RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 ELNP15502 786 aa28.98■■■□□ 2.23
LSM7-205ENST00000589532 UBXN2AP68543 259 aa28.98■■■□□ 2.23
LSM7-205ENST00000589532 PABPC4Q13310 644 aaKnown RBP eCLIP28.98■■■□□ 2.231e-14■■■■□ 25.1
LSM7-205ENST00000589532 HABP4Q5JVS0 413 aaKnown RBP28.98■■■□□ 2.23
LSM7-205ENST00000589532 TMED8Q6PL24 325 aaPredicted RBP28.98■■■□□ 2.23
LSM7-205ENST00000589532 MAGEB6Q8N7X4 407 aa28.98■■■□□ 2.23
LSM7-205ENST00000589532 NKX2-3Q8TAU0 364 aa28.98■■■□□ 2.23
LSM7-205ENST00000589532 UNC93B1Q9H1C4 597 aa28.98■■■□□ 2.23
LSM7-205ENST00000589532 SAP30BPQ9UHR5 308 aaKnown RBP28.98■■■□□ 2.23
LSM7-205ENST00000589532 CERS3Q8IU89 383 aa28.97■■■□□ 2.23
LSM7-205ENST00000589532 SIRT2Q8IXJ6 389 aa28.97■■■□□ 2.23
LSM7-205ENST00000589532 RHPN1Q8TCX5 695 aa28.97■■■□□ 2.23
LSM7-205ENST00000589532 RNF208Q9H0X6 261 aa28.97■■■□□ 2.23
LSM7-205ENST00000589532 MORF4L1Q9UBU8 362 aa28.97■■■□□ 2.23
LSM7-205ENST00000589532 INHAP05111 366 aa28.96■■■□□ 2.23
LSM7-205ENST00000589532 CRACR2BQ8N4Y2 399 aaPredicted RBP28.96■■■□□ 2.23
LSM7-205ENST00000589532 RIOK1Q9BRS2 568 aaKnown RBP28.96■■■□□ 2.23
LSM7-205ENST00000589532 IL1RAPL2Q9NP60 686 aa28.96■■■□□ 2.23
LSM7-205ENST00000589532 HLA-DOAP06340 250 aa28.95■■■□□ 2.22
LSM7-205ENST00000589532 HOXA7P31268 230 aaPredicted RBP28.95■■■□□ 2.22
LSM7-205ENST00000589532 U2AF1L4Q8WU68 220 aaKnown RBP28.95■■■□□ 2.22
LSM7-205ENST00000589532 EHD4Q9H223 541 aa28.95■■■□□ 2.22
LSM7-205ENST00000589532 ZBTB40Q9NUA8 1239 aa28.95■■■□□ 2.22
LSM7-205ENST00000589532 HSP90AB4PQ58FF6 505 aa28.94■■■□□ 2.22
LSM7-205ENST00000589532 TATDN1Q6P1N9 297 aa28.94■■■□□ 2.22
LSM7-205ENST00000589532 COA7Q96BR5 231 aa28.94■■■□□ 2.22
LSM7-205ENST00000589532 BIN2Q9UBW5 565 aaPredicted RBP28.94■■■□□ 2.22
LSM7-205ENST00000589532 MAP3K12Q12852 859 aa28.93■■■□□ 2.22
LSM7-205ENST00000589532 PAK6Q9NQU5 681 aaPredicted RBP28.93■■■□□ 2.22
LSM7-205ENST00000589532 TRIOBPQ9H2D6 2365 aa28.93■■■□□ 2.22
LSM7-205ENST00000589532 RPAP2Q8IXW5 612 aaPredicted RBP28.92■■■□□ 2.22
LSM7-205ENST00000589532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.92■■■□□ 2.22
LSM7-205ENST00000589532 TRIM34Q9BYJ4 488 aa28.92■■■□□ 2.22
LSM7-205ENST00000589532 GJD2Q9UKL4 321 aa28.92■■■□□ 2.22
LSM7-205ENST00000589532 DDX19BQ9UMR2 479 aa28.92■■■□□ 2.22
LSM7-205ENST00000589532 C19orf81C9J6K1 198 aa28.91■■■□□ 2.22
LSM7-205ENST00000589532 USP17L10C9JJH3 530 aa28.91■■■□□ 2.22
LSM7-205ENST00000589532 SZT2Q5T011 3432 aa28.91■■■□□ 2.22
LSM7-205ENST00000589532 H0YGN5 161 aa28.9■■■□□ 2.22
LSM7-205ENST00000589532 SGPL1O95470 568 aa28.9■■■□□ 2.22
LSM7-205ENST00000589532 KIF1BPQ96EK5 621 aa28.9■■■□□ 2.22
LSM7-205ENST00000589532 TXNRD2Q9NNW7 524 aa28.9■■■□□ 2.22
LSM7-205ENST00000589532 EMILIN3Q9NT22 766 aa28.9■■■□□ 2.22
LSM7-205ENST00000589532 TMOD4Q9NZQ9 345 aa28.9■■■□□ 2.22
LSM7-205ENST00000589532 SERPINB13Q9UIV8 391 aa28.9■■■□□ 2.22
LSM7-205ENST00000589532 COG6Q9Y2V7 657 aa28.9■■■□□ 2.22
LSM7-205ENST00000589532 GH2P01242 217 aa28.89■■■□□ 2.22
LSM7-205ENST00000589532 USP5P45974 858 aa28.89■■■□□ 2.22
LSM7-205ENST00000589532 HERVK_113P62684 666 aa28.89■■■□□ 2.22
LSM7-205ENST00000589532 IRX3P78415 501 aaPredicted RBP28.89■■■□□ 2.22
LSM7-205ENST00000589532 POTEEQ6S8J3 1075 aa28.89■■■□□ 2.22
LSM7-205ENST00000589532 C12orf42Q96LP6 360 aa28.89■■■□□ 2.22
LSM7-205ENST00000589532 P2RX7Q99572 595 aaKnown RBP28.89■■■□□ 2.22
LSM7-205ENST00000589532 CHMP4BQ9H444 224 aaKnown RBP28.89■■■□□ 2.22
LSM7-205ENST00000589532 PEX10O60683 326 aa28.88■■■□□ 2.21
LSM7-205ENST00000589532 PDE6AP16499 860 aa28.88■■■□□ 2.21
LSM7-205ENST00000589532 CRISPLD2Q9H0B8 497 aa28.88■■■□□ 2.21
LSM7-205ENST00000589532 ALPK3Q96L96 1907 aa28.87■■■□□ 2.21
LSM7-205ENST00000589532 TCRBV5S4A2TA0A5A2 114 aa28.87■■■□□ 2.21
LSM7-205ENST00000589532 FARP2O94887 1054 aaPredicted RBP28.87■■■□□ 2.21
LSM7-205ENST00000589532 SHMT1P34896 483 aa28.87■■■□□ 2.21
LSM7-205ENST00000589532 TTF1Q15361 905 aaPredicted RBP28.87■■■□□ 2.21
LSM7-205ENST00000589532 CLASRPQ8N2M8 674 aaKnown RBP28.87■■■□□ 2.21
LSM7-205ENST00000589532 COLQQ9Y215 455 aaPredicted RBP28.87■■■□□ 2.21
LSM7-205ENST00000589532 HMGCRP04035 888 aa28.86■■■□□ 2.21
LSM7-205ENST00000589532 PLCD1P51178 756 aa28.86■■■□□ 2.21
LSM7-205ENST00000589532 GABPAQ06546 454 aa28.86■■■□□ 2.21
LSM7-205ENST00000589532 PDE3AQ14432 1141 aa28.86■■■□□ 2.21
LSM7-205ENST00000589532 HMMRO75330 724 aa28.85■■■□□ 2.21
LSM7-205ENST00000589532 DEFB118Q96PH6 123 aa28.85■■■□□ 2.21
LSM7-205ENST00000589532 RBPJLQ9UBG7 517 aa28.85■■■□□ 2.21
LSM7-205ENST00000589532 TAOK2Q9UL54 1235 aa28.85■■■□□ 2.21
LSM7-205ENST00000589532 CAPN2P17655 700 aa28.84■■■□□ 2.21
LSM7-205ENST00000589532 FXR1P51114 621 aaKnown RBP eCLIP28.84■■■□□ 2.21
LSM7-205ENST00000589532 EVX2Q03828 476 aa28.84■■■□□ 2.21
LSM7-205ENST00000589532 SLC9C2Q5TAH2 1124 aa28.84■■■□□ 2.21
LSM7-205ENST00000589532 USP17L2Q6R6M4 530 aa28.84■■■□□ 2.21
LSM7-205ENST00000589532 TTC6Q86TZ1 520 aa28.84■■■□□ 2.21
LSM7-205ENST00000589532 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.84■■■□□ 2.21
LSM7-205ENST00000589532 ZNF532Q9HCE3 1301 aa28.84■■■□□ 2.21
LSM7-205ENST00000589532 MYH7P12883 1935 aa28.83■■■□□ 2.21
LSM7-205ENST00000589532 MAGEB6P1A0A0J9YX57 407 aa28.83■■■□□ 2.21
LSM7-205ENST00000589532 APBB1O00213 710 aa28.83■■■□□ 2.21
LSM7-205ENST00000589532 GOLIM4O00461 696 aa28.83■■■□□ 2.21
LSM7-205ENST00000589532 EDC3Q96F86 508 aaKnown RBP28.83■■■□□ 2.21
LSM7-205ENST00000589532 LAMA3Q16787 3333 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 RAB11FIP3O75154 756 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 GUCY1A2P33402 732 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 ERVK-9P63128 1117 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 ERVK-24P63145 666 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 TRIM32Q13049 653 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 GPRC5AQ8NFJ5 357 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 GTF3C2Q8WUA4 911 aaPredicted RBP28.82■■■□□ 2.2
LSM7-205ENST00000589532 TRIB2Q92519 343 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 DNAJC2Q99543 621 aaKnown RBP28.82■■■□□ 2.2
LSM7-205ENST00000589532 HTATIP2Q9BUP3 242 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 KIAA1683Q9H0B3 1180 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 A0A0G2JMZ2 1700 aa28.82■■■□□ 2.2
LSM7-205ENST00000589532 IFIT2P09913 472 aaKnown RBP28.81■■■□□ 2.2
LSM7-205ENST00000589532 CERKLQ49MI3 558 aaPredicted RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms