RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 NR2E3Q9Y5X4 410 aa13.12□□□□□ -0.31
TUBD1-210ENST00000590498 CT47B1P0C2W7 299 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-210ENST00000590498 ARID4AP29374 1257 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-210ENST00000590498 SH3D19Q5HYK7 790 aa13.11□□□□□ -0.31
TUBD1-210ENST00000590498 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-210ENST00000590498 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
TUBD1-210ENST00000590498 COA7Q96BR5 231 aa13.11□□□□□ -0.31
TUBD1-210ENST00000590498 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
TUBD1-210ENST00000590498 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
TUBD1-210ENST00000590498 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
TUBD1-210ENST00000590498 A0A0C4DFX4 3053 aa13.1□□□□□ -0.31
TUBD1-210ENST00000590498 LOC285556D6RIA3 1793 aa13.1□□□□□ -0.31
TUBD1-210ENST00000590498 EVI5O60447 810 aa13.1□□□□□ -0.31
TUBD1-210ENST00000590498 GNAI3P08754 354 aa13.1□□□□□ -0.31
TUBD1-210ENST00000590498 ADGRA1Q86SQ6 560 aa13.1□□□□□ -0.31
TUBD1-210ENST00000590498 DNAJC18Q9H819 358 aa13.1□□□□□ -0.31
TUBD1-210ENST00000590498 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
TUBD1-210ENST00000590498 HDAC5Q9UQL6 1122 aa13.1□□□□□ -0.31
TUBD1-210ENST00000590498 PLXNB2O15031 1838 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 MAP4K4O95819 1239 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-210ENST00000590498 LDHCP07864 332 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 GCLCP48506 637 aaPredicted RBP13.09□□□□□ -0.31
TUBD1-210ENST00000590498 METTL16Q86W50 562 aaKnown RBP13.09□□□□□ -0.31
TUBD1-210ENST00000590498 TEX11Q8IYF3 940 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 P2RX7Q99572 595 aaKnown RBP13.09□□□□□ -0.31
TUBD1-210ENST00000590498 GDF15Q99988 308 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 TXNRD2Q9NNW7 524 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 SNRKQ9NRH2 765 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 MORF4L1Q9UBU8 362 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 ALPK3Q96L96 1907 aa13.09□□□□□ -0.31
TUBD1-210ENST00000590498 BCAR3O75815 825 aa13.08□□□□□ -0.32
TUBD1-210ENST00000590498 PYGBP11216 843 aa13.08□□□□□ -0.32
TUBD1-210ENST00000590498 TRIM27P14373 513 aa13.08□□□□□ -0.32
TUBD1-210ENST00000590498 GSTO1P78417 241 aa13.08□□□□□ -0.32
TUBD1-210ENST00000590498 Q3C1V9 767 aa13.08□□□□□ -0.32
TUBD1-210ENST00000590498 TRIB2Q92519 343 aa13.08□□□□□ -0.32
TUBD1-210ENST00000590498 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
TUBD1-210ENST00000590498 DOCK3Q8IZD9 2030 aa13.08□□□□□ -0.32
TUBD1-210ENST00000590498 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 HMGCRP04035 888 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 CYP2E1P05181 493 aaPredicted RBP13.07□□□□□ -0.32
TUBD1-210ENST00000590498 PPP4CP60510 307 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 MTMR2Q13614 643 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 MAP3K21Q5TCX8 1036 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 AATFQ9NY61 560 aaKnown RBP eCLIP13.07□□□□□ -0.32
TUBD1-210ENST00000590498 LRP2BPQ9P2M1 347 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 PI4KBQ9UBF8 816 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 RBPJLQ9UBG7 517 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 HERC5Q9UII4 1024 aaKnown RBP13.07□□□□□ -0.32
TUBD1-210ENST00000590498 ZMYND8Q9ULU4 1186 aaPredicted RBP13.07□□□□□ -0.32
TUBD1-210ENST00000590498 RPTORQ8N122 1335 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 DNAH12Q6ZR08 3092 aa13.07□□□□□ -0.32
TUBD1-210ENST00000590498 ATAD5Q96QE3 1844 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 GNAI2P04899 355 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 CAPN2P17655 700 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 CYP2B6P20813 491 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 HOXA7P31268 230 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-210ENST00000590498 BACE1P56817 501 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 MAPKAPK5Q8IW41 473 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 C7orf61Q8IZ16 206 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 TGFBRAP1Q8WUH2 860 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 USP6NLQ92738 828 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 DBNDD2Q9BQY9 259 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 TBC1D2Q9BYX2 928 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 OGDHLQ9ULD0 1010 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 PALD1Q9ULE6 856 aa13.06□□□□□ -0.32
TUBD1-210ENST00000590498 GDF11O95390 407 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 UQCRFS1P1P0C7P4 283 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 SYN1P17600 705 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 BMP8BP34820 402 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 HERVK_113P62684 666 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 DYNLL1P63167 89 aaKnown RBP13.05□□□□□ -0.32
TUBD1-210ENST00000590498 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.32
TUBD1-210ENST00000590498 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.32
TUBD1-210ENST00000590498 NAA16Q6N069 864 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-210ENST00000590498 ANKLE1Q8NAG6 615 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 CLUAP1Q96AJ1 413 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 TMEM121BQ9BXQ6 578 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-210ENST00000590498 PORCNQ9H237 461 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-210ENST00000590498 PIH1D3Q9NQM4 214 aaKnown RBP13.05□□□□□ -0.32
TUBD1-210ENST00000590498 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 PFASO15067 1338 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 FLT1P17948 1338 aa13.05□□□□□ -0.32
TUBD1-210ENST00000590498 SNPHO15079 494 aa13.04□□□□□ -0.32
TUBD1-210ENST00000590498 ZAP70P43403 619 aa13.04□□□□□ -0.32
TUBD1-210ENST00000590498 CACNB2Q08289 660 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-210ENST00000590498 CCL14Q16627 93 aa13.04□□□□□ -0.32
TUBD1-210ENST00000590498 TNNI3KQ59H18 835 aa13.04□□□□□ -0.32
TUBD1-210ENST00000590498 ATF7IPQ6VMQ6 1270 aa13.04□□□□□ -0.32
TUBD1-210ENST00000590498 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-210ENST00000590498 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
TUBD1-210ENST00000590498 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
TUBD1-210ENST00000590498 AS3MTQ9HBK9 375 aa13.04□□□□□ -0.32
TUBD1-210ENST00000590498 SAP30BPQ9UHR5 308 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms