RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ECM2O94769 699 aaPredicted RBP22.97■■□□□ 1.27
CCDC43-205ENST00000592333 AACSQ86V21 672 aa22.97■■□□□ 1.27
CCDC43-205ENST00000592333 PANK1Q8TE04 598 aa22.97■■□□□ 1.27
CCDC43-205ENST00000592333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.97■■□□□ 1.27
CCDC43-205ENST00000592333 SHISA4Q96DD7 197 aa22.97■■□□□ 1.27
CCDC43-205ENST00000592333 MORF4L1Q9UBU8 362 aa22.97■■□□□ 1.27
CCDC43-205ENST00000592333 EXOC6BQ9Y2D4 811 aa22.97■■□□□ 1.27
CCDC43-205ENST00000592333 USP17L10C9JJH3 530 aa22.96■■□□□ 1.27
CCDC43-205ENST00000592333 HABP4Q5JVS0 413 aaKnown RBP22.96■■□□□ 1.27
CCDC43-205ENST00000592333 TATDN1Q6P1N9 297 aa22.96■■□□□ 1.27
CCDC43-205ENST00000592333 UBE2Q1Q7Z7E8 422 aa22.96■■□□□ 1.27
CCDC43-205ENST00000592333 CLASRPQ8N2M8 674 aaKnown RBP22.96■■□□□ 1.27
CCDC43-205ENST00000592333 RHPN1Q8TCX5 695 aa22.96■■□□□ 1.27
CCDC43-205ENST00000592333 GTF3C2Q8WUA4 911 aaPredicted RBP22.96■■□□□ 1.27
CCDC43-205ENST00000592333 KIF1BPQ96EK5 621 aa22.96■■□□□ 1.27
CCDC43-205ENST00000592333 SGPL1O95470 568 aa22.95■■□□□ 1.26
CCDC43-205ENST00000592333 MTMR2Q13614 643 aa22.95■■□□□ 1.26
CCDC43-205ENST00000592333 TTC6Q86TZ1 520 aa22.95■■□□□ 1.26
CCDC43-205ENST00000592333 MAGEB6Q8N7X4 407 aa22.95■■□□□ 1.26
CCDC43-205ENST00000592333 U2AF1L4Q8WU68 220 aaKnown RBP22.95■■□□□ 1.26
CCDC43-205ENST00000592333 HTATIP2Q9BUP3 242 aa22.95■■□□□ 1.26
CCDC43-205ENST00000592333 TAOK2Q9UL54 1235 aa22.95■■□□□ 1.26
CCDC43-205ENST00000592333 ZBTB21Q9ULJ3 1066 aa22.95■■□□□ 1.26
CCDC43-205ENST00000592333 MYO5AQ9Y4I1 1855 aaKnown RBP22.95■■□□□ 1.26
CCDC43-205ENST00000592333 USP5P45974 858 aa22.94■■□□□ 1.26
CCDC43-205ENST00000592333 DYNLL1P63167 89 aaKnown RBP22.94■■□□□ 1.26
CCDC43-205ENST00000592333 IRX3P78415 501 aaPredicted RBP22.94■■□□□ 1.26
CCDC43-205ENST00000592333 ZBTB40Q9NUA8 1239 aa22.94■■□□□ 1.26
CCDC43-205ENST00000592333 SERPINB13Q9UIV8 391 aa22.94■■□□□ 1.26
CCDC43-205ENST00000592333 RAB11FIP3O75154 756 aa22.93■■□□□ 1.26
CCDC43-205ENST00000592333 INHAP05111 366 aa22.93■■□□□ 1.26
CCDC43-205ENST00000592333 UNC93B1Q9H1C4 597 aa22.93■■□□□ 1.26
CCDC43-205ENST00000592333 PAK6Q9NQU5 681 aaPredicted RBP22.93■■□□□ 1.26
CCDC43-205ENST00000592333 RIOK1Q9BRS2 568 aaKnown RBP22.92■■□□□ 1.26
CCDC43-205ENST00000592333 ANTXR1Q9H6X2 564 aa22.92■■□□□ 1.26
CCDC43-205ENST00000592333 JAG1P78504 1218 aa22.91■■□□□ 1.26
CCDC43-205ENST00000592333 USP17L2Q6R6M4 530 aa22.91■■□□□ 1.26
CCDC43-205ENST00000592333 MIGA1Q8NAN2 632 aa22.91■■□□□ 1.26
CCDC43-205ENST00000592333 SAP30BPQ9UHR5 308 aaKnown RBP22.91■■□□□ 1.26
CCDC43-205ENST00000592333 GJD2Q9UKL4 321 aa22.91■■□□□ 1.26
CCDC43-205ENST00000592333 ELNP15502 786 aa22.9■■□□□ 1.26
CCDC43-205ENST00000592333 USP14P54578 494 aa22.9■■□□□ 1.26
CCDC43-205ENST00000592333 GPRC5AQ8NFJ5 357 aa22.9■■□□□ 1.26
CCDC43-205ENST00000592333 C12orf42Q96LP6 360 aa22.9■■□□□ 1.26
CCDC43-205ENST00000592333 P2RX7Q99572 595 aaKnown RBP22.9■■□□□ 1.26
CCDC43-205ENST00000592333 IL1RAPL2Q9NP60 686 aa22.9■■□□□ 1.26
CCDC43-205ENST00000592333 MYH1P12882 1939 aa22.9■■□□□ 1.26
CCDC43-205ENST00000592333 GDF11O95390 407 aa22.89■■□□□ 1.25
CCDC43-205ENST00000592333 HMGCRP04035 888 aa22.89■■□□□ 1.25
CCDC43-205ENST00000592333 IFIT2P09913 472 aaKnown RBP22.89■■□□□ 1.25
CCDC43-205ENST00000592333 XRCC5P13010 732 aaKnown RBP22.89■■□□□ 1.25
CCDC43-205ENST00000592333 HERVK_113P62684 666 aa22.89■■□□□ 1.25
CCDC43-205ENST00000592333 CRISPLD2Q9H0B8 497 aa22.89■■□□□ 1.25
CCDC43-205ENST00000592333 MAGEB6P1A0A0J9YX57 407 aa22.88■■□□□ 1.25
CCDC43-205ENST00000592333 FARP2O94887 1054 aaPredicted RBP22.88■■□□□ 1.25
CCDC43-205ENST00000592333 GH2P01242 217 aa22.88■■□□□ 1.25
CCDC43-205ENST00000592333 MAPK4P31152 587 aa22.88■■□□□ 1.25
CCDC43-205ENST00000592333 SLC9C2Q5TAH2 1124 aa22.88■■□□□ 1.25
CCDC43-205ENST00000592333 TRMT44Q8IYL2 757 aaKnown RBP22.88■■□□□ 1.25
CCDC43-205ENST00000592333 SOCS4Q8WXH5 440 aa22.88■■□□□ 1.25
CCDC43-205ENST00000592333 DPF3Q92784 378 aa22.88■■□□□ 1.25
CCDC43-205ENST00000592333 CRNKL1Q9BZJ0 848 aaKnown RBP22.88■■□□□ 1.25
CCDC43-205ENST00000592333 EMILIN3Q9NT22 766 aa22.88■■□□□ 1.25
CCDC43-205ENST00000592333 DOCK3Q8IZD9 2030 aa22.87■■□□□ 1.25
CCDC43-205ENST00000592333 H0YGN5 161 aa22.87■■□□□ 1.25
CCDC43-205ENST00000592333 CERKLQ49MI3 558 aaPredicted RBP22.87■■□□□ 1.25
CCDC43-205ENST00000592333 ANKLE1Q8NAG6 615 aa22.87■■□□□ 1.25
CCDC43-205ENST00000592333 KIAA1683Q9H0B3 1180 aa22.87■■□□□ 1.25
CCDC43-205ENST00000592333 CABP5Q9NP86 173 aa22.87■■□□□ 1.25
CCDC43-205ENST00000592333 COG6Q9Y2V7 657 aa22.87■■□□□ 1.25
CCDC43-205ENST00000592333 NR2E3Q9Y5X4 410 aa22.87■■□□□ 1.25
CCDC43-205ENST00000592333 NDUFB9Q9Y6M9 179 aa22.87■■□□□ 1.25
CCDC43-205ENST00000592333 RPTORQ8N122 1335 aa22.86■■□□□ 1.25
CCDC43-205ENST00000592333 TFRCP02786 760 aaKnown RBP22.86■■□□□ 1.25
CCDC43-205ENST00000592333 PDE6AP16499 860 aa22.86■■□□□ 1.25
CCDC43-205ENST00000592333 PDE3AQ14432 1141 aa22.86■■□□□ 1.25
CCDC43-205ENST00000592333 ABCB5Q2M3G0 1257 aa22.86■■□□□ 1.25
CCDC43-205ENST00000592333 SIRT2Q8IXJ6 389 aa22.86■■□□□ 1.25
CCDC43-205ENST00000592333 DEFB118Q96PH6 123 aa22.86■■□□□ 1.25
CCDC43-205ENST00000592333 NUDT12Q9BQG2 462 aa22.86■■□□□ 1.25
CCDC43-205ENST00000592333 RBPJLQ9UBG7 517 aa22.86■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L15C9J2P7 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L13C9JLJ4 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L11C9JVI0 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L18D6R9N7 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L22D6RA61 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L17D6RBQ6 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L19D6RCP7 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L20D6RJB6 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 USP17L24Q0WX57 530 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 LBX2Q6XYB7 198 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.85■■□□□ 1.25
CCDC43-205ENST00000592333 HMX1Q9NP08 348 aaPredicted RBP22.85■■□□□ 1.25
CCDC43-205ENST00000592333 RCAN3Q9UKA8 241 aa22.85■■□□□ 1.25
CCDC43-205ENST00000592333 COLQQ9Y215 455 aaPredicted RBP22.85■■□□□ 1.25
CCDC43-205ENST00000592333 CEP290O15078 2479 aa22.84■■□□□ 1.25
CCDC43-205ENST00000592333 POLR3DP05423 398 aaPredicted RBP22.84■■□□□ 1.25
CCDC43-205ENST00000592333 ATP5JP18859 108 aa22.84■■□□□ 1.25
CCDC43-205ENST00000592333 ERVK-9P63128 1117 aa22.84■■□□□ 1.25
CCDC43-205ENST00000592333 ERVK-24P63145 666 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms