RNA–Protein interactions for RNA: ENST00000588352.5

GHDC-208, Transcript of GH3 domain containing, humanhuman

TSL 5

Gene GHDC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-208ENST00000588352 IGF2BP3O00425 579 aaKnown RBP eCLIP20.42■□□□□ 0.86
GHDC-208ENST00000588352 HSPA8P11142 646 aaKnown RBP20.42■□□□□ 0.86
GHDC-208ENST00000588352 TDO2P48775 406 aa20.42■□□□□ 0.86
GHDC-208ENST00000588352 EVX2Q03828 476 aa20.42■□□□□ 0.86
GHDC-208ENST00000588352 CCL15Q16663 113 aa20.42■□□□□ 0.86
GHDC-208ENST00000588352 ZCCHC17Q9NP64 241 aaKnown RBP20.42■□□□□ 0.86
GHDC-208ENST00000588352 AFG3L2Q9Y4W6 797 aa20.42■□□□□ 0.86
GHDC-208ENST00000588352 CCDC171Q6TFL3 1326 aa20.42■□□□□ 0.86
GHDC-208ENST00000588352 PCNTO95613 3336 aa20.41■□□□□ 0.86
GHDC-208ENST00000588352 FOXP2O15409 715 aa20.41■□□□□ 0.86
GHDC-208ENST00000588352 MFAP1P55081 439 aaKnown RBP20.41■□□□□ 0.86
GHDC-208ENST00000588352 OTUD7BQ6GQQ9 843 aa20.41■□□□□ 0.86
GHDC-208ENST00000588352 CCDC129Q6ZRS4 1044 aa20.41■□□□□ 0.86
GHDC-208ENST00000588352 C16orf86Q6ZW13 317 aa20.41■□□□□ 0.86
GHDC-208ENST00000588352 IFNL3Q8IZI9 196 aa20.41■□□□□ 0.86
GHDC-208ENST00000588352 ZMYM6O95789 1325 aa20.41■□□□□ 0.86
GHDC-208ENST00000588352 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 A0A0G2JLL6 359 aaPredicted RBP20.4■□□□□ 0.86
GHDC-208ENST00000588352 USP17L5A8MUK1 530 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 GDF11O95390 407 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 MYH1P12882 1939 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 CERKLQ49MI3 558 aaPredicted RBP20.4■□□□□ 0.86
GHDC-208ENST00000588352 PRRT2Q7Z6L0 340 aaPredicted RBP20.4■□□□□ 0.86
GHDC-208ENST00000588352 ZNF589Q86UQ0 364 aaPredicted RBP20.4■□□□□ 0.86
GHDC-208ENST00000588352 PTPN18Q99952 460 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 WDR18Q9BV38 432 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 NAPBQ9H115 298 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 AS3MTQ9HBK9 375 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 PPP4R2Q9NY27 417 aa20.4■□□□□ 0.86
GHDC-208ENST00000588352 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.4■□□□□ 0.86
GHDC-208ENST00000588352 AK9Q5TCS8 1911 aa20.39■□□□□ 0.86
GHDC-208ENST00000588352 RAD50Q92878 1312 aa20.39■□□□□ 0.85
GHDC-208ENST00000588352 APPP05067 770 aa20.39■□□□□ 0.85
GHDC-208ENST00000588352 JAG1P78504 1218 aa20.39■□□□□ 0.85
GHDC-208ENST00000588352 NOM1Q5C9Z4 860 aaKnown RBP20.39■□□□□ 0.85
GHDC-208ENST00000588352 SLC44A5Q8NCS7 719 aa20.39■□□□□ 0.85
GHDC-208ENST00000588352 ZNF280CQ8ND82 737 aa20.39■□□□□ 0.85
GHDC-208ENST00000588352 TRPA1O75762 1119 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 GH2P01242 217 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 MOGSQ13724 837 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 ALX1Q15699 326 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 ABCB5Q2M3G0 1257 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 SHROOM1Q2M3G4 852 aaPredicted RBP20.38■□□□□ 0.85
GHDC-208ENST00000588352 VPS53Q5VIR6 699 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 CCDC84Q86UT8 332 aaPredicted RBP20.38■□□□□ 0.85
GHDC-208ENST00000588352 DYNLL2Q96FJ2 89 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 CCDC17Q96LX7 622 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 PRDM10Q9NQV6 1147 aa20.38■□□□□ 0.85
GHDC-208ENST00000588352 TRIM75PA6NK02 468 aa20.37■□□□□ 0.85
GHDC-208ENST00000588352 CDK8P49336 464 aa20.37■□□□□ 0.85
GHDC-208ENST00000588352 BMP2KLQ5H9B9 411 aa20.37■□□□□ 0.85
GHDC-208ENST00000588352 FASTKD5Q7L8L6 764 aaKnown RBP20.37■□□□□ 0.85
GHDC-208ENST00000588352 ANKRD23Q86SG2 305 aa20.37■□□□□ 0.85
GHDC-208ENST00000588352 BTBD19C9JJ37 291 aa20.36■□□□□ 0.85
GHDC-208ENST00000588352 SMIM22K7EJ46 135 aa20.36■□□□□ 0.85
GHDC-208ENST00000588352 SH3D19Q5HYK7 790 aa20.36■□□□□ 0.85
GHDC-208ENST00000588352 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
GHDC-208ENST00000588352 TMEM179Q6ZVK1 233 aa20.36■□□□□ 0.85
GHDC-208ENST00000588352 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
GHDC-208ENST00000588352 ZNF287Q9HBT7 754 aa20.36■□□□□ 0.85
GHDC-208ENST00000588352 CABP5Q9NP86 173 aa20.36■□□□□ 0.85
GHDC-208ENST00000588352 MINDY4BA8MYZ0 360 aa20.35■□□□□ 0.85
GHDC-208ENST00000588352 HSPD1P10809 573 aaKnown RBP20.35■□□□□ 0.85
GHDC-208ENST00000588352 LBX1P52954 281 aa20.35■□□□□ 0.85
GHDC-208ENST00000588352 PPARAQ07869 468 aa20.35■□□□□ 0.85
GHDC-208ENST00000588352 SPP2Q13103 211 aa20.35■□□□□ 0.85
GHDC-208ENST00000588352 PROCA1Q8NCQ7 364 aaPredicted RBP20.35■□□□□ 0.85
GHDC-208ENST00000588352 TSKSQ9UJT2 592 aa20.35■□□□□ 0.85
GHDC-208ENST00000588352 SLC45A1Q9Y2W3 748 aa20.35■□□□□ 0.85
GHDC-208ENST00000588352 SLC3A2P08195 630 aaKnown RBP20.34■□□□□ 0.85
GHDC-208ENST00000588352 CHMLP26374 656 aa20.34■□□□□ 0.85
GHDC-208ENST00000588352 BACE1P56817 501 aa20.34■□□□□ 0.85
GHDC-208ENST00000588352 RUFY2Q8WXA3 655 aa20.34■□□□□ 0.85
GHDC-208ENST00000588352 ANAPC4Q9UJX5 808 aa20.34■□□□□ 0.85
GHDC-208ENST00000588352 PHIPQ8WWQ0 1821 aa20.33■□□□□ 0.85
GHDC-208ENST00000588352 ATAD5Q96QE3 1844 aa20.33■□□□□ 0.85
GHDC-208ENST00000588352 GUCY1A2P33402 732 aa20.33■□□□□ 0.85
GHDC-208ENST00000588352 CRHR2Q13324 411 aa20.33■□□□□ 0.85
GHDC-208ENST00000588352 MTMR2Q13614 643 aa20.33■□□□□ 0.85
GHDC-208ENST00000588352 RAB3GAP1Q15042 981 aa20.33■□□□□ 0.85
GHDC-208ENST00000588352 GPAT2Q6NUI2 795 aa20.33■□□□□ 0.85
GHDC-208ENST00000588352 AGTPBP1Q9UPW5 1226 aa20.33■□□□□ 0.85
GHDC-208ENST00000588352 PLIN4Q96Q06 1357 aa20.33■□□□□ 0.84
GHDC-208ENST00000588352 LOC285556D6RIA3 1793 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 C19orf81C9J6K1 198 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 USP17L10C9JJH3 530 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 MPHOSPH10O00566 681 aaKnown RBP20.32■□□□□ 0.84
GHDC-208ENST00000588352 AKR1B1P15121 316 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 RASA1P20936 1047 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 PDE4BQ07343 736 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 TAF1CQ15572 869 aaPredicted RBP20.32■□□□□ 0.84
GHDC-208ENST00000588352 SKAP1Q86WV1 359 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 DSCC1Q9BVC3 393 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 KIAA1683Q9H0B3 1180 aa20.32■□□□□ 0.84
GHDC-208ENST00000588352 BAZ2AQ9UIF9 1905 aaKnown RBP20.31■□□□□ 0.84
GHDC-208ENST00000588352 PDHXO00330 501 aa20.31■□□□□ 0.84
GHDC-208ENST00000588352 TBC1D8O95759 1140 aa20.31■□□□□ 0.84
GHDC-208ENST00000588352 FGAP02671 866 aa20.31■□□□□ 0.84
GHDC-208ENST00000588352 HMGCS2P54868 508 aa20.31■□□□□ 0.84
GHDC-208ENST00000588352 SEPT2Q15019 361 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms