RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 TMED8Q6PL24 325 aaPredicted RBP21.86■■□□□ 1.09
PRKCSH-211ENST00000590098 MIGA1Q8NAN2 632 aa21.86■■□□□ 1.09
PRKCSH-211ENST00000590098 PXYLP1Q8TE99 480 aa21.86■■□□□ 1.09
PRKCSH-211ENST00000590098 ASCC2Q9H1I8 757 aaPredicted RBP21.86■■□□□ 1.09
PRKCSH-211ENST00000590098 PCDH10Q9P2E7 1040 aa21.86■■□□□ 1.09
PRKCSH-211ENST00000590098 TAOK2Q9UL54 1235 aa21.86■■□□□ 1.09
PRKCSH-211ENST00000590098 NDUFB9Q9Y6M9 179 aa21.86■■□□□ 1.09
PRKCSH-211ENST00000590098 ELNP15502 786 aa21.85■■□□□ 1.09
PRKCSH-211ENST00000590098 DNAJC18Q9H819 358 aa21.85■■□□□ 1.09
PRKCSH-211ENST00000590098 C19orf81C9J6K1 198 aa21.84■■□□□ 1.09
PRKCSH-211ENST00000590098 USP17L10C9JJH3 530 aa21.84■■□□□ 1.09
PRKCSH-211ENST00000590098 GDF11O95390 407 aa21.84■■□□□ 1.09
PRKCSH-211ENST00000590098 INHAP05111 366 aa21.84■■□□□ 1.09
PRKCSH-211ENST00000590098 IRX3P78415 501 aaPredicted RBP21.84■■□□□ 1.09
PRKCSH-211ENST00000590098 UNC93B1Q9H1C4 597 aa21.84■■□□□ 1.09
PRKCSH-211ENST00000590098 SHROOM1Q2M3G4 852 aaPredicted RBP21.83■■□□□ 1.09
PRKCSH-211ENST00000590098 RHPN1Q8TCX5 695 aa21.83■■□□□ 1.09
PRKCSH-211ENST00000590098 DPF3Q92784 378 aa21.83■■□□□ 1.09
PRKCSH-211ENST00000590098 ANTXR1Q9H6X2 564 aa21.83■■□□□ 1.09
PRKCSH-211ENST00000590098 IL1RAPL2Q9NP60 686 aa21.83■■□□□ 1.09
PRKCSH-211ENST00000590098 ZBTB21Q9ULJ3 1066 aa21.83■■□□□ 1.09
PRKCSH-211ENST00000590098 H0YGN5 161 aa21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 HMMRO75330 724 aa21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 TTF1Q15361 905 aaPredicted RBP21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 UBE2Q1Q7Z7E8 422 aa21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 RPAP2Q8IXW5 612 aaPredicted RBP21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 CLASRPQ8N2M8 674 aaKnown RBP21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 U2AF1L4Q8WU68 220 aaKnown RBP21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 DDX19BQ9UMR2 479 aa21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 COLQQ9Y215 455 aaPredicted RBP21.82■■□□□ 1.08
PRKCSH-211ENST00000590098 APBB1O00213 710 aa21.81■■□□□ 1.08
PRKCSH-211ENST00000590098 SGPL1O95470 568 aa21.81■■□□□ 1.08
PRKCSH-211ENST00000590098 HOXA7P31268 230 aaPredicted RBP21.81■■□□□ 1.08
PRKCSH-211ENST00000590098 HTATIP2Q9BUP3 242 aa21.81■■□□□ 1.08
PRKCSH-211ENST00000590098 TTC6Q86TZ1 520 aa21.8■■□□□ 1.08
PRKCSH-211ENST00000590098 KIF1BPQ96EK5 621 aa21.8■■□□□ 1.08
PRKCSH-211ENST00000590098 MORF4L1Q9UBU8 362 aa21.8■■□□□ 1.08
PRKCSH-211ENST00000590098 SERPINB13Q9UIV8 391 aa21.8■■□□□ 1.08
PRKCSH-211ENST00000590098 GH2P01242 217 aa21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 TFRCP02786 760 aaKnown RBP21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 IFIT2P09913 472 aaKnown RBP21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 CAPN2P17655 700 aa21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 USP17L2Q6R6M4 530 aa21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 P2RX7Q99572 595 aaKnown RBP21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 BCL11AQ9H165 835 aa21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 CHMP4BQ9H444 224 aaKnown RBP21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 COG6Q9Y2V7 657 aa21.79■■□□□ 1.08
PRKCSH-211ENST00000590098 MAGEB6P1A0A0J9YX57 407 aa21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 PEX10O60683 326 aa21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 FARP2O94887 1054 aaPredicted RBP21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 HERVK_113P62684 666 aa21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 SLC9C2Q5TAH2 1124 aa21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 TATDN1Q6P1N9 297 aa21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 GPRC5AQ8NFJ5 357 aa21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 DEFB118Q96PH6 123 aa21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 EHD4Q9H223 541 aa21.78■■□□□ 1.08
PRKCSH-211ENST00000590098 FXR1P51114 621 aaKnown RBP eCLIP21.77■■□□□ 1.08
PRKCSH-211ENST00000590098 CERKLQ49MI3 558 aaPredicted RBP21.77■■□□□ 1.08
PRKCSH-211ENST00000590098 FEZ1Q99689 392 aa21.77■■□□□ 1.08
PRKCSH-211ENST00000590098 ZBTB40Q9NUA8 1239 aa21.77■■□□□ 1.08
PRKCSH-211ENST00000590098 RAB11FIP3O75154 756 aa21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 HMGCRP04035 888 aa21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 RAB3GAP1Q15042 981 aa21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 CCAR1Q8IX12 1150 aaKnown RBP21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 GTF3C2Q8WUA4 911 aaPredicted RBP21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 DNAJC2Q99543 621 aaKnown RBP21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 RIOK1Q9BRS2 568 aaKnown RBP21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 CRNKL1Q9BZJ0 848 aaKnown RBP21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 PAK6Q9NQU5 681 aaPredicted RBP21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 EMILIN3Q9NT22 766 aa21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 GJD2Q9UKL4 321 aa21.76■■□□□ 1.07
PRKCSH-211ENST00000590098 GOLIM4O00461 696 aa21.75■■□□□ 1.07
PRKCSH-211ENST00000590098 POLR3DP05423 398 aaPredicted RBP21.75■■□□□ 1.07
PRKCSH-211ENST00000590098 PDE6AP16499 860 aa21.75■■□□□ 1.07
PRKCSH-211ENST00000590098 ABCB5Q2M3G0 1257 aa21.75■■□□□ 1.07
PRKCSH-211ENST00000590098 SIRT2Q8IXJ6 389 aa21.75■■□□□ 1.07
PRKCSH-211ENST00000590098 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.75■■□□□ 1.07
PRKCSH-211ENST00000590098 CABP5Q9NP86 173 aa21.75■■□□□ 1.07
PRKCSH-211ENST00000590098 NR2E3Q9Y5X4 410 aa21.75■■□□□ 1.07
PRKCSH-211ENST00000590098 TRIOBPQ9H2D6 2365 aa21.74■■□□□ 1.07
PRKCSH-211ENST00000590098 PLCD1P51178 756 aa21.74■■□□□ 1.07
PRKCSH-211ENST00000590098 ZYXQ15942 572 aaKnown RBP21.74■■□□□ 1.07
PRKCSH-211ENST00000590098 TXNRD2Q9NNW7 524 aa21.74■■□□□ 1.07
PRKCSH-211ENST00000590098 RBPJLQ9UBG7 517 aa21.74■■□□□ 1.07
PRKCSH-211ENST00000590098 RCAN3Q9UKA8 241 aa21.74■■□□□ 1.07
PRKCSH-211ENST00000590098 NAV1Q8NEY1 1877 aa21.74■■□□□ 1.07
PRKCSH-211ENST00000590098 MAPK4P31152 587 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 USP14P54578 494 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 PDE3AQ14432 1141 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 POTEEQ6S8J3 1075 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 SOCS4Q8WXH5 440 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 C12orf42Q96LP6 360 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 NUDT12Q9BQG2 462 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 PAGR1Q9BTK6 254 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 CRISPLD2Q9H0B8 497 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 ZNF532Q9HCE3 1301 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 PLXNB2O15031 1838 aa21.73■■□□□ 1.07
PRKCSH-211ENST00000590098 USP17L15C9J2P7 530 aa21.72■■□□□ 1.07
PRKCSH-211ENST00000590098 USP17L13C9JLJ4 530 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms