RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 USP17L10C9JJH3 530 aa25.66■■□□□ 1.7
TMC6-213ENST00000589933 MTMR2Q13614 643 aa25.66■■□□□ 1.7
TMC6-213ENST00000589933 HABP4Q5JVS0 413 aaKnown RBP25.66■■□□□ 1.7
TMC6-213ENST00000589933 METTL16Q86W50 562 aaKnown RBP25.66■■□□□ 1.7
TMC6-213ENST00000589933 MAGEB6Q8N7X4 407 aa25.66■■□□□ 1.7
TMC6-213ENST00000589933 SAP30BPQ9UHR5 308 aaKnown RBP25.66■■□□□ 1.7
TMC6-213ENST00000589933 RRP1BQ14684 758 aaKnown RBP25.65■■□□□ 1.7
TMC6-213ENST00000589933 TTC6Q86TZ1 520 aa25.65■■□□□ 1.7
TMC6-213ENST00000589933 CLASRPQ8N2M8 674 aaKnown RBP25.65■■□□□ 1.7
TMC6-213ENST00000589933 INHAP05111 366 aa25.64■■□□□ 1.7
TMC6-213ENST00000589933 ELNP15502 786 aa25.64■■□□□ 1.7
TMC6-213ENST00000589933 DYNLL1P63167 89 aaKnown RBP25.64■■□□□ 1.7
TMC6-213ENST00000589933 RPAP2Q8IXW5 612 aaPredicted RBP25.64■■□□□ 1.7
TMC6-213ENST00000589933 MIGA1Q8NAN2 632 aa25.64■■□□□ 1.7
TMC6-213ENST00000589933 U2AF1L4Q8WU68 220 aaKnown RBP25.64■■□□□ 1.7
TMC6-213ENST00000589933 SHISA4Q96DD7 197 aa25.64■■□□□ 1.7
TMC6-213ENST00000589933 UNC93B1Q9H1C4 597 aa25.64■■□□□ 1.7
TMC6-213ENST00000589933 DDX19BQ9UMR2 479 aa25.64■■□□□ 1.7
TMC6-213ENST00000589933 GDF11O95390 407 aa25.63■■□□□ 1.69
TMC6-213ENST00000589933 SGPL1O95470 568 aa25.63■■□□□ 1.69
TMC6-213ENST00000589933 RHPN1Q8TCX5 695 aa25.63■■□□□ 1.69
TMC6-213ENST00000589933 GTF3C2Q8WUA4 911 aaPredicted RBP25.63■■□□□ 1.69
TMC6-213ENST00000589933 ZBTB21Q9ULJ3 1066 aa25.63■■□□□ 1.69
TMC6-213ENST00000589933 HOXA7P31268 230 aaPredicted RBP25.62■■□□□ 1.69
TMC6-213ENST00000589933 CCAR1Q8IX12 1150 aaKnown RBP25.62■■□□□ 1.69
TMC6-213ENST00000589933 KIF1BPQ96EK5 621 aa25.62■■□□□ 1.69
TMC6-213ENST00000589933 DNAJC18Q9H819 358 aa25.62■■□□□ 1.69
TMC6-213ENST00000589933 SERPINB13Q9UIV8 391 aa25.62■■□□□ 1.69
TMC6-213ENST00000589933 FARP2O94887 1054 aaPredicted RBP25.61■■□□□ 1.69
TMC6-213ENST00000589933 TFRCP02786 760 aaKnown RBP25.61■■□□□ 1.69
TMC6-213ENST00000589933 IFIT2P09913 472 aaKnown RBP25.61■■□□□ 1.69
TMC6-213ENST00000589933 USP17L2Q6R6M4 530 aa25.61■■□□□ 1.69
TMC6-213ENST00000589933 IL1RAPL2Q9NP60 686 aa25.61■■□□□ 1.69
TMC6-213ENST00000589933 CENPFP49454 3210 aa25.6■■□□□ 1.69
TMC6-213ENST00000589933 FEZ1Q99689 392 aa25.6■■□□□ 1.69
TMC6-213ENST00000589933 EHD4Q9H223 541 aa25.6■■□□□ 1.69
TMC6-213ENST00000589933 CABP5Q9NP86 173 aa25.6■■□□□ 1.69
TMC6-213ENST00000589933 MORF4L1Q9UBU8 362 aa25.6■■□□□ 1.69
TMC6-213ENST00000589933 NR2E3Q9Y5X4 410 aa25.6■■□□□ 1.69
TMC6-213ENST00000589933 GPRC5AQ8NFJ5 357 aa25.59■■□□□ 1.69
TMC6-213ENST00000589933 ANTXR1Q9H6X2 564 aa25.59■■□□□ 1.69
TMC6-213ENST00000589933 NDUFB9Q9Y6M9 179 aa25.59■■□□□ 1.69
TMC6-213ENST00000589933 MAGEB6P1A0A0J9YX57 407 aa25.58■■□□□ 1.69
TMC6-213ENST00000589933 H0YGN5 161 aa25.58■■□□□ 1.69
TMC6-213ENST00000589933 APBB1O00213 710 aa25.58■■□□□ 1.69
TMC6-213ENST00000589933 RAB11FIP3O75154 756 aa25.58■■□□□ 1.69
TMC6-213ENST00000589933 HMGCRP04035 888 aa25.58■■□□□ 1.69
TMC6-213ENST00000589933 DEFB118Q96PH6 123 aa25.58■■□□□ 1.69
TMC6-213ENST00000589933 GH2P01242 217 aa25.57■■□□□ 1.68
TMC6-213ENST00000589933 POLR3DP05423 398 aaPredicted RBP25.57■■□□□ 1.68
TMC6-213ENST00000589933 USP14P54578 494 aa25.57■■□□□ 1.68
TMC6-213ENST00000589933 HERVK_113P62684 666 aa25.57■■□□□ 1.68
TMC6-213ENST00000589933 PDE3AQ14432 1141 aa25.57■■□□□ 1.68
TMC6-213ENST00000589933 CERKLQ49MI3 558 aaPredicted RBP25.57■■□□□ 1.68
TMC6-213ENST00000589933 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.57■■□□□ 1.68
TMC6-213ENST00000589933 P2RX7Q99572 595 aaKnown RBP25.57■■□□□ 1.68
TMC6-213ENST00000589933 CRNKL1Q9BZJ0 848 aaKnown RBP25.57■■□□□ 1.68
TMC6-213ENST00000589933 NAV1Q8NEY1 1877 aa25.57■■□□□ 1.68
TMC6-213ENST00000589933 MAPK4P31152 587 aa25.56■■□□□ 1.68
TMC6-213ENST00000589933 SLC9C2Q5TAH2 1124 aa25.56■■□□□ 1.68
TMC6-213ENST00000589933 TATDN1Q6P1N9 297 aa25.56■■□□□ 1.68
TMC6-213ENST00000589933 SOCS4Q8WXH5 440 aa25.56■■□□□ 1.68
TMC6-213ENST00000589933 NUDT12Q9BQG2 462 aa25.56■■□□□ 1.68
TMC6-213ENST00000589933 CWC22Q9HCG8 908 aaKnown RBP25.56■■□□□ 1.68
TMC6-213ENST00000589933 COG6Q9Y2V7 657 aa25.56■■□□□ 1.68
TMC6-213ENST00000589933 JAG1P78504 1218 aa25.55■■□□□ 1.68
TMC6-213ENST00000589933 RAB3GAP1Q15042 981 aa25.55■■□□□ 1.68
TMC6-213ENST00000589933 ABCB5Q2M3G0 1257 aa25.55■■□□□ 1.68
TMC6-213ENST00000589933 TRMT44Q8IYL2 757 aaKnown RBP25.55■■□□□ 1.68
TMC6-213ENST00000589933 BCL11AQ9H165 835 aa25.55■■□□□ 1.68
TMC6-213ENST00000589933 HMX1Q9NP08 348 aaPredicted RBP25.55■■□□□ 1.68
TMC6-213ENST00000589933 PAK6Q9NQU5 681 aaPredicted RBP25.55■■□□□ 1.68
TMC6-213ENST00000589933 COLQQ9Y215 455 aaPredicted RBP25.55■■□□□ 1.68
TMC6-213ENST00000589933 CEP290O15078 2479 aa25.55■■□□□ 1.68
TMC6-213ENST00000589933 MYH8P13535 1937 aa25.55■■□□□ 1.68
TMC6-213ENST00000589933 UBE2Q1Q7Z7E8 422 aa25.54■■□□□ 1.68
TMC6-213ENST00000589933 DNAJC2Q99543 621 aaKnown RBP25.54■■□□□ 1.68
TMC6-213ENST00000589933 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.54■■□□□ 1.68
TMC6-213ENST00000589933 PDE6AP16499 860 aa25.53■■□□□ 1.68
TMC6-213ENST00000589933 EMILIN3Q9NT22 766 aa25.53■■□□□ 1.68
TMC6-213ENST00000589933 ZBTB40Q9NUA8 1239 aa25.53■■□□□ 1.68
TMC6-213ENST00000589933 GJD2Q9UKL4 321 aa25.53■■□□□ 1.68
TMC6-213ENST00000589933 RPTORQ8N122 1335 aa25.53■■□□□ 1.68
TMC6-213ENST00000589933 USP17L15C9J2P7 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 USP17L13C9JLJ4 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 USP17L11C9JVI0 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 USP17L18D6R9N7 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 USP17L22D6RA61 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 USP17L17D6RBQ6 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 USP17L19D6RCP7 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 USP17L20D6RJB6 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 GOLIM4O00461 696 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 ERVK-9P63128 1117 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 ERVK-24P63145 666 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 CCNA1P78396 465 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 USP17L24Q0WX57 530 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 C12orf42Q96LP6 360 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 RIOK1Q9BRS2 568 aaKnown RBP25.52■■□□□ 1.68
TMC6-213ENST00000589933 PAGR1Q9BTK6 254 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 MCM9Q9NXL9 1143 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms