RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SEC31BQ9NQW1 1179 aa17.16■□□□□ 0.34
CIRBP-228ENST00000590347 DDX20Q9UHI6 824 aaKnown RBP17.16■□□□□ 0.34
CIRBP-228ENST00000590347 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
CIRBP-228ENST00000590347 GRIN1Q05586 938 aa17.16■□□□□ 0.34
CIRBP-228ENST00000590347 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-228ENST00000590347 AP1G2O75843 785 aa17.16■□□□□ 0.34
CIRBP-228ENST00000590347 ATP1A1P05023 1023 aaKnown RBP17.16■□□□□ 0.34
CIRBP-228ENST00000590347 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
CIRBP-228ENST00000590347 SPRED3Q2MJR0 410 aa17.16■□□□□ 0.34
CIRBP-228ENST00000590347 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
CIRBP-228ENST00000590347 TRIM6Q9C030 488 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-228ENST00000590347 KIF9Q9HAQ2 790 aa17.16■□□□□ 0.34
CIRBP-228ENST00000590347 CHUKO15111 745 aa17.15■□□□□ 0.34
CIRBP-228ENST00000590347 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
CIRBP-228ENST00000590347 GCKP35557 465 aa17.15■□□□□ 0.34
CIRBP-228ENST00000590347 SNX1Q13596 522 aa17.15■□□□□ 0.34
CIRBP-228ENST00000590347 TBC1D8BQ0IIM8 1120 aa17.15■□□□□ 0.34
CIRBP-228ENST00000590347 BEND3Q5T5X7 828 aa17.15■□□□□ 0.34
CIRBP-228ENST00000590347 KRT14P02533 472 aa17.14■□□□□ 0.34
CIRBP-228ENST00000590347 USP14P54578 494 aa17.14■□□□□ 0.34
CIRBP-228ENST00000590347 XRN1Q8IZH2 1706 aaKnown RBP17.14■□□□□ 0.34
CIRBP-228ENST00000590347 ALDH1L1O75891 902 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 PPFIA1Q13136 1202 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 DHX32Q7L7V1 743 aaKnown RBP17.14■□□□□ 0.33
CIRBP-228ENST00000590347 TEX11Q8IYF3 940 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 GCFC2P16383 781 aaKnown RBP17.14■□□□□ 0.33
CIRBP-228ENST00000590347 CMA1P23946 247 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-228ENST00000590347 ERVK-24P63145 666 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 STAMQ92783 540 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 CHP1Q99653 195 aa17.14■□□□□ 0.33
CIRBP-228ENST00000590347 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 PES1O00541 588 aaKnown RBP17.13■□□□□ 0.33
CIRBP-228ENST00000590347 AARSP49588 968 aaKnown RBP eCLIP17.13■□□□□ 0.33
CIRBP-228ENST00000590347 SLC39A6Q13433 755 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 KRT32Q14532 448 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 ACCSLQ4AC99 568 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 AIDAQ96BJ3 306 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 ZBTB10Q96DT7 871 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 SLC40A1Q9NP59 571 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 EHD2Q9NZN4 543 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 MED23Q9ULK4 1368 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 MEFVO15553 781 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-228ENST00000590347 SHOX2O60902 331 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-228ENST00000590347 GBP2P32456 591 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-228ENST00000590347 HDLBPQ00341 1268 aaKnown RBP17.13■□□□□ 0.33
CIRBP-228ENST00000590347 ARHGEF25Q86VW2 580 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 CCDC13Q8IYE1 715 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 PARD3BQ8TEW8 1205 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 HAUS2Q9NVX0 235 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 TUBE1Q9UJT0 475 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 MAN1B1Q9UKM7 699 aa17.13■□□□□ 0.33
CIRBP-228ENST00000590347 PDE2AO00408 941 aaPredicted RBP17.12■□□□□ 0.33
CIRBP-228ENST00000590347 CPLX1O14810 134 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 PREPLQ4J6C6 727 aaPredicted RBP17.12■□□□□ 0.33
CIRBP-228ENST00000590347 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
CIRBP-228ENST00000590347 CCDC114Q96M63 670 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 NALCNQ8IZF0 1738 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 GOLGA8BA8MQT2 603 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 DNA2P51530 1060 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 TTMPQ5BVD1 217 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 SUCLG2Q96I99 432 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
CIRBP-228ENST00000590347 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 HIP1O00291 1037 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 ARHGAP25P42331 645 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 AFMP43652 599 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 CDR1P51861 262 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 WHAMMP3Q1A5X7 153 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 THOC1Q96FV9 657 aaKnown RBP17.11■□□□□ 0.33
CIRBP-228ENST00000590347 VPS16Q9H269 839 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 PPANQ9NQ55 473 aaKnown RBP17.11■□□□□ 0.33
CIRBP-228ENST00000590347 CCDC102BQ68D86 513 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 FAM228AQ86W67 206 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 PHKBQ93100 1093 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 EEF2KMTQ96G04 330 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 DMGDHQ9UI17 866 aaKnown RBP17.11■□□□□ 0.33
CIRBP-228ENST00000590347 KCNH3Q9ULD8 1083 aa17.11■□□□□ 0.33
CIRBP-228ENST00000590347 USP42Q9H9J4 1324 aaKnown RBP17.11■□□□□ 0.33
CIRBP-228ENST00000590347 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 POLR2DO15514 142 aaKnown RBP17.1■□□□□ 0.33
CIRBP-228ENST00000590347 C21orf2O43822 256 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 ZPR1O75312 459 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 HPDP32754 393 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-228ENST00000590347 NUP88Q99567 741 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-228ENST00000590347 SERTAD1Q9UHV2 236 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 LLPHQ9BRT6 129 aaKnown RBP17.1■□□□□ 0.33
CIRBP-228ENST00000590347 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 E7EWF7 191 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 CXCR5P32302 372 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 WDR93Q6P2C0 686 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 RNPC3Q96LT9 517 aaKnown RBP17.1■□□□□ 0.33
CIRBP-228ENST00000590347 JADE2Q9NQC1 790 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms