RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 ASCC2Q9H1I8 757 aaPredicted RBP22.34■■□□□ 1.17
CIRBP-237ENST00000592234 GINM1Q9NU53 330 aa22.34■■□□□ 1.17
CIRBP-237ENST00000592234 TMOD4Q9NZQ9 345 aa22.34■■□□□ 1.17
CIRBP-237ENST00000592234 TAOK2Q9UL54 1235 aa22.34■■□□□ 1.17
CIRBP-237ENST00000592234 GJA8P48165 433 aa22.33■■□□□ 1.17
CIRBP-237ENST00000592234 JAG1P78504 1218 aa22.33■■□□□ 1.17
CIRBP-237ENST00000592234 IRF5Q13568 498 aa22.33■■□□□ 1.17
CIRBP-237ENST00000592234 PXYLP1Q8TE99 480 aa22.33■■□□□ 1.17
CIRBP-237ENST00000592234 RCAN3Q9UKA8 241 aa22.33■■□□□ 1.17
CIRBP-237ENST00000592234 ELNP15502 786 aa22.32■■□□□ 1.16
CIRBP-237ENST00000592234 IRX3P78415 501 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-237ENST00000592234 TMED8Q6PL24 325 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-237ENST00000592234 UNC93B1Q9H1C4 597 aa22.32■■□□□ 1.16
CIRBP-237ENST00000592234 ZBTB21Q9ULJ3 1066 aa22.32■■□□□ 1.16
CIRBP-237ENST00000592234 DDX19BQ9UMR2 479 aa22.32■■□□□ 1.16
CIRBP-237ENST00000592234 C19orf81C9J6K1 198 aa22.31■■□□□ 1.16
CIRBP-237ENST00000592234 USP17L10C9JJH3 530 aa22.31■■□□□ 1.16
CIRBP-237ENST00000592234 APBB1O00213 710 aa22.31■■□□□ 1.16
CIRBP-237ENST00000592234 HMMRO75330 724 aa22.31■■□□□ 1.16
CIRBP-237ENST00000592234 INHAP05111 366 aa22.31■■□□□ 1.16
CIRBP-237ENST00000592234 SHROOM1Q2M3G4 852 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-237ENST00000592234 HABP4Q5JVS0 413 aaKnown RBP22.31■■□□□ 1.16
CIRBP-237ENST00000592234 RPAP2Q8IXW5 612 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-237ENST00000592234 CLASRPQ8N2M8 674 aaKnown RBP22.31■■□□□ 1.16
CIRBP-237ENST00000592234 COG6Q9Y2V7 657 aa22.31■■□□□ 1.16
CIRBP-237ENST00000592234 NAV1Q8NEY1 1877 aa22.3■■□□□ 1.16
CIRBP-237ENST00000592234 TTF1Q15361 905 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-237ENST00000592234 U2AF1L4Q8WU68 220 aaKnown RBP22.3■■□□□ 1.16
CIRBP-237ENST00000592234 KIF1BPQ96EK5 621 aa22.3■■□□□ 1.16
CIRBP-237ENST00000592234 HOXA7P31268 230 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-237ENST00000592234 BCL11AQ9H165 835 aa22.29■■□□□ 1.16
CIRBP-237ENST00000592234 CEP290O15078 2479 aa22.28■■□□□ 1.16
CIRBP-237ENST00000592234 IFIT2P09913 472 aaKnown RBP22.28■■□□□ 1.16
CIRBP-237ENST00000592234 TTC6Q86TZ1 520 aa22.28■■□□□ 1.16
CIRBP-237ENST00000592234 DPF3Q92784 378 aa22.28■■□□□ 1.16
CIRBP-237ENST00000592234 ZBTB40Q9NUA8 1239 aa22.28■■□□□ 1.16
CIRBP-237ENST00000592234 SERPINB13Q9UIV8 391 aa22.28■■□□□ 1.16
CIRBP-237ENST00000592234 PLXNB2O15031 1838 aa22.27■■□□□ 1.16
CIRBP-237ENST00000592234 SGPL1O95470 568 aa22.27■■□□□ 1.16
CIRBP-237ENST00000592234 GH2P01242 217 aa22.27■■□□□ 1.16
CIRBP-237ENST00000592234 DDX60LQ5H9U9 1706 aaKnown RBP22.27■■□□□ 1.16
CIRBP-237ENST00000592234 TATDN1Q6P1N9 297 aa22.27■■□□□ 1.16
CIRBP-237ENST00000592234 P2RX7Q99572 595 aaKnown RBP22.27■■□□□ 1.16
CIRBP-237ENST00000592234 EHD4Q9H223 541 aa22.27■■□□□ 1.16
CIRBP-237ENST00000592234 CHMP4BQ9H444 224 aaKnown RBP22.27■■□□□ 1.16
CIRBP-237ENST00000592234 MORF4L1Q9UBU8 362 aa22.27■■□□□ 1.16
CIRBP-237ENST00000592234 MAGEB6P1A0A0J9YX57 407 aa22.26■■□□□ 1.15
CIRBP-237ENST00000592234 HERVK_113P62684 666 aa22.26■■□□□ 1.15
CIRBP-237ENST00000592234 SLC9C2Q5TAH2 1124 aa22.26■■□□□ 1.15
CIRBP-237ENST00000592234 USP17L2Q6R6M4 530 aa22.26■■□□□ 1.15
CIRBP-237ENST00000592234 SIRT2Q8IXJ6 389 aa22.26■■□□□ 1.15
CIRBP-237ENST00000592234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.26■■□□□ 1.15
CIRBP-237ENST00000592234 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
CIRBP-237ENST00000592234 DNAJC2Q99543 621 aaKnown RBP22.26■■□□□ 1.15
CIRBP-237ENST00000592234 RIOK1Q9BRS2 568 aaKnown RBP22.26■■□□□ 1.15
CIRBP-237ENST00000592234 HTATIP2Q9BUP3 242 aa22.26■■□□□ 1.15
CIRBP-237ENST00000592234 PCDH10Q9P2E7 1040 aa22.26■■□□□ 1.15
CIRBP-237ENST00000592234 H0YGN5 161 aa22.25■■□□□ 1.15
CIRBP-237ENST00000592234 RAB11FIP3O75154 756 aa22.25■■□□□ 1.15
CIRBP-237ENST00000592234 FARP2O94887 1054 aaPredicted RBP22.25■■□□□ 1.15
CIRBP-237ENST00000592234 UBE2Q1Q7Z7E8 422 aa22.25■■□□□ 1.15
CIRBP-237ENST00000592234 DEFB118Q96PH6 123 aa22.25■■□□□ 1.15
CIRBP-237ENST00000592234 EMILIN3Q9NT22 766 aa22.25■■□□□ 1.15
CIRBP-237ENST00000592234 MYH8P13535 1937 aa22.25■■□□□ 1.15
CIRBP-237ENST00000592234 GOLIM4O00461 696 aa22.24■■□□□ 1.15
CIRBP-237ENST00000592234 TFRCP02786 760 aaKnown RBP22.24■■□□□ 1.15
CIRBP-237ENST00000592234 POLR3DP05423 398 aaPredicted RBP22.24■■□□□ 1.15
CIRBP-237ENST00000592234 PDE6AP16499 860 aa22.24■■□□□ 1.15
CIRBP-237ENST00000592234 RAB3GAP1Q15042 981 aa22.24■■□□□ 1.15
CIRBP-237ENST00000592234 CERKLQ49MI3 558 aaPredicted RBP22.24■■□□□ 1.15
CIRBP-237ENST00000592234 GPRC5AQ8NFJ5 357 aa22.24■■□□□ 1.15
CIRBP-237ENST00000592234 FEZ1Q99689 392 aa22.24■■□□□ 1.15
CIRBP-237ENST00000592234 CRNKL1Q9BZJ0 848 aaKnown RBP22.24■■□□□ 1.15
CIRBP-237ENST00000592234 GJD2Q9UKL4 321 aa22.24■■□□□ 1.15
CIRBP-237ENST00000592234 MYH7P12883 1935 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 PEX10O60683 326 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 HMGCRP04035 888 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 CAPN2P17655 700 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 ZYXQ15942 572 aaKnown RBP22.23■■□□□ 1.15
CIRBP-237ENST00000592234 ABCB5Q2M3G0 1257 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 C20orf194Q5TEA3 1177 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 GTF3C2Q8WUA4 911 aaPredicted RBP22.23■■□□□ 1.15
CIRBP-237ENST00000592234 TXNRD2Q9NNW7 524 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 CABP5Q9NP86 173 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 PAK6Q9NQU5 681 aaPredicted RBP22.23■■□□□ 1.15
CIRBP-237ENST00000592234 COLQQ9Y215 455 aaPredicted RBP22.23■■□□□ 1.15
CIRBP-237ENST00000592234 ZNF532Q9HCE3 1301 aa22.23■■□□□ 1.15
CIRBP-237ENST00000592234 PLCD1P51178 756 aa22.22■■□□□ 1.15
CIRBP-237ENST00000592234 SHMT1P34896 483 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 USP14P54578 494 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 ERVK-9P63128 1117 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 ERVK-24P63145 666 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 CCAR1Q8IX12 1150 aaKnown RBP22.21■■□□□ 1.15
CIRBP-237ENST00000592234 C12orf42Q96LP6 360 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 NUDT12Q9BQG2 462 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 PAGR1Q9BTK6 254 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.21■■□□□ 1.154e-7■■■■□ 21.9
CIRBP-237ENST00000592234 MCM9Q9NXL9 1143 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 RBPJLQ9UBG7 517 aa22.21■■□□□ 1.15
CIRBP-237ENST00000592234 BAZ2AQ9UIF9 1905 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms