RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 ARMT1Q9H993 441 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 RTEL1Q9NZ71 1219 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
LRFN3-204ENST00000588831 NRXN3Q9Y4C0 1643 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 XRN1Q8IZH2 1706 aaKnown RBP13.8□□□□□ -0.2
LRFN3-204ENST00000588831 NDUFAB1O14561 156 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 ZBTB43O43298 467 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
LRFN3-204ENST00000588831 EIF5P55010 431 aaKnown RBP13.8□□□□□ -0.2
LRFN3-204ENST00000588831 ANTXR2P58335 489 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 BAG1Q99933 345 aaPredicted RBP13.8□□□□□ -0.2
LRFN3-204ENST00000588831 LLPHQ9BRT6 129 aaKnown RBP13.8□□□□□ -0.2
LRFN3-204ENST00000588831 CABP5Q9NP86 173 aa13.8□□□□□ -0.2
LRFN3-204ENST00000588831 SOWAHDA6NJG2 315 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 CCP110O43303 1012 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 PPP1R12BO60237 982 aaPredicted RBP13.79□□□□□ -0.2
LRFN3-204ENST00000588831 N4BP1O75113 896 aaKnown RBP13.79□□□□□ -0.2
LRFN3-204ENST00000588831 CEP85LQ5SZL2 805 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 TBC1D31Q96DN5 1066 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 POLD4Q9HCU8 107 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 TFR2Q9UP52 801 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 GOLGA6L7A0A1B0GV03 622 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 BLZF1Q9H2G9 400 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 CD248Q9HCU0 757 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 HELLSQ9NRZ9 838 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 FOXO4P98177 505 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 SARM1Q6SZW1 724 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
LRFN3-204ENST00000588831 PPP2R2CQ9Y2T4 447 aa13.79□□□□□ -0.2
LRFN3-204ENST00000588831 NUTM2BA6NNL0 878 aaPredicted RBP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 ADAMTS2O95450 1211 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 DNA2P51530 1060 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 RBM5P52756 815 aaKnown RBP eCLIP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 ZBTB10Q96DT7 871 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 NAPBQ9H115 298 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 WWC3Q9ULE0 1092 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 HPS5Q9UPZ3 1129 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 DIP2AQ14689 1571 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 TEX33O43247 280 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 ZMYND10O75800 440 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 CAVIN2O95810 425 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 HNRNPH1P31943 449 aaKnown RBP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 RBBP5Q15291 538 aaKnown RBP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 CC2D1AQ6P1N0 951 aaPredicted RBP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 MYBL1P10243 752 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 FMR1Q06787 632 aaKnown RBP eCLIP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 NCAPHQ15003 741 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
LRFN3-204ENST00000588831 ZNF569Q5MCW4 686 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 DSCC1Q9BVC3 393 aa13.78□□□□□ -0.2
LRFN3-204ENST00000588831 FANCGO15287 622 aa13.77□□□□□ -0.2
LRFN3-204ENST00000588831 ZSCAN12O43309 604 aa13.77□□□□□ -0.2
LRFN3-204ENST00000588831 ELF1P32519 619 aa13.77□□□□□ -0.2
LRFN3-204ENST00000588831 MAGEB6Q8N7X4 407 aa13.77□□□□□ -0.2
LRFN3-204ENST00000588831 VPS16Q9H269 839 aa13.77□□□□□ -0.2
LRFN3-204ENST00000588831 GNL3LQ9NVN8 582 aaKnown RBP13.77□□□□□ -0.2
LRFN3-204ENST00000588831 ZNF532Q9HCE3 1301 aa13.77□□□□□ -0.2
LRFN3-204ENST00000588831 PHKA1P46020 1223 aa13.77□□□□□ -0.21
LRFN3-204ENST00000588831 KCTD19Q17RG1 926 aaPredicted RBP13.77□□□□□ -0.21
LRFN3-204ENST00000588831 DIS3L2Q8IYB7 885 aaKnown RBP13.77□□□□□ -0.21
LRFN3-204ENST00000588831 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
LRFN3-204ENST00000588831 ZNF274Q96GC6 653 aaPredicted RBP13.77□□□□□ -0.21
LRFN3-204ENST00000588831 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.21
LRFN3-204ENST00000588831 TACO1Q9BSH4 297 aaKnown RBP13.77□□□□□ -0.21
LRFN3-204ENST00000588831 MED4Q9NPJ6 270 aa13.77□□□□□ -0.21
LRFN3-204ENST00000588831 MYO6Q9UM54 1294 aa13.77□□□□□ -0.21
LRFN3-204ENST00000588831 AP1G2O75843 785 aa13.77□□□□□ -0.21
LRFN3-204ENST00000588831 CDC25BP30305 580 aa13.77□□□□□ -0.21
LRFN3-204ENST00000588831 GREM2Q9H772 168 aa13.77□□□□□ -0.21
LRFN3-204ENST00000588831 LRRFIP1Q32MZ4 808 aaKnown RBP13.76□□□□□ -0.21
LRFN3-204ENST00000588831 METTL16Q86W50 562 aaKnown RBP13.76□□□□□ -0.21
LRFN3-204ENST00000588831 GBP3Q9H0R5 595 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 ANGEL1Q9UNK9 670 aaKnown RBP13.76□□□□□ -0.21
LRFN3-204ENST00000588831 PCDHB6Q9Y5E3 794 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 MBD4O95243 580 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 TSGA10IPQ3SY00 556 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 CDC5LQ99459 802 aaKnown RBP13.76□□□□□ -0.21
LRFN3-204ENST00000588831 VPS54Q9P1Q0 977 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 TRMT112Q9UI30 125 aaKnown RBP13.76□□□□□ -0.21
LRFN3-204ENST00000588831 FAM169AQ9Y6X4 670 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
LRFN3-204ENST00000588831 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 MCAMP43121 646 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
LRFN3-204ENST00000588831 ZNF174Q15697 407 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 RPUSD2Q8IZ73 545 aaKnown RBP13.76□□□□□ -0.21
LRFN3-204ENST00000588831 JMYQ8N9B5 988 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 CABS1Q96KC9 395 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
LRFN3-204ENST00000588831 RANBP1P43487 201 aa13.75□□□□□ -0.21
LRFN3-204ENST00000588831 SSRP1Q08945 709 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms