RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 GADL1Q6ZQY3 521 aa18.91■□□□□ 0.62
LIG3-215ENST00000592690 ATP8A2Q9NTI2 1148 aa18.91■□□□□ 0.62
LIG3-215ENST00000592690 ZBTB21Q9ULJ3 1066 aa18.91■□□□□ 0.62
LIG3-215ENST00000592690 SLC4A4Q9Y6R1 1079 aa18.91■□□□□ 0.62
LIG3-215ENST00000592690 CYP2D7A0A087X1C5 515 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 USP17L5A8MUK1 530 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 SMIM22K7EJ46 135 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 PDHXO00330 501 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 ASNSP08243 561 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 SHMT1P34896 483 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 GABPAQ06546 454 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 SPP2Q13103 211 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 CTU1Q7Z7A3 348 aaKnown RBP18.9■□□□□ 0.62
LIG3-215ENST00000592690 ZNF280CQ8ND82 737 aa18.9■□□□□ 0.62
LIG3-215ENST00000592690 STRBPQ96SI9 672 aaKnown RBP18.9■□□□□ 0.62
LIG3-215ENST00000592690 FASTKD5Q7L8L6 764 aaKnown RBP18.89■□□□□ 0.61
LIG3-215ENST00000592690 ABHD8Q96I13 439 aa18.89■□□□□ 0.61
LIG3-215ENST00000592690 SEC62Q99442 399 aaKnown RBP18.89■□□□□ 0.61
LIG3-215ENST00000592690 TBC1D2Q9BYX2 928 aa18.89■□□□□ 0.61
LIG3-215ENST00000592690 GPAA1O43292 621 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 TLR2O60603 784 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 GH2P01242 217 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 CAP1Q01518 475 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 LRRFIP1Q32MZ4 808 aaKnown RBP18.88■□□□□ 0.61
LIG3-215ENST00000592690 PLEKHM2Q8IWE5 1019 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 SLC44A5Q8NCS7 719 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 CD99L2Q8TCZ2 262 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 DYNLL2Q96FJ2 89 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 AS3MTQ9HBK9 375 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 ADGRA2Q96PE1 1338 aa18.88■□□□□ 0.61
LIG3-215ENST00000592690 GSG1L2A8MUP6 293 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 USP17L12C9JPN9 530 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 USP17L21D6R901 530 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 HMGCS2P54868 508 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 SP3Q02447 781 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 CERKLQ49MI3 558 aaPredicted RBP18.87■□□□□ 0.61
LIG3-215ENST00000592690 ZMYM1Q5SVZ6 1142 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 TREML2Q5T2D2 321 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 C12orf60Q5U649 245 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 EVI5LQ96CN4 794 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 WDR18Q9BV38 432 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 GINM1Q9NU53 330 aa18.87■□□□□ 0.61
LIG3-215ENST00000592690 GREB1LQ9C091 1923 aaPredicted RBP18.86■□□□□ 0.61
LIG3-215ENST00000592690 CYP2C8P10632 490 aa18.86■□□□□ 0.61
LIG3-215ENST00000592690 MTMR2Q13614 643 aa18.86■□□□□ 0.61
LIG3-215ENST00000592690 ABCB5Q2M3G0 1257 aa18.86■□□□□ 0.61
LIG3-215ENST00000592690 CTR9Q6PD62 1173 aa18.86■□□□□ 0.61
LIG3-215ENST00000592690 DDRGK1Q96HY6 314 aa18.86■□□□□ 0.61
LIG3-215ENST00000592690 EPB41L4AQ9HCS5 686 aaPredicted RBP18.86■□□□□ 0.61
LIG3-215ENST00000592690 AGTPBP1Q9UPW5 1226 aa18.86■□□□□ 0.61
LIG3-215ENST00000592690 SH3D19Q5HYK7 790 aa18.85■□□□□ 0.61
LIG3-215ENST00000592690 PROCA1Q8NCQ7 364 aaPredicted RBP18.85■□□□□ 0.61
LIG3-215ENST00000592690 ERO1AQ96HE7 468 aa18.85■□□□□ 0.61
LIG3-215ENST00000592690 PARK7Q99497 189 aaKnown RBP18.85■□□□□ 0.61
LIG3-215ENST00000592690 CPA4Q9UI42 421 aa18.85■□□□□ 0.61
LIG3-215ENST00000592690 GUCY1A2P33402 732 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 BACE1P56817 501 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 RAB3GAP1Q15042 981 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 C17orf99Q6UX52 265 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 AMOTL1Q8IY63 956 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 OSBPL3Q9H4L5 887 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 ARPP21Q9UBL0 812 aaPredicted RBP18.84■□□□□ 0.61
LIG3-215ENST00000592690 SWAP70Q9UH65 585 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 SLC45A1Q9Y2W3 748 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 TRIM17Q9Y577 477 aa18.84■□□□□ 0.61
LIG3-215ENST00000592690 TRIM6-TRIM34B2RNG4 842 aa18.83■□□□□ 0.6
LIG3-215ENST00000592690 PDE4AP27815 886 aa18.83■□□□□ 0.6
LIG3-215ENST00000592690 GIMAP6Q6P9H5 292 aa18.83■□□□□ 0.6
LIG3-215ENST00000592690 CCDC129Q6ZRS4 1044 aa18.83■□□□□ 0.6
LIG3-215ENST00000592690 C16orf86Q6ZW13 317 aa18.83■□□□□ 0.6
LIG3-215ENST00000592690 OTOP1Q7RTM1 612 aa18.83■□□□□ 0.6
LIG3-215ENST00000592690 CABP5Q9NP86 173 aa18.83■□□□□ 0.6
LIG3-215ENST00000592690 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
LIG3-215ENST00000592690 USP17L10C9JJH3 530 aa18.82■□□□□ 0.6
LIG3-215ENST00000592690 MPHOSPH10O00566 681 aaKnown RBP18.82■□□□□ 0.6
LIG3-215ENST00000592690 GNAT2P19087 354 aa18.82■□□□□ 0.6
LIG3-215ENST00000592690 CDK8P49336 464 aa18.82■□□□□ 0.6
LIG3-215ENST00000592690 SEPT2Q15019 361 aa18.82■□□□□ 0.6
LIG3-215ENST00000592690 SBK1Q52WX2 424 aa18.82■□□□□ 0.6
LIG3-215ENST00000592690 ARHGAP39Q9C0H5 1083 aa18.82■□□□□ 0.6
LIG3-215ENST00000592690 DOCK3Q8IZD9 2030 aa18.82■□□□□ 0.6
LIG3-215ENST00000592690 A0A0D9SFI3 127 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 C19orf81C9J6K1 198 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 FOXP2O15409 715 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 ECM2O94769 699 aaPredicted RBP18.81■□□□□ 0.6
LIG3-215ENST00000592690 APPP05067 770 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 BCRP11274 1271 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 AKR1B1P15121 316 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 TDO2P48775 406 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 LACTBP83111 547 aaPredicted RBP18.81■□□□□ 0.6
LIG3-215ENST00000592690 PKN2Q16513 984 aaKnown RBP18.81■□□□□ 0.6
LIG3-215ENST00000592690 ACER1Q8TDN7 264 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 RILPL2Q969X0 211 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 FAM227BQ96M60 508 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 TAOK2Q9UL54 1235 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 HTTP42858 3142 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 PARP14Q460N5 1801 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 ROBO3Q96MS0 1386 aa18.81■□□□□ 0.6
LIG3-215ENST00000592690 MINDY4BA8MYZ0 360 aa18.8■□□□□ 0.6
LIG3-215ENST00000592690 PATL2C9JE40 543 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms