RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 STK32BQ9NY57 414 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 CEP131Q9UPN4 1083 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 NRXN2Q9P2S2 1712 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 RGPD3A6NKT7 1758 aaPredicted RBP12.02□□□□□ -0.49
VPS25-206ENST00000591584 RGPD4Q7Z3J3 1758 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.49
VPS25-206ENST00000591584 TCHHQ07283 1943 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 G3V3G9 751 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 KINO60870 393 aaKnown RBP12.01□□□□□ -0.49
VPS25-206ENST00000591584 BMP15O95972 392 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 MMP1P03956 469 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 LIG1P18858 919 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 RXRAP19793 462 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 CMA1P23946 247 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 SLC15A2Q16348 729 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 SH3RF3Q8TEJ3 882 aaPredicted RBP12.01□□□□□ -0.49
VPS25-206ENST00000591584 PHKBQ93100 1093 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 PCDHA7Q9UN72 937 aa12.01□□□□□ -0.49
VPS25-206ENST00000591584 MYH13Q9UKX3 1938 aa12□□□□□ -0.49
VPS25-206ENST00000591584 SMARCA1P28370 1054 aa12□□□□□ -0.49
VPS25-206ENST00000591584 FOSBP53539 338 aa12□□□□□ -0.49
VPS25-206ENST00000591584 HDLBPQ00341 1268 aaKnown RBP12□□□□□ -0.49
VPS25-206ENST00000591584 CEBPZQ03701 1054 aaKnown RBP12□□□□□ -0.49
VPS25-206ENST00000591584 OTUD7BQ6GQQ9 843 aa12□□□□□ -0.49
VPS25-206ENST00000591584 HHIPL2Q6UWX4 724 aa12□□□□□ -0.49
VPS25-206ENST00000591584 RAB11FIP4Q86YS3 637 aa12□□□□□ -0.49
VPS25-206ENST00000591584 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
VPS25-206ENST00000591584 CCDC144CPQ8IYA2 1237 aa12□□□□□ -0.49
VPS25-206ENST00000591584 ELOA2Q8IYF1 753 aaPredicted RBP12□□□□□ -0.49
VPS25-206ENST00000591584 TEX11Q8IYF3 940 aa12□□□□□ -0.49
VPS25-206ENST00000591584 SUPT20HQ8NEM7 779 aa12□□□□□ -0.49
VPS25-206ENST00000591584 ENGASEQ8NFI3 743 aa12□□□□□ -0.49
VPS25-206ENST00000591584 TGFBRAP1Q8WUH2 860 aa12□□□□□ -0.49
VPS25-206ENST00000591584 TIGD1Q96MW7 591 aa12□□□□□ -0.49
VPS25-206ENST00000591584 MYL10Q9BUA6 226 aa12□□□□□ -0.49
VPS25-206ENST00000591584 KAT14Q9H8E8 782 aa12□□□□□ -0.49
VPS25-206ENST00000591584 LRRC37AA6NMS7 1700 aa12□□□□□ -0.49
VPS25-206ENST00000591584 CYP2D7A0A087X1C5 515 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 FAM237AA0A1B0GTK4 181 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 NR1I2O75469 434 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 TSPY3P0CV98 308 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 TSPY8P0CW00 308 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 GTF2IP78347 998 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 TFAP4Q01664 338 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 DIXDC1Q155Q3 683 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 C16orf86Q6ZW13 317 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 C2CD5Q86YS7 1000 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 FAM200AQ8TCP9 573 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 CAMKK2Q96RR4 588 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 SH3GLB2Q9NR46 395 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 CHD4Q14839 1912 aa11.99□□□□□ -0.49
VPS25-206ENST00000591584 MYO3BQ8WXR4 1341 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 KIF28PB7ZC32 967 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 CUTAO60888 179 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 PRDM1O75626 825 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 RHBDL3P58872 404 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 FUT2Q10981 343 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 SNW1Q13573 536 aaKnown RBP11.98□□□□□ -0.49
VPS25-206ENST00000591584 GALNT17Q6IS24 598 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 DIS3L2Q8IYB7 885 aaKnown RBP11.98□□□□□ -0.49
VPS25-206ENST00000591584 STK11IPQ8N1F8 1099 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 NEDD1Q8NHV4 660 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 ZNF622Q969S3 477 aaKnown RBP eCLIP11.98□□□□□ -0.49
VPS25-206ENST00000591584 SWAP70Q9UH65 585 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 CLIC4Q9Y696 253 aa11.98□□□□□ -0.49
VPS25-206ENST00000591584 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 TPM3P06753 285 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 CYP2D6P10635 497 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 CALML3P27482 149 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 KRT2P35908 639 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 TRAPPC10P48553 1259 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 CDK8P49336 464 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 TYRO3Q06418 890 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 SF3B2Q13435 895 aaKnown RBP11.97□□□□□ -0.49
VPS25-206ENST00000591584 FAM47AQ5JRC9 791 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 STRIP1Q5VSL9 837 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 FMR1NBQ8N0W7 255 aaPredicted RBP11.97□□□□□ -0.49
VPS25-206ENST00000591584 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
VPS25-206ENST00000591584 RNF214Q8ND24 703 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 GPR101Q96P66 508 aaPredicted RBP11.97□□□□□ -0.49
VPS25-206ENST00000591584 CCDC39Q9UFE4 941 aa11.97□□□□□ -0.49
VPS25-206ENST00000591584 NOL7Q9UMY1 257 aaKnown RBP11.97□□□□□ -0.49
VPS25-206ENST00000591584 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
VPS25-206ENST00000591584 FLT1P17948 1338 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 BTBD18B2RXH4 712 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 RIMBP2O15034 1052 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 NOVP48745 357 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 GRM4Q14833 912 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 PTPAQ15257 358 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 GRIK5Q16478 980 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 CAMK4Q16566 473 aa11.96□□□□□ -0.49
VPS25-206ENST00000591584 AXDND1Q5T1B0 1012 aaPredicted RBP11.96□□□□□ -0.49
VPS25-206ENST00000591584 RCSD1Q6JBY9 416 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms