RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 ERC1Q8IUD2 1116 aa19.44■□□□□ 0.7
ERCC1-206ENST00000588300 DPF3Q92784 378 aa19.44■□□□□ 0.7
ERCC1-206ENST00000588300 TMOD4Q9NZQ9 345 aa19.44■□□□□ 0.7
ERCC1-206ENST00000588300 COLQQ9Y215 455 aaPredicted RBP19.44■□□□□ 0.7
ERCC1-206ENST00000588300 CEP290O15078 2479 aa19.44■□□□□ 0.7
ERCC1-206ENST00000588300 FARP2O94887 1054 aaPredicted RBP19.43■□□□□ 0.7
ERCC1-206ENST00000588300 CAPN2P17655 700 aa19.43■□□□□ 0.7
ERCC1-206ENST00000588300 IRX3P78415 501 aaPredicted RBP19.43■□□□□ 0.7
ERCC1-206ENST00000588300 SAP30BPQ9UHR5 308 aaKnown RBP19.43■□□□□ 0.7
ERCC1-206ENST00000588300 ZBED9Q6R2W3 1325 aa19.43■□□□□ 0.7
ERCC1-206ENST00000588300 C19orf81C9J6K1 198 aa19.42■□□□□ 0.7
ERCC1-206ENST00000588300 GDF11O95390 407 aa19.42■□□□□ 0.7
ERCC1-206ENST00000588300 JAG1P78504 1218 aa19.42■□□□□ 0.7
ERCC1-206ENST00000588300 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
ERCC1-206ENST00000588300 EXOC6BQ9Y2D4 811 aa19.42■□□□□ 0.7
ERCC1-206ENST00000588300 USP17L10C9JJH3 530 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 HOXA7P31268 230 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-206ENST00000588300 USP5P45974 858 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 MAP3K12Q12852 859 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 DIEXFQ68CQ4 756 aaKnown RBP19.41■□□□□ 0.7
ERCC1-206ENST00000588300 TMED8Q6PL24 325 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-206ENST00000588300 AACSQ86V21 672 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 MAGEB6Q8N7X4 407 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 MIGA1Q8NAN2 632 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 PANK1Q8TE04 598 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 DEFB118Q96PH6 123 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 MORF4L1Q9UBU8 362 aa19.41■□□□□ 0.7
ERCC1-206ENST00000588300 FXR1P51114 621 aaKnown RBP eCLIP19.4■□□□□ 0.7
ERCC1-206ENST00000588300 SHROOM1Q2M3G4 852 aaPredicted RBP19.4■□□□□ 0.7
ERCC1-206ENST00000588300 HSP90AB4PQ58FF6 505 aa19.4■□□□□ 0.7
ERCC1-206ENST00000588300 PAK6Q9NQU5 681 aaPredicted RBP19.4■□□□□ 0.7
ERCC1-206ENST00000588300 NDUFB9Q9Y6M9 179 aa19.4■□□□□ 0.7
ERCC1-206ENST00000588300 TFRCP02786 760 aaKnown RBP19.39■□□□□ 0.69
ERCC1-206ENST00000588300 HMGCRP04035 888 aa19.39■□□□□ 0.69
ERCC1-206ENST00000588300 MS4A1P11836 297 aa19.39■□□□□ 0.69
ERCC1-206ENST00000588300 P2RX7Q99572 595 aaKnown RBP19.39■□□□□ 0.69
ERCC1-206ENST00000588300 ANTXR1Q9H6X2 564 aa19.39■□□□□ 0.69
ERCC1-206ENST00000588300 PLXNB2O15031 1838 aa19.39■□□□□ 0.69
ERCC1-206ENST00000588300 HERVK_113P62684 666 aa19.38■□□□□ 0.69
ERCC1-206ENST00000588300 CHRDL2Q6WN34 429 aa19.38■□□□□ 0.69
ERCC1-206ENST00000588300 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.38■□□□□ 0.69
ERCC1-206ENST00000588300 GJD2Q9UKL4 321 aa19.38■□□□□ 0.69
ERCC1-206ENST00000588300 NR2E3Q9Y5X4 410 aa19.38■□□□□ 0.69
ERCC1-206ENST00000588300 GH2P01242 217 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 TTC6Q86TZ1 520 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 GPRC5AQ8NFJ5 357 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 RHPN1Q8TCX5 695 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 GTF3C2Q8WUA4 911 aaPredicted RBP19.37■□□□□ 0.69
ERCC1-206ENST00000588300 CRISPLD2Q9H0B8 497 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 EHD4Q9H223 541 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 IL1RAPL2Q9NP60 686 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 SERPINB13Q9UIV8 391 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 NAV1Q8NEY1 1877 aa19.37■□□□□ 0.69
ERCC1-206ENST00000588300 DDX60LQ5H9U9 1706 aaKnown RBP19.37■□□□□ 0.69
ERCC1-206ENST00000588300 TTF1Q15361 905 aaPredicted RBP19.36■□□□□ 0.69
ERCC1-206ENST00000588300 TATDN1Q6P1N9 297 aa19.36■□□□□ 0.69
ERCC1-206ENST00000588300 RPTORQ8N122 1335 aa19.35■□□□□ 0.69
ERCC1-206ENST00000588300 SOCS4Q8WXH5 440 aa19.35■□□□□ 0.69
ERCC1-206ENST00000588300 FEZ1Q99689 392 aa19.35■□□□□ 0.69
ERCC1-206ENST00000588300 TXNRD2Q9NNW7 524 aa19.35■□□□□ 0.69
ERCC1-206ENST00000588300 HMX1Q9NP08 348 aaPredicted RBP19.35■□□□□ 0.69
ERCC1-206ENST00000588300 EMILIN3Q9NT22 766 aa19.35■□□□□ 0.69
ERCC1-206ENST00000588300 TRIOBPQ9H2D6 2365 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 HMMRO75330 724 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 MAPK4P31152 587 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 ERVK-9P63128 1117 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 ERVK-24P63145 666 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 PDE3AQ14432 1141 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 CCAR1Q8IX12 1150 aaKnown RBP19.34■□□□□ 0.69
ERCC1-206ENST00000588300 RPAP2Q8IXW5 612 aaPredicted RBP19.34■□□□□ 0.69
ERCC1-206ENST00000588300 CLASRPQ8N2M8 674 aaKnown RBP19.34■□□□□ 0.69
ERCC1-206ENST00000588300 KIF1BPQ96EK5 621 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 C12orf42Q96LP6 360 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 NUDT12Q9BQG2 462 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 RIOK1Q9BRS2 568 aaKnown RBP19.34■□□□□ 0.69
ERCC1-206ENST00000588300 RBPJLQ9UBG7 517 aa19.34■□□□□ 0.69
ERCC1-206ENST00000588300 MAGEB6P1A0A0J9YX57 407 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 EVI5O60447 810 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 PEX10O60683 326 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 CYP2B6P20813 491 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 USP14P54578 494 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 RAB3GAP1Q15042 981 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 ABCB5Q2M3G0 1257 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 CERKLQ49MI3 558 aaPredicted RBP19.33■□□□□ 0.68
ERCC1-206ENST00000588300 ANKLE1Q8NAG6 615 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.33■□□□□ 0.68
ERCC1-206ENST00000588300 TRIB2Q92519 343 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 PAWRQ96IZ0 340 aaKnown RBP19.33■□□□□ 0.68
ERCC1-206ENST00000588300 PAGR1Q9BTK6 254 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 CABP5Q9NP86 173 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 DDX19BQ9UMR2 479 aa19.33■□□□□ 0.68
ERCC1-206ENST00000588300 APBB1O00213 710 aa19.32■□□□□ 0.68
ERCC1-206ENST00000588300 POLR3DP05423 398 aaPredicted RBP19.32■□□□□ 0.68
ERCC1-206ENST00000588300 XRCC5P13010 732 aaKnown RBP19.32■□□□□ 0.68
ERCC1-206ENST00000588300 TRIM32Q13049 653 aa19.32■□□□□ 0.68
ERCC1-206ENST00000588300 ZYXQ15942 572 aaKnown RBP19.32■□□□□ 0.68
ERCC1-206ENST00000588300 SLC9C2Q5TAH2 1124 aa19.32■□□□□ 0.68
ERCC1-206ENST00000588300 NECAB2Q7Z6G3 386 aa19.32■□□□□ 0.68
ERCC1-206ENST00000588300 CRNKL1Q9BZJ0 848 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms