RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 SPP2Q13103 211 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 CCDC84Q86UT8 332 aaPredicted RBP12.65□□□□□ -0.38
TPM4-209ENST00000588483 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 EXOC6Q8TAG9 804 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 CD99L2Q8TCZ2 262 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 SDR42E1Q8WUS8 393 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 APPBP2Q92624 585 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
TPM4-209ENST00000588483 ARMT1Q9H993 441 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 MCM9Q9NXL9 1143 aa12.65□□□□□ -0.38
TPM4-209ENST00000588483 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
TPM4-209ENST00000588483 C19orf81C9J6K1 198 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
TPM4-209ENST00000588483 GDF11O95390 407 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 GNRH1P01148 92 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 POLR3DP05423 398 aaPredicted RBP12.64□□□□□ -0.39
TPM4-209ENST00000588483 BCRP11274 1271 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 BACE1P56817 501 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 LACTBP83111 547 aaPredicted RBP12.64□□□□□ -0.39
TPM4-209ENST00000588483 ARHGEF6Q15052 776 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
TPM4-209ENST00000588483 ANKRD45Q5TZF3 282 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 GIMAP6Q6P9H5 292 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 STRBPQ96SI9 672 aaKnown RBP12.64□□□□□ -0.39
TPM4-209ENST00000588483 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 TRIM17Q9Y577 477 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 MYH8P13535 1937 aa12.64□□□□□ -0.39
TPM4-209ENST00000588483 PRKAB2O43741 272 aa12.63□□□□□ -0.39
TPM4-209ENST00000588483 RGS19P49795 217 aa12.63□□□□□ -0.39
TPM4-209ENST00000588483 PDE1AP54750 535 aa12.63□□□□□ -0.39
TPM4-209ENST00000588483 SHROOM1Q2M3G4 852 aaPredicted RBP12.63□□□□□ -0.39
TPM4-209ENST00000588483 CERKLQ49MI3 558 aaPredicted RBP12.63□□□□□ -0.39
TPM4-209ENST00000588483 C12orf60Q5U649 245 aa12.63□□□□□ -0.39
TPM4-209ENST00000588483 OSBP2Q969R2 916 aa12.63□□□□□ -0.39
TPM4-209ENST00000588483 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
TPM4-209ENST00000588483 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
TPM4-209ENST00000588483 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
TPM4-209ENST00000588483 ZSWIM8A7E2V4 1837 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 MGAMO43451 1857 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 USP17L10C9JJH3 530 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 CAPN15O75808 1086 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 GH2P01242 217 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 IGHDP01880 384 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 CYP2C8P10632 490 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
TPM4-209ENST00000588483 HMGCS2P54868 508 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 PABPC4Q13310 644 aaKnown RBP eCLIP12.62□□□□□ -0.39
TPM4-209ENST00000588483 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 SBK1Q52WX2 424 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 TREML2Q5T2D2 321 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 GADL1Q6ZQY3 521 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 C12orf42Q96LP6 360 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 ARPP21Q9UBL0 812 aaPredicted RBP12.62□□□□□ -0.39
TPM4-209ENST00000588483 SLC4A4Q9Y6R1 1079 aa12.62□□□□□ -0.39
TPM4-209ENST00000588483 GREB1LQ9C091 1923 aaPredicted RBP12.61□□□□□ -0.39
TPM4-209ENST00000588483 GSG1L2A8MUP6 293 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 GNAT2P19087 354 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 PRMT2P55345 433 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 NUCB1Q02818 461 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 EVX2Q03828 476 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 MTMR2Q13614 643 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 ABCB5Q2M3G0 1257 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 ZMYM1Q5SVZ6 1142 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 CTR9Q6PD62 1173 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 C16orf86Q6ZW13 317 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 CPA4Q9UI42 421 aa12.61□□□□□ -0.39
TPM4-209ENST00000588483 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
TPM4-209ENST00000588483 CCDC85CA6NKD9 419 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 USP17L21D6R901 530 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 GPAA1O43292 621 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 CYP2D6P10635 497 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 CTGFP29279 349 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 KIF22Q14807 665 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 ARMC5Q96C12 935 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 EVI5LQ96CN4 794 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 ARHGAP39Q9C0H5 1083 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 KIAA1683Q9H0B3 1180 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
TPM4-209ENST00000588483 M0R2C6 588 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 GCLCP48506 637 aaPredicted RBP12.59□□□□□ -0.39
TPM4-209ENST00000588483 USP14P54578 494 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 SMCR8Q8TEV9 937 aaPredicted RBP12.59□□□□□ -0.39
TPM4-209ENST00000588483 TRIM47Q96LD4 638 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 CCDC17Q96LX7 622 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 FSD1Q9BTV5 496 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
TPM4-209ENST00000588483 ASCC2Q9H1I8 757 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms