RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 ASNSP08243 561 aa12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 FOXP4Q8IVH2 680 aaPredicted RBP12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 SAP30BPQ9UHR5 308 aaKnown RBP12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 ZNF532Q9HCE3 1301 aa12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 LACTBP83111 547 aaPredicted RBP12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 AMOTL1Q8IY63 956 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 ZNF280CQ8ND82 737 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 SMCR8Q8TEV9 937 aaPredicted RBP12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 SH3TC2Q8TF17 1288 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 HAUS7Q99871 368 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 EHD4Q9H223 541 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 DCTPP1Q9H773 170 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 PALD1Q9ULE6 856 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 AGTPBP1Q9UPW5 1226 aa12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 SPTBN5Q9NRC6 3674 aaKnown RBP12.8□□□□□ -0.36
CLPTM1-211ENST00000589347 PRMT2P55345 433 aa12.79□□□□□ -0.36
CLPTM1-211ENST00000589347 LRRFIP1Q32MZ4 808 aaKnown RBP12.79□□□□□ -0.36
CLPTM1-211ENST00000589347 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
CLPTM1-211ENST00000589347 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
CLPTM1-211ENST00000589347 LAMA2P24043 3122 aaKnown RBP12.79□□□□□ -0.36
CLPTM1-211ENST00000589347 MYH4Q9Y623 1939 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 ERC2O15083 957 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 MYCP01106 439 aaPredicted RBP12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 POLR3DP05423 398 aaPredicted RBP12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 SLURP2P0DP57 97 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 OSBPP22059 807 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 HOXD10P28358 340 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 ADD2P35612 726 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 AAMPQ13685 434 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 MOGSQ13724 837 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 DPF3Q92784 378 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 RIOK1Q9BRS2 568 aaKnown RBP12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 TMOD4Q9NZQ9 345 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 CPA4Q9UI42 421 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 ZBTB21Q9ULJ3 1066 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 ADGRA2Q96PE1 1338 aa12.78□□□□□ -0.36
CLPTM1-211ENST00000589347 EYSQ5T1H1 3165 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 TCRBV5S4A2TA0A5A2 114 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 GDF11O95390 407 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 FCGRTP55899 365 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 SPP2Q13103 211 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 UBE3CQ15386 1083 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 GPAT2Q6NUI2 795 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 C17orf99Q6UX52 265 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 CRBNQ96SW2 442 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 HTATIP2Q9BUP3 242 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 WDR18Q9BV38 432 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 DNAJC18Q9H819 358 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 CABP5Q9NP86 173 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 TTC41PQ6P2S7 1318 aa12.77□□□□□ -0.37
CLPTM1-211ENST00000589347 PARP14Q460N5 1801 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 MBD4O95243 580 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 FMNL1O95466 1100 aaPredicted RBP12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 CYP2C8P10632 490 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 GJA8P48165 433 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 HMGCS2P54868 508 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 MTFR1Q15390 333 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 LCORLQ8N3X6 602 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 FEZ1Q99689 392 aa12.76□□□□□ -0.37
CLPTM1-211ENST00000589347 C19orf81C9J6K1 198 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 USP17L10C9JJH3 530 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 BCRP11274 1271 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 PSMC4P43686 418 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 BACE1P56817 501 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 IRX3P78415 501 aaPredicted RBP12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 MTMR2Q13614 643 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 FAM110CQ1W6H9 321 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 GTF3C2Q8WUA4 911 aaPredicted RBP12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 ARMT1Q9H993 441 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 ATP8A2Q9NTI2 1148 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 SWAP70Q9UH65 585 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
CLPTM1-211ENST00000589347 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 GLRX3O76003 335 aaKnown RBP12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 GH2P01242 217 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 GJB1P08034 283 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 GCLCP48506 637 aaPredicted RBP12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 USP14P54578 494 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms