RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 TNPO2O14787 897 aaKnown RBP21.79■■□□□ 1.08
VAT1-208ENST00000590924 CYP7A1P22680 504 aa21.79■■□□□ 1.08
VAT1-208ENST00000590924 UBXN2AP68543 259 aa21.79■■□□□ 1.08
VAT1-208ENST00000590924 PABPC4Q13310 644 aaKnown RBP eCLIP21.79■■□□□ 1.086e-8■■■■□ 26.7
VAT1-208ENST00000590924 CERS3Q8IU89 383 aa21.79■■□□□ 1.08
VAT1-208ENST00000590924 SMC5Q8IY18 1101 aa21.79■■□□□ 1.08
VAT1-208ENST00000590924 ANKRD13CQ8N6S4 541 aa21.79■■□□□ 1.08
VAT1-208ENST00000590924 NKX2-3Q8TAU0 364 aa21.79■■□□□ 1.08
VAT1-208ENST00000590924 WDR18Q9BV38 432 aa21.79■■□□□ 1.08
VAT1-208ENST00000590924 PALD1Q9ULE6 856 aa21.79■■□□□ 1.08
VAT1-208ENST00000590924 IDH1O75874 414 aaKnown RBP21.78■■□□□ 1.08
VAT1-208ENST00000590924 IGHDP01880 384 aa21.78■■□□□ 1.08
VAT1-208ENST00000590924 GJB1P08034 283 aa21.78■■□□□ 1.08
VAT1-208ENST00000590924 CCL5P13501 91 aa21.78■■□□□ 1.08
VAT1-208ENST00000590924 GCLCP48506 637 aaPredicted RBP21.78■■□□□ 1.08
VAT1-208ENST00000590924 FLT3LGP49771 235 aa21.78■■□□□ 1.08
VAT1-208ENST00000590924 IRF5Q13568 498 aa21.78■■□□□ 1.08
VAT1-208ENST00000590924 TMED8Q6PL24 325 aaPredicted RBP21.78■■□□□ 1.08
VAT1-208ENST00000590924 GINM1Q9NU53 330 aa21.78■■□□□ 1.08
VAT1-208ENST00000590924 ADCY3O60266 1144 aa21.77■■□□□ 1.08
VAT1-208ENST00000590924 GJA8P48165 433 aa21.77■■□□□ 1.08
VAT1-208ENST00000590924 DYNLL1P63167 89 aaKnown RBP21.77■■□□□ 1.08
VAT1-208ENST00000590924 CRACR2BQ8N4Y2 399 aaPredicted RBP21.77■■□□□ 1.08
VAT1-208ENST00000590924 PXYLP1Q8TE99 480 aa21.77■■□□□ 1.08
VAT1-208ENST00000590924 TRIM34Q9BYJ4 488 aa21.77■■□□□ 1.08
VAT1-208ENST00000590924 BIN2Q9UBW5 565 aaPredicted RBP21.77■■□□□ 1.08
VAT1-208ENST00000590924 APBB1O00213 710 aa21.76■■□□□ 1.07
VAT1-208ENST00000590924 HLA-DOAP06340 250 aa21.76■■□□□ 1.07
VAT1-208ENST00000590924 AACSQ86V21 672 aa21.76■■□□□ 1.07
VAT1-208ENST00000590924 COA7Q96BR5 231 aa21.76■■□□□ 1.07
VAT1-208ENST00000590924 RNF208Q9H0X6 261 aa21.76■■□□□ 1.07
VAT1-208ENST00000590924 ASCC2Q9H1I8 757 aaPredicted RBP21.76■■□□□ 1.07
VAT1-208ENST00000590924 IL1RAPL2Q9NP60 686 aa21.76■■□□□ 1.07
VAT1-208ENST00000590924 BACE1P56817 501 aa21.75■■□□□ 1.07
VAT1-208ENST00000590924 JAG1P78504 1218 aa21.75■■□□□ 1.07
VAT1-208ENST00000590924 MAP3K12Q12852 859 aa21.75■■□□□ 1.07
VAT1-208ENST00000590924 MTMR2Q13614 643 aa21.75■■□□□ 1.07
VAT1-208ENST00000590924 MAGEB6Q8N7X4 407 aa21.75■■□□□ 1.07
VAT1-208ENST00000590924 ANTXR1Q9H6X2 564 aa21.75■■□□□ 1.07
VAT1-208ENST00000590924 SAP30BPQ9UHR5 308 aaKnown RBP21.75■■□□□ 1.07
VAT1-208ENST00000590924 NDUFB9Q9Y6M9 179 aa21.75■■□□□ 1.07
VAT1-208ENST00000590924 C19orf81C9J6K1 198 aa21.74■■□□□ 1.07
VAT1-208ENST00000590924 MIGA1Q8NAN2 632 aa21.74■■□□□ 1.07
VAT1-208ENST00000590924 PCDH10Q9P2E7 1040 aa21.74■■□□□ 1.07
VAT1-208ENST00000590924 ZBTB47Q9UFB7 747 aaPredicted RBP21.74■■□□□ 1.07
VAT1-208ENST00000590924 ZBTB21Q9ULJ3 1066 aa21.74■■□□□ 1.07
VAT1-208ENST00000590924 ALPK3Q96L96 1907 aa21.73■■□□□ 1.07
VAT1-208ENST00000590924 BAZ2AQ9UIF9 1905 aaKnown RBP21.73■■□□□ 1.07
VAT1-208ENST00000590924 GDF11O95390 407 aa21.73■■□□□ 1.07
VAT1-208ENST00000590924 IFIT2P09913 472 aaKnown RBP21.73■■□□□ 1.07
VAT1-208ENST00000590924 ELNP15502 786 aa21.73■■□□□ 1.07
VAT1-208ENST00000590924 HOXA7P31268 230 aaPredicted RBP21.73■■□□□ 1.07
VAT1-208ENST00000590924 HABP4Q5JVS0 413 aaKnown RBP21.73■■□□□ 1.07
VAT1-208ENST00000590924 UBE2Q1Q7Z7E8 422 aa21.73■■□□□ 1.07
VAT1-208ENST00000590924 UNC93B1Q9H1C4 597 aa21.73■■□□□ 1.07
VAT1-208ENST00000590924 TMOD4Q9NZQ9 345 aa21.73■■□□□ 1.07
VAT1-208ENST00000590924 USP17L10C9JJH3 530 aa21.72■■□□□ 1.07
VAT1-208ENST00000590924 INHAP05111 366 aa21.72■■□□□ 1.07
VAT1-208ENST00000590924 USP5P45974 858 aa21.72■■□□□ 1.07
VAT1-208ENST00000590924 SHROOM1Q2M3G4 852 aaPredicted RBP21.72■■□□□ 1.07
VAT1-208ENST00000590924 ANKRD45Q5TZF3 282 aa21.72■■□□□ 1.07
VAT1-208ENST00000590924 EHD4Q9H223 541 aa21.72■■□□□ 1.07
VAT1-208ENST00000590924 MORF4L1Q9UBU8 362 aa21.72■■□□□ 1.07
VAT1-208ENST00000590924 IRX3P78415 501 aaPredicted RBP21.71■■□□□ 1.07
VAT1-208ENST00000590924 TTF1Q15361 905 aaPredicted RBP21.71■■□□□ 1.07
VAT1-208ENST00000590924 U2AF1L4Q8WU68 220 aaKnown RBP21.71■■□□□ 1.07
VAT1-208ENST00000590924 SMARCA5O60264 1052 aaPredicted RBP21.7■■□□□ 1.06
VAT1-208ENST00000590924 CAPN2P17655 700 aa21.7■■□□□ 1.06
VAT1-208ENST00000590924 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.06
VAT1-208ENST00000590924 SERPINB13Q9UIV8 391 aa21.7■■□□□ 1.06
VAT1-208ENST00000590924 SGPL1O95470 568 aa21.69■■□□□ 1.06
VAT1-208ENST00000590924 NUCB1Q02818 461 aa21.69■■□□□ 1.06
VAT1-208ENST00000590924 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.69■■□□□ 1.06
VAT1-208ENST00000590924 RIOK1Q9BRS2 568 aaKnown RBP21.69■■□□□ 1.06
VAT1-208ENST00000590924 TRIOBPQ9H2D6 2365 aa21.69■■□□□ 1.06
VAT1-208ENST00000590924 GH2P01242 217 aa21.68■■□□□ 1.06
VAT1-208ENST00000590924 HERVK_113P62684 666 aa21.68■■□□□ 1.06
VAT1-208ENST00000590924 TTC6Q86TZ1 520 aa21.68■■□□□ 1.06
VAT1-208ENST00000590924 PAK6Q9NQU5 681 aaPredicted RBP21.68■■□□□ 1.06
VAT1-208ENST00000590924 GJD2Q9UKL4 321 aa21.68■■□□□ 1.06
VAT1-208ENST00000590924 TAOK2Q9UL54 1235 aa21.68■■□□□ 1.06
VAT1-208ENST00000590924 FARP2O94887 1054 aaPredicted RBP21.67■■□□□ 1.06
VAT1-208ENST00000590924 CHD1LQ86WJ1 897 aa21.67■■□□□ 1.06
VAT1-208ENST00000590924 P2RX7Q99572 595 aaKnown RBP21.67■■□□□ 1.06
VAT1-208ENST00000590924 HTATIP2Q9BUP3 242 aa21.67■■□□□ 1.06
VAT1-208ENST00000590924 EMILIN3Q9NT22 766 aa21.67■■□□□ 1.06
VAT1-208ENST00000590924 PPP4R2Q9NY27 417 aa21.67■■□□□ 1.06
VAT1-208ENST00000590924 FRMPD3Q5JV73 1810 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 MAGEB6P1A0A0J9YX57 407 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 H0YGN5 161 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 HMGCRP04035 888 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 PDE6AP16499 860 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 USP17L2Q6R6M4 530 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 CENPQQ7L2Z9 268 aaPredicted RBP21.66■■□□□ 1.06
VAT1-208ENST00000590924 GTF3C2Q8WUA4 911 aaPredicted RBP21.66■■□□□ 1.06
VAT1-208ENST00000590924 GPATCH3Q96I76 525 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 C12orf42Q96LP6 360 aa21.66■■□□□ 1.06
VAT1-208ENST00000590924 PARP14Q460N5 1801 aa21.65■■□□□ 1.06
VAT1-208ENST00000590924 ATP5JP18859 108 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms