RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CDKL5O76039 1030 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 LMNB1P20700 586 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 CDK8P49336 464 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 TFAP4Q01664 338 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 SCRN1Q12765 414 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 FKBP1CQ5VVH2 108 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 LARP1BQ659C4 914 aaKnown RBP12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 FAM184AQ8NB25 1140 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 SMARCC2Q8TAQ2 1214 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 ANKS1AQ92625 1134 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 PRMT6Q96LA8 375 aaPredicted RBP12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 GBP4Q96PP9 640 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 GOLGA8BA8MQT2 603 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 METAP2P50579 478 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 SEC23AQ15436 765 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 IFIT1BQ5T764 474 aaKnown RBP12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 APOA5Q6Q788 366 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 CATIPQ7Z7H3 387 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 RGS22Q8NE09 1264 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 DYNLL2Q96FJ2 89 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 CCDC17Q96LX7 622 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 ZKSCAN3Q9BRR0 538 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 EHD4Q9H223 541 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 SCN9AQ15858 1988 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 TNKSO95271 1327 aa12.28□□□□□ -0.44
CHMP1B-202ENST00000588284 BAZ2AQ9UIF9 1905 aaKnown RBP12.27□□□□□ -0.44
CHMP1B-202ENST00000588284 GOLGA8AA7E2F4 631 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 STX6O43752 255 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 BRD1O95696 1058 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 PTMSP20962 102 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 SYT1P21579 422 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 ZNF280AP59817 542 aaPredicted RBP12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 RASSF7Q02833 373 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 GABPAQ06546 454 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 ST3GAL1Q11201 340 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 CLEC17AQ6ZS10 378 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 ZSCAN29Q8IWY8 852 aaPredicted RBP12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 NEDD1Q8NHV4 660 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 TNPO1Q92973 898 aaKnown RBP12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 TRIM34Q9BYJ4 488 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 DDX4Q9NQI0 724 aaKnown RBP12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 ZNF70Q9UC06 446 aaPredicted RBP12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 ATP6V1DQ9Y5K8 247 aa12.27□□□□□ -0.45
CHMP1B-202ENST00000588284 UTRNP46939 3433 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 PSME4Q14997 1843 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 ARFGEF1Q9Y6D6 1849 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 H7C1D1 291 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 SMIM22K7EJ46 135 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 RASA1P20936 1047 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 TNNI2P48788 182 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 NFIAQ12857 509 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 ZNF654Q8IZM8 581 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 CRACR2BQ8N4Y2 399 aaPredicted RBP12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 ENAHQ8N8S7 591 aaPredicted RBP12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 NSUN7Q8NE18 718 aaKnown RBP12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 FAM151AQ8WW52 585 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 MAP3K14Q99558 947 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 RBM28Q9NW13 759 aaKnown RBP12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 FAM198AQ9UFP1 575 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 HPS5Q9UPZ3 1129 aa12.26□□□□□ -0.45
CHMP1B-202ENST00000588284 PTPDC1A2A3K4 754 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 DDAH1O94760 285 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 ZSCAN22P10073 491 aaPredicted RBP12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 NFKBIBQ15653 356 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 RTN1Q16799 776 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 SLC4A8Q2Y0W8 1093 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 FAM83AQ86UY5 434 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 WASF1Q92558 559 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 ZBED3Q96IU2 234 aaPredicted RBP12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 KAT14Q9H8E8 782 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 NCOA5Q9HCD5 579 aaKnown RBP12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 MYOZ2Q9NPC6 264 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 CNOT7Q9UIV1 285 aaKnown RBP12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 GJA3Q9Y6H8 435 aa12.25□□□□□ -0.45
CHMP1B-202ENST00000588284 H3BQV1 296 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 CTDNEP1O95476 244 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 COL2A1P02458 1487 aaPredicted RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 COL4A5P29400 1685 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 KIF5BP33176 963 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 ADD1P35611 737 aaKnown RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 GMPSP49915 693 aaPredicted RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 GNAQP50148 359 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 EVX2Q03828 476 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 SSRP1Q08945 709 aaKnown RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 TCP10Q12799 353 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 NID2Q14112 1375 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms