN2	632 aa		18.85	■□□□□ 0.61
RFX2-223	ENST00000592883	DIS3L	Q8TF46	1054 aa	Known RBP	18.85	■□□□□ 0.61
RFX2-223	ENST00000592883	TXNRD2	Q9NNW7	524 aa		18.85	■□□□□ 0.61
RFX2-223	ENST00000592883	SZT2	Q5T011	3432 aa		18.85	■□□□□ 0.61
RFX2-223	ENST00000592883	NAV1	Q8NEY1	1877 aa		18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	C19orf81	C9J6K1	198 aa		18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	EVI5	O60447	810 aa		18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	IDH1	O75874	414 aa	Known RBP	18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	HLA-DOA	P06340	250 aa		18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	CAPN2	P17655	700 aa		18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	CYP2B6	P20813	491 aa		18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	HERVK_113	P62684	666 aa		18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	TRIB2	Q92519	343 aa		18.84	■□□□□ 0.61
RFX2-223	ENST00000592883	RPTOR	Q8N122	1335 aa		18.83	■□□□□ 0.61
RFX2-223	ENST00000592883	IGSF3	O75054	1194 aa		18.83	■□□□□ 0.6
RFX2-223	ENST00000592883	MAGEB6	Q8N7X4	407 aa		18.83	■□□□□ 0.6
RFX2-223	ENST00000592883	ANTXR1	Q9H6X2	564 aa		18.83	■□□□□ 0.6
RFX2-223	ENST00000592883	GINM1	Q9NU53	330 aa		18.83	■□□□□ 0.6
RFX2-223	ENST00000592883	RANBP2	P49792	3224 aa	Known RBP	18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	FRMPD3	Q5JV73	1810 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	USP5	P45974	858 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883		Q3C1V9	767 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	CEP85	Q6P2H3	762 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	NECAB2	Q7Z6G3	386 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	GPRC5A	Q8NFJ5	357 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	HMX1	Q9NP08	348 aa	Predicted RBP	18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	EMILIN3	Q9NT22	766 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	RBPJL	Q9UBG7	517 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	EXOC6B	Q9Y2D4	811 aa		18.82	■□□□□ 0.6
RFX2-223	ENST00000592883	MYH8	P13535	1937 aa		18.81	■□□□□ 0.6
RFX2-223	ENST00000592883	GH2	P01242	217 aa		18.81	■□□□□ 0.6
RFX2-223	ENST00000592883	POTEE	Q6S8J3	1075 aa		18.81	■□□□□ 0.6
RFX2-223	ENST00000592883	MNX1	P50219	401 aa	Predicted RBP	18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	ERVK-9	P63128	1117 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	ERVK-24	P63145	666 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	TATDN1	Q6P1N9	297 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	USP17L2	Q6R6M4	530 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	AACS	Q86V21	672 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	ANKLE1	Q8NAG6	615 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	NUDT12	Q9BQG2	462 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	PAGR1	Q9BTK6	254 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	PORCN	Q9H237	461 aa		18.8	■□□□□ 0.6
RFX2-223	ENST00000592883	ZYX	Q15942	572 aa	Known RBP	18.79	■□□□□ 0.6
RFX2-223	ENST00000592883	STAP2	Q9UGK3	403 aa		18.79	■□□□□ 0.6
RFX2-223	ENST00000592883	SERPINB13	Q9UIV8	391 aa		18.79	■□□□□ 0.6
RFX2-223	ENST00000592883	PRKAR2A	P13861	404 aa	Known RBP	18.78	■□□□□ 0.6
RFX2-223	ENST00000592883	MAPK4	P31152	587 aa		18.78	■□□□□ 0.6
RFX2-223	ENST00000592883	MAP3K12	Q12852	859 aa		18.78	■□□□□ 0.6
RFX2-223	ENST00000592883	MAP3K21	Q5TCX8	1036 aa		18.78	■□□□□ 0.6
RFX2-223	ENST00000592883	GPR142	Q7Z601	462 aa		18.78	■□□□□ 0.6
RFX2-223	ENST00000592883	C7orf61	Q8IZ16	206 aa		18.78	■□□□□ 0.6
RFX2-223	ENST00000592883	PANK1	Q8TE04	598 aa		18.78	■□□□□ 0.6
RFX2-223	ENST00000592883	SOCS4	Q8WXH5	440 aa		18.78	■□□□□ 0.6
RFX2-223	ENST00000592883	XRCC5	P13010	732 aa	Known RBP	18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	PDE3A	Q14432	1141 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	RAB3GAP1	Q15042	981 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	CCL14	Q16627	93 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	CERS3	Q8IU89	383 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	CCAR1	Q8IX12	1150 aa	Known RBP	18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	MIER1	Q8N108	512 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	USP6NL	Q92738	828 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	C12orf42	Q96LP6	360 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	FEZ1	Q99689	392 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	NBPF3	Q9H094	633 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	EHD4	Q9H223	541 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	IL1RAPL2	Q9NP60	686 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	OGDHL	Q9ULD0	1010 aa		18.77	■□□□□ 0.6
RFX2-223	ENST00000592883	CNMD	O75829	334 aa		18.76	■□□□□ 0.59
RFX2-223	ENST00000592883	ZKSCAN1	P17029	563 aa	Predicted RBP	18.76	■□□□□ 0.59
RFX2-223	ENST00000592883	PLCD1	P51178	756 aa		18.76	■□□□□ 0.59
RFX2-223	ENST00000592883	CACNB2	Q08289	660 aa	Predicted RBP	18.76	■□□□□ 0.59
RFX2-223	ENST00000592883	ABCB5	Q2M3G0	1257 aa		18.76	■□□□□ 0.59
RFX2-223	ENST00000592883	CERKL	Q49MI3	558 aa	Predicted RBP	18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms