RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 IFIT1BQ5T764 474 aaKnown RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 TMC6Q7Z403 805 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 FILIP1Q7Z7B0 1213 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 RAB11FIP4Q86YS3 637 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 CTCFLQ8NI51 663 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 SMARCE1Q969G3 411 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 NLRP3Q96P20 1036 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 ZSCAN10Q96SZ4 725 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 SEC31BQ9NQW1 1179 aa8.21□□□□□ -1.1
SPIDR-228ENST00000588781 FAM217BQ9NTX9 383 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 CGNQ9P2M7 1197 aaKnown RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 ARPP21Q9UBL0 812 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 SRPRBQ9Y5M8 271 aaKnown RBP8.21□□□□□ -1.1
SPIDR-228ENST00000588781 MINDY4BA8MYZ0 360 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 RIOK3O14730 519 aaKnown RBP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 ZSCAN12O43309 604 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 RANBP6O60518 1105 aaKnown RBP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 WDHD1O75717 1129 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 CALML3P27482 149 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 UBASH3AP57075 661 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 LRMPQ12912 555 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 SEMA3FQ13275 785 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 ITPK1Q13572 414 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 POSTNQ15063 836 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 DPCR1Q3MIW9 517 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 SHC4Q6S5L8 630 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 MARCH10Q8NA82 808 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 NUP133Q8WUM0 1156 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 ACSBG1Q96GR2 724 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 C16orf45Q96MC5 204 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 CCDC94Q9BW85 323 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 GTPBP4Q9BZE4 634 aaKnown RBP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 XPO4Q9C0E2 1151 aaKnown RBP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 ZNF287Q9HBT7 754 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 AATFQ9NY61 560 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPIDR-228ENST00000588781 IFNKQ9P0W0 207 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 ABCF2Q9UG63 623 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 NRBP1Q9UHY1 535 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 TNKSO95271 1327 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 CASZ1Q86V15 1759 aa8.2□□□□□ -1.1
SPIDR-228ENST00000588781 PPFIA3O75145 1194 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 ZPR1O75312 459 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 TRIM37O94972 964 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 APBA3O96018 575 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 LDHCP07864 332 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 FGRP09769 529 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 TOP1P11387 765 aaKnown RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 RXRAP19793 462 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 HIBADHP31937 336 aaKnown RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 TXLNAP40222 546 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 RPS8P62241 208 aaKnown RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 CCZ1BP86790 482 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 CCZ1P86791 482 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 SEC23AQ15436 765 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 CCDC144BQ3MJ40 725 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 CFAP100Q494V2 611 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 SBK1Q52WX2 424 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 NT5DC1Q5TFE4 455 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 TPTE2Q6XPS3 522 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 FAM196AQ6ZSG2 479 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 FBXO33Q7Z6M2 555 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 NBPF11Q86T75 865 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 CCAR2Q8N163 923 aaKnown RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 C17orf53Q8N3J3 647 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 ENOX1Q8TC92 643 aaKnown RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 ERO1AQ96HE7 468 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 CTAGE1Q96RT6 745 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 FEZ1Q99689 392 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 SRRTQ9BXP5 876 aaKnown RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 BCL2L12Q9HB09 334 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 NARFQ9UHQ1 456 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 IQSEC3Q9UPP2 1182 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-228ENST00000588781 MROH7-TTC4A0A0A0MT08 1334 aa8.19□□□□□ -1.1
SPIDR-228ENST00000588781 KAT6BQ8WYB5 2073 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 DUOX1Q9NRD9 1551 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 SCN7AQ01118 1682 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 COL5A3P25940 1745 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-228ENST00000588781 MAST2Q6P0Q8 1798 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 BTBD18B2RXH4 712 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 BIN1O00499 593 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 PRKAB2O43741 272 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 RPS6KA4O75676 772 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 BAG3O95817 575 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 TPM1P09493 284 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 CDK11BP21127 795 aaKnown RBP8.18□□□□□ -1.1
SPIDR-228ENST00000588781 NCAPHQ15003 741 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 FILIP1LQ4L180 1135 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 GALNT17Q6IS24 598 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 NYAP1Q6ZVC0 841 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 NBPF5PQ86XG9 351 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-228ENST00000588781 MIGA1Q8NAN2 632 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 ANKRD20A12PQ8NF67 263 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 WDR66Q8TBY9 1149 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 ANKRD7Q92527 254 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 AIFM3Q96NN9 605 aa8.18□□□□□ -1.1
SPIDR-228ENST00000588781 LZTS2Q9BRK4 669 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms