RNA–Protein interactions for RNA: ENST00000591574.5

CYTH1-216, Transcript of cytohesin 1, humanhuman

TSL 3

Gene CYTH1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-216ENST00000591574 RAB11FIP3O75154 756 aa29.57■■■□□ 2.32
CYTH1-216ENST00000591574 SLC34A2O95436 690 aa29.57■■■□□ 2.32
CYTH1-216ENST00000591574 MTMR2Q13614 643 aa29.57■■■□□ 2.32
CYTH1-216ENST00000591574 BACE1P56817 501 aa29.56■■■□□ 2.32
CYTH1-216ENST00000591574 FAM110CQ1W6H9 321 aa29.56■■■□□ 2.32
CYTH1-216ENST00000591574 SHROOM1Q2M3G4 852 aaPredicted RBP29.56■■■□□ 2.32
CYTH1-216ENST00000591574 SLAIN1Q8ND83 568 aa29.56■■■□□ 2.32
CYTH1-216ENST00000591574 ASCC2Q9H1I8 757 aaPredicted RBP29.56■■■□□ 2.32
CYTH1-216ENST00000591574 TMOD4Q9NZQ9 345 aa29.56■■■□□ 2.32
CYTH1-216ENST00000591574 ZBTB21Q9ULJ3 1066 aa29.56■■■□□ 2.32
CYTH1-216ENST00000591574 GCLCP48506 637 aaPredicted RBP29.55■■■□□ 2.32
CYTH1-216ENST00000591574 FLT3LGP49771 235 aa29.55■■■□□ 2.32
CYTH1-216ENST00000591574 UBXN2AP68543 259 aa29.55■■■□□ 2.32
CYTH1-216ENST00000591574 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.55■■■□□ 2.32
CYTH1-216ENST00000591574 DNAJC2Q99543 621 aaKnown RBP29.55■■■□□ 2.32
CYTH1-216ENST00000591574 SLC9C2Q5TAH2 1124 aa29.54■■■□□ 2.32
CYTH1-216ENST00000591574 MAGEB6P1A0A0J9YX57 407 aa29.53■■■□□ 2.32
CYTH1-216ENST00000591574 C19orf81C9J6K1 198 aa29.53■■■□□ 2.32
CYTH1-216ENST00000591574 USP17L10C9JJH3 530 aa29.53■■■□□ 2.32
CYTH1-216ENST00000591574 GOLIM4O00461 696 aa29.53■■■□□ 2.32
CYTH1-216ENST00000591574 ADCY3O60266 1144 aa29.53■■■□□ 2.32
CYTH1-216ENST00000591574 COA7Q96BR5 231 aa29.53■■■□□ 2.32
CYTH1-216ENST00000591574 RIOK1Q9BRS2 568 aaKnown RBP29.53■■■□□ 2.32
CYTH1-216ENST00000591574 SERPINB13Q9UIV8 391 aa29.53■■■□□ 2.32
CYTH1-216ENST00000591574 CCL5P13501 91 aa29.52■■■□□ 2.32
CYTH1-216ENST00000591574 PDE6AP16499 860 aa29.52■■■□□ 2.32
CYTH1-216ENST00000591574 IRX3P78415 501 aaPredicted RBP29.52■■■□□ 2.32
CYTH1-216ENST00000591574 C20orf194Q5TEA3 1177 aa29.52■■■□□ 2.32
CYTH1-216ENST00000591574 TTC6Q86TZ1 520 aa29.52■■■□□ 2.32
CYTH1-216ENST00000591574 DOCK3Q8IZD9 2030 aa29.52■■■□□ 2.32
CYTH1-216ENST00000591574 PDE3AQ14432 1141 aa29.51■■■□□ 2.31
CYTH1-216ENST00000591574 RNF208Q9H0X6 261 aa29.51■■■□□ 2.31
CYTH1-216ENST00000591574 EHD4Q9H223 541 aa29.51■■■□□ 2.31
CYTH1-216ENST00000591574 GH2P01242 217 aa29.5■■■□□ 2.31
CYTH1-216ENST00000591574 IRF5Q13568 498 aa29.5■■■□□ 2.31
CYTH1-216ENST00000591574 TATDN1Q6P1N9 297 aa29.5■■■□□ 2.31
CYTH1-216ENST00000591574 NKX2-3Q8TAU0 364 aa29.5■■■□□ 2.31
CYTH1-216ENST00000591574 TAOK2Q9UL54 1235 aa29.5■■■□□ 2.31
CYTH1-216ENST00000591574 ZNF532Q9HCE3 1301 aa29.49■■■□□ 2.31
CYTH1-216ENST00000591574 ELNP15502 786 aa29.49■■■□□ 2.31
CYTH1-216ENST00000591574 PXYLP1Q8TE99 480 aa29.49■■■□□ 2.31
CYTH1-216ENST00000591574 CRNKL1Q9BZJ0 848 aaKnown RBP29.49■■■□□ 2.31
CYTH1-216ENST00000591574 GJB1P08034 283 aa29.48■■■□□ 2.31
CYTH1-216ENST00000591574 HOXA7P31268 230 aaPredicted RBP29.48■■■□□ 2.31
CYTH1-216ENST00000591574 SHISA4Q96DD7 197 aa29.48■■■□□ 2.31
CYTH1-216ENST00000591574 EDC3Q96F86 508 aaKnown RBP29.48■■■□□ 2.31
CYTH1-216ENST00000591574 POLR3DP05423 398 aaPredicted RBP29.47■■■□□ 2.31
CYTH1-216ENST00000591574 CERKLQ49MI3 558 aaPredicted RBP29.47■■■□□ 2.31
CYTH1-216ENST00000591574 P2RX7Q99572 595 aaKnown RBP29.47■■■□□ 2.31
CYTH1-216ENST00000591574 BOLA2Q9H3K6 86 aa29.47■■■□□ 2.31
CYTH1-216ENST00000591574 PAG1Q9NWQ8 432 aa29.47■■■□□ 2.31
CYTH1-216ENST00000591574 INHAP05111 366 aa29.46■■■□□ 2.31
CYTH1-216ENST00000591574 GJA8P48165 433 aa29.46■■■□□ 2.31
CYTH1-216ENST00000591574 PLCD1P51178 756 aa29.46■■■□□ 2.31
CYTH1-216ENST00000591574 USP17L2Q6R6M4 530 aa29.46■■■□□ 2.31
CYTH1-216ENST00000591574 GCC1Q96CN9 775 aa29.46■■■□□ 2.31
CYTH1-216ENST00000591574 UNC93B1Q9H1C4 597 aa29.46■■■□□ 2.31
CYTH1-216ENST00000591574 MORF4L1Q9UBU8 362 aa29.46■■■□□ 2.31
CYTH1-216ENST00000591574 NAV1Q8NEY1 1877 aa29.46■■■□□ 2.31
CYTH1-216ENST00000591574 TCRBV5S4A2TA0A5A2 114 aa29.45■■■□□ 2.31
CYTH1-216ENST00000591574 ATP5JP18859 108 aa29.45■■■□□ 2.31
CYTH1-216ENST00000591574 ABCB5Q2M3G0 1257 aa29.45■■■□□ 2.31
CYTH1-216ENST00000591574 FEZ1Q99689 392 aa29.45■■■□□ 2.31
CYTH1-216ENST00000591574 EMILIN3Q9NT22 766 aa29.45■■■□□ 2.31
CYTH1-216ENST00000591574 HERVK_113P62684 666 aa29.44■■■□□ 2.3
CYTH1-216ENST00000591574 RAB3GAP1Q15042 981 aa29.44■■■□□ 2.3
CYTH1-216ENST00000591574 LRRCC1Q9C099 1032 aa29.44■■■□□ 2.3
CYTH1-216ENST00000591574 CABP5Q9NP86 173 aa29.44■■■□□ 2.3
CYTH1-216ENST00000591574 MCM9Q9NXL9 1143 aa29.44■■■□□ 2.3
CYTH1-216ENST00000591574 DDX60LQ5H9U9 1706 aaKnown RBP29.44■■■□□ 2.3
CYTH1-216ENST00000591574 SHMT1P34896 483 aa29.43■■■□□ 2.3
CYTH1-216ENST00000591574 ZYXQ15942 572 aaKnown RBP29.43■■■□□ 2.3
CYTH1-216ENST00000591574 LCORLQ8N3X6 602 aa29.43■■■□□ 2.3
CYTH1-216ENST00000591574 GPRC5AQ8NFJ5 357 aa29.42■■■□□ 2.3
CYTH1-216ENST00000591574 U2AF1L4Q8WU68 220 aaKnown RBP29.42■■■□□ 2.3
CYTH1-216ENST00000591574 SDR42E1Q8WUS8 393 aa29.42■■■□□ 2.3
CYTH1-216ENST00000591574 HAUS7Q99871 368 aa29.42■■■□□ 2.3
CYTH1-216ENST00000591574 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.41■■■□□ 2.32e-6■■■□□ 16.2
CYTH1-216ENST00000591574 ARMT1Q9H993 441 aa29.41■■■□□ 2.3
CYTH1-216ENST00000591574 TXNRD2Q9NNW7 524 aa29.41■■■□□ 2.3
CYTH1-216ENST00000591574 DCP1AQ9NPI6 582 aaPredicted RBP29.41■■■□□ 2.3
CYTH1-216ENST00000591574 SMARCA5O60264 1052 aaPredicted RBP29.4■■■□□ 2.3
CYTH1-216ENST00000591574 PEX10O60683 326 aa29.4■■■□□ 2.3
CYTH1-216ENST00000591574 ADD2P35612 726 aa29.4■■■□□ 2.3
CYTH1-216ENST00000591574 USP14P54578 494 aa29.4■■■□□ 2.3
CYTH1-216ENST00000591574 GTF3C2Q8WUA4 911 aaPredicted RBP29.4■■■□□ 2.3
CYTH1-216ENST00000591574 C12orf42Q96LP6 360 aa29.4■■■□□ 2.3
CYTH1-216ENST00000591574 GJD2Q9UKL4 321 aa29.4■■■□□ 2.3
CYTH1-216ENST00000591574 SGPL1O95470 568 aa29.39■■■□□ 2.3
CYTH1-216ENST00000591574 GABPAQ06546 454 aa29.39■■■□□ 2.3
CYTH1-216ENST00000591574 RBPJLQ9UBG7 517 aa29.39■■■□□ 2.3
CYTH1-216ENST00000591574 MBD4O95243 580 aa29.38■■■□□ 2.29
CYTH1-216ENST00000591574 EVX2Q03828 476 aa29.38■■■□□ 2.29
CYTH1-216ENST00000591574 SLFNL1Q499Z3 407 aa29.38■■■□□ 2.29
CYTH1-216ENST00000591574 ACER1Q8TDN7 264 aa29.38■■■□□ 2.29
CYTH1-216ENST00000591574 PAGR1Q9BTK6 254 aa29.38■■■□□ 2.29
CYTH1-216ENST00000591574 KIAA1683Q9H0B3 1180 aa29.38■■■□□ 2.29
CYTH1-216ENST00000591574 CEP290O15078 2479 aa29.38■■■□□ 2.29
CYTH1-216ENST00000591574 USP17L15C9J2P7 530 aa29.37■■■□□ 2.29
CYTH1-216ENST00000591574 USP17L13C9JLJ4 530 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms