RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
VMP1-214ENST00000592106 TGFBRAP1Q8WUH2 860 aa12.37□□□□□ -0.43
VMP1-214ENST00000592106 HTATIP2Q9BUP3 242 aa12.37□□□□□ -0.43
VMP1-214ENST00000592106 RNF208Q9H0X6 261 aa12.37□□□□□ -0.43
VMP1-214ENST00000592106 TMOD4Q9NZQ9 345 aa12.37□□□□□ -0.43
VMP1-214ENST00000592106 KIAA0100Q14667 2235 aaKnown RBP12.36□□□□□ -0.43
VMP1-214ENST00000592106 ADCY3O60266 1144 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 IDH1O75874 414 aaKnown RBP12.36□□□□□ -0.43
VMP1-214ENST00000592106 GJB1P08034 283 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 CCL5P13501 91 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 HMGCS2P54868 508 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 IRX3P78415 501 aaPredicted RBP12.36□□□□□ -0.43
VMP1-214ENST00000592106 MAP3K12Q12852 859 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 IRF5Q13568 498 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 MTFR1Q15390 333 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 SH3D19Q5HYK7 790 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
VMP1-214ENST00000592106 ANKRD13CQ8N6S4 541 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.36□□□□□ -0.43
VMP1-214ENST00000592106 DBNLQ9UJU6 430 aaKnown RBP12.36□□□□□ -0.43
VMP1-214ENST00000592106 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 FOCADQ5VW36 1801 aa12.36□□□□□ -0.43
VMP1-214ENST00000592106 RLBP1P12271 317 aa12.35□□□□□ -0.43
VMP1-214ENST00000592106 CYP7A1P22680 504 aa12.35□□□□□ -0.43
VMP1-214ENST00000592106 USP5P45974 858 aa12.35□□□□□ -0.43
VMP1-214ENST00000592106 GJA8P48165 433 aa12.35□□□□□ -0.43
VMP1-214ENST00000592106 FLT3LGP49771 235 aa12.35□□□□□ -0.43
VMP1-214ENST00000592106 GTF3C2Q8WUA4 911 aaPredicted RBP12.35□□□□□ -0.43
VMP1-214ENST00000592106 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
VMP1-214ENST00000592106 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
VMP1-214ENST00000592106 CHMP4BQ9H444 224 aaKnown RBP12.35□□□□□ -0.43
VMP1-214ENST00000592106 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
VMP1-214ENST00000592106 PIH1D3Q9NQM4 214 aaKnown RBP12.35□□□□□ -0.43
VMP1-214ENST00000592106 GABRQQ9UN88 632 aa12.35□□□□□ -0.43
VMP1-214ENST00000592106 TNRC18O15417 2968 aaPredicted RBP12.34□□□□□ -0.43
VMP1-214ENST00000592106 C19orf81C9J6K1 198 aa12.34□□□□□ -0.43
VMP1-214ENST00000592106 HMMRO75330 724 aa12.34□□□□□ -0.43
VMP1-214ENST00000592106 MTMR2Q13614 643 aa12.34□□□□□ -0.43
VMP1-214ENST00000592106 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
VMP1-214ENST00000592106 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
VMP1-214ENST00000592106 AACSQ86V21 672 aa12.34□□□□□ -0.43
VMP1-214ENST00000592106 EAF2Q96CJ1 260 aaPredicted RBP12.34□□□□□ -0.43
VMP1-214ENST00000592106 SHISA4Q96DD7 197 aa12.34□□□□□ -0.43
VMP1-214ENST00000592106 TLR7Q9NYK1 1049 aaKnown RBP12.34□□□□□ -0.43
VMP1-214ENST00000592106 EXOC6BQ9Y2D4 811 aa12.34□□□□□ -0.43
VMP1-214ENST00000592106 SIPA1L1O43166 1804 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 USP17L10C9JJH3 530 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 INHAP05111 366 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 BACE1P56817 501 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 ADGRA1Q86SQ6 560 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 TTC6Q86TZ1 520 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
VMP1-214ENST00000592106 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.44
VMP1-214ENST00000592106 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.44
VMP1-214ENST00000592106 DPF3Q92784 378 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 ASCC2Q9H1I8 757 aaPredicted RBP12.33□□□□□ -0.44
VMP1-214ENST00000592106 SAP30BPQ9UHR5 308 aaKnown RBP12.33□□□□□ -0.44
VMP1-214ENST00000592106 PALD1Q9ULE6 856 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 ZBTB21Q9ULJ3 1066 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 CDK5RAP2Q96SN8 1893 aa12.33□□□□□ -0.44
VMP1-214ENST00000592106 FARP2O94887 1054 aaPredicted RBP12.32□□□□□ -0.44
VMP1-214ENST00000592106 GDF11O95390 407 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 ELNP15502 786 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
VMP1-214ENST00000592106 MIGA1Q8NAN2 632 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 KIF1BPQ96EK5 621 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 FEZ1Q99689 392 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 DDX19BQ9UMR2 479 aa12.32□□□□□ -0.44
VMP1-214ENST00000592106 SGPL1O95470 568 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 HMGCRP04035 888 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
VMP1-214ENST00000592106 HOXA7P31268 230 aaPredicted RBP12.31□□□□□ -0.44
VMP1-214ENST00000592106 PDE3AQ14432 1141 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 RRP1BQ14684 758 aaKnown RBP12.31□□□□□ -0.44
VMP1-214ENST00000592106 USP17L2Q6R6M4 530 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
VMP1-214ENST00000592106 RPAP2Q8IXW5 612 aaPredicted RBP12.31□□□□□ -0.44
VMP1-214ENST00000592106 RHPN1Q8TCX5 695 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 PANK1Q8TE04 598 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 SOCS4Q8WXH5 440 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 EHD4Q9H223 541 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 CWC22Q9HCG8 908 aaKnown RBP12.31□□□□□ -0.44
VMP1-214ENST00000592106 CABP5Q9NP86 173 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 SERPINB13Q9UIV8 391 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 NR2E3Q9Y5X4 410 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 HTTP42858 3142 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 MYH1P12882 1939 aa12.31□□□□□ -0.44
VMP1-214ENST00000592106 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
VMP1-214ENST00000592106 RIOK3O14730 519 aaKnown RBP12.3□□□□□ -0.44
VMP1-214ENST00000592106 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
VMP1-214ENST00000592106 TFRCP02786 760 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms